RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 SMIM5Q71RC9 77 aa21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 NLRP10Q86W26 655 aa21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 BCL2L12Q9HB09 334 aa21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 SRP68Q9UHB9 627 aaKnown RBP21■□□□□ 0.95
CDK5RAP3-230ENST00000584042 NBPF7P0C2Y1 421 aaPredicted RBP20.99■□□□□ 0.95
CDK5RAP3-230ENST00000584042 PNPLA7Q6ZV29 1317 aa20.99■□□□□ 0.95
CDK5RAP3-230ENST00000584042 GPTP24298 496 aa20.98■□□□□ 0.95
CDK5RAP3-230ENST00000584042 MYH3P11055 1940 aa20.98■□□□□ 0.95
CDK5RAP3-230ENST00000584042 CASP7P55210 303 aa20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 C1orf115Q9H7X2 142 aa20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 NIP7Q9Y221 180 aaKnown RBP eCLIP20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 PCDHB15Q9Y5E8 787 aa20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 DDX60Q8IY21 1712 aaKnown RBP20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 CDHR2Q9BYE9 1310 aa20.97■□□□□ 0.95
CDK5RAP3-230ENST00000584042 H7C1W4 665 aa20.96■□□□□ 0.95
CDK5RAP3-230ENST00000584042 PCCAP05165 728 aaPredicted RBP20.96■□□□□ 0.95
CDK5RAP3-230ENST00000584042 CCDC136Q96JN2 1154 aa20.96■□□□□ 0.95
CDK5RAP3-230ENST00000584042 LRRFIP2Q9Y608 721 aaKnown RBP20.96■□□□□ 0.95
CDK5RAP3-230ENST00000584042 GYS1P13807 737 aa20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 UBE3BQ7Z3V4 1068 aa20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 COL23A1Q86Y22 540 aaPredicted RBP20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 ZBTB38Q8NAP3 1195 aaPredicted RBP20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 CARMIL3Q8ND23 1372 aa20.95■□□□□ 0.94
CDK5RAP3-230ENST00000584042 TBC1D9BQ66K14 1250 aa20.94■□□□□ 0.94
CDK5RAP3-230ENST00000584042 RPAP2Q8IXW5 612 aaPredicted RBP20.94■□□□□ 0.94
CDK5RAP3-230ENST00000584042 ANKRD44Q8N8A2 993 aa20.94■□□□□ 0.94
CDK5RAP3-230ENST00000584042 SUCLG2Q96I99 432 aa20.94■□□□□ 0.94
CDK5RAP3-230ENST00000584042 CASZ1Q86V15 1759 aa20.94■□□□□ 0.94
CDK5RAP3-230ENST00000584042 NRXN2Q9P2S2 1712 aa20.93■□□□□ 0.94
CDK5RAP3-230ENST00000584042 NTSR2O95665 410 aa20.93■□□□□ 0.94
CDK5RAP3-230ENST00000584042 HDAC1Q13547 482 aaPredicted RBP20.93■□□□□ 0.94
CDK5RAP3-230ENST00000584042 PPP1R42Q7Z4L9 355 aa20.93■□□□□ 0.94
CDK5RAP3-230ENST00000584042 MTX1Q13505 466 aa20.92■□□□□ 0.94
CDK5RAP3-230ENST00000584042 B4GALNT3Q6L9W6 998 aa20.92■□□□□ 0.94
CDK5RAP3-230ENST00000584042 UTP14AQ9BVJ6 771 aaKnown RBP20.92■□□□□ 0.94
CDK5RAP3-230ENST00000584042 PLA2G12BQ9BX93 195 aa20.92■□□□□ 0.94
CDK5RAP3-230ENST00000584042 SH3TC1Q8TE82 1336 aa20.92■□□□□ 0.94
CDK5RAP3-230ENST00000584042 RIC1Q4ADV7 1423 aa20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 SUSD4Q5VX71 490 aa20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 KAZALD1Q96I82 304 aa20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 SETDB2Q96T68 719 aa20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 NYXQ9GZU5 481 aa20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 TRMT112Q9UI30 125 aaKnown RBP20.91■□□□□ 0.94
CDK5RAP3-230ENST00000584042 KDM2BQ8NHM5 1336 aa20.9■□□□□ 0.94
CDK5RAP3-230ENST00000584042 HMMRO75330 724 aa20.9■□□□□ 0.94
CDK5RAP3-230ENST00000584042 NFIXQ14938 502 aa20.9■□□□□ 0.94
CDK5RAP3-230ENST00000584042 RABL6Q3YEC7 729 aaPredicted RBP20.9■□□□□ 0.94
CDK5RAP3-230ENST00000584042 ILDR2Q71H61 639 aa20.9■□□□□ 0.94
CDK5RAP3-230ENST00000584042 HSP90B1P14625 803 aaKnown RBP20.89■□□□□ 0.93
CDK5RAP3-230ENST00000584042 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
CDK5RAP3-230ENST00000584042 RWDD1Q9H446 243 aaPredicted RBP20.89■□□□□ 0.93
CDK5RAP3-230ENST00000584042 BICC1Q9H694 974 aaKnown RBP20.89■□□□□ 0.93
CDK5RAP3-230ENST00000584042 BICDL1Q6ZP65 573 aa20.88■□□□□ 0.93
CDK5RAP3-230ENST00000584042 CENPQQ7L2Z9 268 aaPredicted RBP20.88■□□□□ 0.93
CDK5RAP3-230ENST00000584042 NLGN1Q8N2Q7 840 aa20.88■□□□□ 0.93
CDK5RAP3-230ENST00000584042 FAM89AQ96GI7 184 aa20.88■□□□□ 0.93
CDK5RAP3-230ENST00000584042 TNRC6CQ9HCJ0 1690 aaKnown RBP20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 LRP5O75197 1615 aa20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 MSH5O43196 834 aa20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 ATP8B2P98198 1209 aa20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 EPHA10Q5JZY3 1008 aa20.87■□□□□ 0.93
CDK5RAP3-230ENST00000584042 ABCC12Q96J65 1359 aa20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 TM4SF1P30408 202 aa20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 POLA2Q14181 598 aa20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 NBPF5PQ86XG9 351 aaPredicted RBP20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 SSH3Q8TE77 659 aa20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 JARID2Q92833 1246 aaPredicted RBP20.86■□□□□ 0.93
CDK5RAP3-230ENST00000584042 PNMA6EA0A0J9YXQ4 647 aa20.85■□□□□ 0.93
CDK5RAP3-230ENST00000584042 FOXO4P98177 505 aa20.85■□□□□ 0.93
CDK5RAP3-230ENST00000584042 RTL5Q5HYW3 569 aaPredicted RBP20.85■□□□□ 0.93
CDK5RAP3-230ENST00000584042 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 SRGAP3O43295 1099 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 PDE8AO60658 829 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 IGHDP01880 384 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 CTSWP56202 376 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 DDR1Q08345 913 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 TPTE2Q6XPS3 522 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 CNBD1Q8NA66 436 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 SLC16A10Q8TF71 515 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
CDK5RAP3-230ENST00000584042 FAM177BA6PVY3 158 aa20.83■□□□□ 0.93
CDK5RAP3-230ENST00000584042 ERFEQ4G0M1 354 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 SLC10A5Q5PT55 438 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 NUTM1Q86Y26 1132 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 SYNE4Q8N205 404 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 GCC1Q96CN9 775 aa20.82■□□□□ 0.92
CDK5RAP3-230ENST00000584042 ANKRD31Q8N7Z5 1873 aa20.81■□□□□ 0.92
CDK5RAP3-230ENST00000584042 SERPINB2P05120 415 aa20.81■□□□□ 0.92
CDK5RAP3-230ENST00000584042 CSF1RP07333 972 aa20.81■□□□□ 0.92
CDK5RAP3-230ENST00000584042 LMBR1LQ6UX01 489 aa20.81■□□□□ 0.92
CDK5RAP3-230ENST00000584042 GTF2E1P29083 439 aaPredicted RBP20.8■□□□□ 0.92
CDK5RAP3-230ENST00000584042 PRR5LQ6MZQ0 368 aa20.8■□□□□ 0.92
CDK5RAP3-230ENST00000584042 DCTPP1Q9H773 170 aa20.8■□□□□ 0.92
CDK5RAP3-230ENST00000584042 MMP10P09238 476 aa20.79■□□□□ 0.92
CDK5RAP3-230ENST00000584042 HCLS1P14317 486 aaPredicted RBP20.79■□□□□ 0.92
CDK5RAP3-230ENST00000584042 ST5P78524 1137 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms