RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 C8orf37Q96NL8 207 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 CRBNQ96SW2 442 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 PRKD2Q9BZL6 878 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.51□□□□□ -1.21
MSI2-219ENST00000584476 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 DISP2A7MBM2 1401 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 SPATA31A6Q5VVP1 1343 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 ADAMTS7Q9UKP4 1686 aa7.51□□□□□ -1.21
MSI2-219ENST00000584476 PARP4Q9UKK3 1724 aaKnown RBP7.5□□□□□ -1.21
MSI2-219ENST00000584476 BTBD11A6QL63 1104 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 GFRA3O60609 400 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 ALDH1L2Q3SY69 923 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 SMYD5Q6GMV2 418 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.5□□□□□ -1.21
MSI2-219ENST00000584476 DDX54Q8TDD1 881 aaKnown RBP7.5□□□□□ -1.21
MSI2-219ENST00000584476 PANK1Q8TE04 598 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 DCAF5Q96JK2 942 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 PRR14Q9BWN1 585 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 BABAM1Q9NWV8 329 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 SPATA31A1Q5TZJ5 1347 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 PCDH11XQ9BZA7 1347 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 PCDH11YQ9BZA8 1340 aa7.5□□□□□ -1.21
MSI2-219ENST00000584476 BCL9LQ86UU0 1499 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 CANXP27824 592 aaKnown RBP7.49□□□□□ -1.21
MSI2-219ENST00000584476 EIF4A1P60842 406 aaKnown RBP7.49□□□□□ -1.21
MSI2-219ENST00000584476 ERICH6BQ5W0A0 696 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 UNC5CLQ8IV45 518 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 ZNF428Q96B54 188 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 SLC52A2Q9HAB3 445 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
MSI2-219ENST00000584476 SPATA31A5Q5VU36 1347 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 SPATA31A7Q8IWB4 1347 aa7.49□□□□□ -1.21
MSI2-219ENST00000584476 HSP90AB1P08238 724 aaKnown RBP7.48□□□□□ -1.21
MSI2-219ENST00000584476 RLBP1P12271 317 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 GGCXP38435 758 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 PTGDRQ13258 359 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 ZKSCAN2Q63HK3 967 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 FNBP4Q8N3X1 1017 aaPredicted RBP7.48□□□□□ -1.21
MSI2-219ENST00000584476 NFATC2IPQ8NCF5 419 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 CLUAP1Q96AJ1 413 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 SHANK3Q9BYB0 1731 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 PPP4R2Q9NY27 417 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 CCDC9Q9Y3X0 531 aaKnown RBP7.48□□□□□ -1.21
MSI2-219ENST00000584476 MRC1P22897 1456 aa7.48□□□□□ -1.21
MSI2-219ENST00000584476 NWD2Q9ULI1 1742 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 SIPA1L3O60292 1781 aaPredicted RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 KDM3BQ7LBC6 1761 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 SCN11AQ9UI33 1791 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 NRG2O14511 850 aaPredicted RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 SEMA3EO15041 775 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 TRIM27P14373 513 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 MLLT3P42568 568 aaPredicted RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 BRPF1P55201 1214 aaPredicted RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 CABP4P57796 275 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 SLC39A6Q13433 755 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 PDE3AQ14432 1141 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 VPS72Q15906 364 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 MEX3CQ5U5Q3 659 aaKnown RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 NKX2-3Q8TAU0 364 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 TMUB1Q9BVT8 246 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 USP21Q9UK80 565 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 COG6Q9Y2V7 657 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 THRAP3Q9Y2W1 955 aaKnown RBP7.47□□□□□ -1.21
MSI2-219ENST00000584476 KIF16BQ96L93 1317 aa7.47□□□□□ -1.21
MSI2-219ENST00000584476 TNS2Q63HR2 1409 aa7.46□□□□□ -1.21
MSI2-219ENST00000584476 PRAMEF22A3QJZ6 481 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 EXOC5O00471 708 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 ZPR1O75312 459 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 PRKCSHP14314 528 aaPredicted RBP7.46□□□□□ -1.22
MSI2-219ENST00000584476 ZNF790Q6PG37 636 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 ATF7IPQ6VMQ6 1270 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 BARGINQ6ZT62 677 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 CDCA7Q9BWT1 371 aaPredicted RBP7.46□□□□□ -1.22
MSI2-219ENST00000584476 HEG1Q9ULI3 1381 aa7.46□□□□□ -1.22
MSI2-219ENST00000584476 WNK3Q9BYP7 1800 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 ERVV-2B6SEH9 535 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 IPO8O15397 1037 aaKnown RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 GIGYF1O75420 1035 aaPredicted RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 DNAJB2P25686 324 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 COPS2P61201 443 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 DDB1Q16531 1140 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 G2E3Q7L622 706 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 DZIP1LQ8IYY4 767 aaKnown RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 ZNF496Q96IT1 587 aaPredicted RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 AFF2P51816 1311 aa7.45□□□□□ -1.22
MSI2-219ENST00000584476 SOS1Q07889 1333 aaPredicted RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 VIRMAQ69YN4 1812 aaKnown RBP7.45□□□□□ -1.22
MSI2-219ENST00000584476 TOGARAM1Q9Y4F4 1720 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 LCE2BO14633 110 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 HOXB7P09629 217 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 EIF2S2P20042 333 aaKnown RBP7.44□□□□□ -1.22
MSI2-219ENST00000584476 HDGFL1Q5TGJ6 251 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 FTSJ3Q8IY81 847 aaKnown RBP7.44□□□□□ -1.22
MSI2-219ENST00000584476 TMEM57Q8N5G2 664 aa7.44□□□□□ -1.22
MSI2-219ENST00000584476 MARCH10Q8NA82 808 aaPredicted RBP7.44□□□□□ -1.22
MSI2-219ENST00000584476 RBM46Q8TBY0 533 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms