RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 RBM17Q96I25 401 aaKnown RBP14.39□□□□□ -0.11
CCDC84-210ENST00000583842 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
CCDC84-210ENST00000583842 CHPF2Q9P2E5 772 aa14.39□□□□□ -0.11
CCDC84-210ENST00000583842 CCDC93Q567U6 631 aa14.38□□□□□ -0.11
CCDC84-210ENST00000583842 C8orf58Q8NAV2 365 aa14.38□□□□□ -0.11
CCDC84-210ENST00000583842 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
CCDC84-210ENST00000583842 GPTP24298 496 aa14.37□□□□□ -0.11
CCDC84-210ENST00000583842 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
CCDC84-210ENST00000583842 PSMD1Q99460 953 aa14.37□□□□□ -0.11
CCDC84-210ENST00000583842 DLEC1Q9Y238 1755 aa14.37□□□□□ -0.11
CCDC84-210ENST00000583842 VEGFAP15692 232 aaPredicted RBP14.36□□□□□ -0.11
CCDC84-210ENST00000583842 FKBP4Q02790 459 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCDC84-210ENST00000583842 TMC4Q7Z404 712 aa14.36□□□□□ -0.11
CCDC84-210ENST00000583842 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
CCDC84-210ENST00000583842 RPGRQ92834 1020 aaKnown RBP14.36□□□□□ -0.11
CCDC84-210ENST00000583842 SH3TC1Q8TE82 1336 aa14.36□□□□□ -0.11
CCDC84-210ENST00000583842 FAM177BA6PVY3 158 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 DDX58O95786 925 aaKnown RBP14.35□□□□□ -0.11
CCDC84-210ENST00000583842 ANXA1P04083 346 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 PRELPP51888 382 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 SF3B3Q15393 1217 aaKnown RBP14.35□□□□□ -0.11
CCDC84-210ENST00000583842 RBM46Q8TBY0 533 aaKnown RBP14.35□□□□□ -0.11
CCDC84-210ENST00000583842 NECTIN2Q92692 538 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 TRMT112Q9UI30 125 aaKnown RBP14.35□□□□□ -0.11
CCDC84-210ENST00000583842 NUP98P52948 1817 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 ANKRD31Q8N7Z5 1873 aa14.35□□□□□ -0.11
CCDC84-210ENST00000583842 FSTL1Q12841 308 aa14.34□□□□□ -0.11
CCDC84-210ENST00000583842 CCDC191Q8NCU4 936 aa14.34□□□□□ -0.11
CCDC84-210ENST00000583842 TMX4Q9H1E5 349 aaPredicted RBP14.34□□□□□ -0.11
CCDC84-210ENST00000583842 GOLGA2Q08379 1002 aa14.33□□□□□ -0.12
CCDC84-210ENST00000583842 RIC3Q7Z5B4 369 aa14.33□□□□□ -0.12
CCDC84-210ENST00000583842 SP8Q8IXZ3 490 aa14.33□□□□□ -0.12
CCDC84-210ENST00000583842 ATP6V0A2Q9Y487 856 aa14.33□□□□□ -0.12
CCDC84-210ENST00000583842 SBF1O95248 1867 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 ELL2O00472 640 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 RASSF7Q02833 373 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 TWISTNBQ3B726 338 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 TSPYL6Q8N831 410 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 ZBTB38Q8NAP3 1195 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 ZNF526Q8TF50 670 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 METTL22Q9BUU2 404 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 RTFDC1Q9BY42 306 aaPredicted RBP14.32□□□□□ -0.12
CCDC84-210ENST00000583842 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
CCDC84-210ENST00000583842 VAMP4O75379 141 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 SUPT20HQ8NEM7 779 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 MYH16Q9H6N6 1097 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
CCDC84-210ENST00000583842 NMRK2Q9NPI5 230 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 ABCC12Q96J65 1359 aa14.31□□□□□ -0.12
CCDC84-210ENST00000583842 SLX4Q8IY92 1834 aa14.3□□□□□ -0.12
CCDC84-210ENST00000583842 CCER2I3L3R5 266 aa14.3□□□□□ -0.12
CCDC84-210ENST00000583842 FZD9O00144 591 aa14.3□□□□□ -0.12
CCDC84-210ENST00000583842 PCCAP05165 728 aaPredicted RBP14.3□□□□□ -0.12
CCDC84-210ENST00000583842 HSPA6P17066 643 aa14.3□□□□□ -0.12
CCDC84-210ENST00000583842 DDX46Q7L014 1031 aaKnown RBP14.3□□□□□ -0.12
CCDC84-210ENST00000583842 C16orf71Q8IYS4 520 aaPredicted RBP14.3□□□□□ -0.12
CCDC84-210ENST00000583842 L3MBTL3Q96JM7 780 aaPredicted RBP14.3□□□□□ -0.12
CCDC84-210ENST00000583842 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
CCDC84-210ENST00000583842 IARSP41252 1262 aaKnown RBP14.29□□□□□ -0.12
CCDC84-210ENST00000583842 JDP2Q8WYK2 163 aa14.29□□□□□ -0.12
CCDC84-210ENST00000583842 FER1L6Q2WGJ9 1857 aa14.29□□□□□ -0.12
CCDC84-210ENST00000583842 IQCA1LA6NCM1 817 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 POTECB2RU33 542 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
CCDC84-210ENST00000583842 GRAPQ13588 217 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 GRAPLQ8TC17 118 aaPredicted RBP14.28□□□□□ -0.12
CCDC84-210ENST00000583842 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
CCDC84-210ENST00000583842 FAM89AQ96GI7 184 aa14.28□□□□□ -0.12
CCDC84-210ENST00000583842 ZNF219Q9P2Y4 722 aaPredicted RBP14.28□□□□□ -0.12
CCDC84-210ENST00000583842 ZNF521Q96K83 1311 aa14.27□□□□□ -0.12
CCDC84-210ENST00000583842 PI4KAP2A4QPH2 592 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 ATP5J2-PTCD1G3V325 749 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 IRS4O14654 1257 aaPredicted RBP14.27□□□□□ -0.13
CCDC84-210ENST00000583842 HCLS1P14317 486 aaPredicted RBP14.27□□□□□ -0.13
CCDC84-210ENST00000583842 APLP1P51693 650 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 NEXNQ0ZGT2 675 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 PI4KAP1Q8N8J0 262 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 SMC1BQ8NDV3 1235 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 ZNF428Q96B54 188 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 CWC25Q9NXE8 425 aaPredicted RBP14.27□□□□□ -0.13
CCDC84-210ENST00000583842 ARFGEF2Q9Y6D5 1785 aa14.27□□□□□ -0.13
CCDC84-210ENST00000583842 CDHR2Q9BYE9 1310 aa14.26□□□□□ -0.13
CCDC84-210ENST00000583842 FANCIQ9NVI1 1328 aa14.26□□□□□ -0.13
CCDC84-210ENST00000583842 SENP3-EIF4A1A0A087X0R7 540 aa14.26□□□□□ -0.13
CCDC84-210ENST00000583842 RPS8P62241 208 aaKnown RBP14.26□□□□□ -0.13
CCDC84-210ENST00000583842 GPC2Q8N158 579 aa14.26□□□□□ -0.13
CCDC84-210ENST00000583842 MAP3K2Q9Y2U5 619 aa14.26□□□□□ -0.13
CCDC84-210ENST00000583842 ABCC4O15439 1325 aa14.25□□□□□ -0.13
CCDC84-210ENST00000583842 H7C1W4 665 aa14.25□□□□□ -0.13
CCDC84-210ENST00000583842 PDE8AO60658 829 aa14.25□□□□□ -0.13
CCDC84-210ENST00000583842 MPNDQ8N594 471 aa14.25□□□□□ -0.13
CCDC84-210ENST00000583842 ZNF277Q9NRM2 450 aaPredicted RBP14.25□□□□□ -0.13
CCDC84-210ENST00000583842 COL11A2P13942 1736 aaPredicted RBP14.24□□□□□ -0.13
CCDC84-210ENST00000583842 DDNO94850 711 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms