RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 U2AF1Q01081 240 aaKnown RBP eCLIP10.82□□□□□ -0.68
MSI2-218ENST00000583821 PRR5LQ6MZQ0 368 aa10.82□□□□□ -0.68
MSI2-218ENST00000583821 TTLL6Q8N841 843 aa10.82□□□□□ -0.68
MSI2-218ENST00000583821 MS4A4AQ96JQ5 239 aa10.82□□□□□ -0.68
MSI2-218ENST00000583821 MFRPQ9BY79 579 aa10.82□□□□□ -0.68
MSI2-218ENST00000583821 KDM2BQ8NHM5 1336 aa10.82□□□□□ -0.68
MSI2-218ENST00000583821 H0YIN7 160 aa10.81□□□□□ -0.68
MSI2-218ENST00000583821 IL6STP40189 918 aaPredicted RBP10.81□□□□□ -0.68
MSI2-218ENST00000583821 C16orf71Q8IYS4 520 aaPredicted RBP10.81□□□□□ -0.68
MSI2-218ENST00000583821 RBM46Q8TBY0 533 aaKnown RBP10.81□□□□□ -0.68
MSI2-218ENST00000583821 LMNB1P20700 586 aa10.8□□□□□ -0.68
MSI2-218ENST00000583821 DZIP3Q86Y13 1208 aaKnown RBP10.8□□□□□ -0.68
MSI2-218ENST00000583821 DNAJC5GQ8N7S2 189 aa10.8□□□□□ -0.68
MSI2-218ENST00000583821 ZNF622Q969S3 477 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSI2-218ENST00000583821 TEX13AQ9BXU3 409 aaPredicted RBP10.8□□□□□ -0.68
MSI2-218ENST00000583821 USP16Q9Y5T5 823 aa10.8□□□□□ -0.68
MSI2-218ENST00000583821 C21orf2O43822 256 aa10.79□□□□□ -0.68
MSI2-218ENST00000583821 IFFO2Q5TF58 517 aa10.79□□□□□ -0.68
MSI2-218ENST00000583821 CNBD1Q8NA66 436 aa10.79□□□□□ -0.68
MSI2-218ENST00000583821 MIS18AQ9NYP9 233 aa10.79□□□□□ -0.68
MSI2-218ENST00000583821 NUDCQ9Y266 331 aa10.79□□□□□ -0.68
MSI2-218ENST00000583821 NBPF26B4DH59 902 aa10.78□□□□□ -0.68
MSI2-218ENST00000583821 NBPF10Q6P3W6 841 aaKnown RBP10.78□□□□□ -0.68
MSI2-218ENST00000583821 NBPF15Q8N660 670 aa10.78□□□□□ -0.68
MSI2-218ENST00000583821 FBXO22Q8NEZ5 403 aa10.78□□□□□ -0.68
MSI2-218ENST00000583821 RTF1Q92541 710 aaKnown RBP10.78□□□□□ -0.68
MSI2-218ENST00000583821 SETDB2Q96T68 719 aa10.78□□□□□ -0.68
MSI2-218ENST00000583821 BRIP1Q9BX63 1249 aa10.78□□□□□ -0.68
MSI2-218ENST00000583821 ZC3H4Q9UPT8 1303 aaKnown RBP10.78□□□□□ -0.68
MSI2-218ENST00000583821 NPHP1O15259 732 aa10.77□□□□□ -0.69
MSI2-218ENST00000583821 PDE6BP35913 854 aa10.77□□□□□ -0.69
MSI2-218ENST00000583821 FSTL1Q12841 308 aa10.77□□□□□ -0.69
MSI2-218ENST00000583821 PRPF40BQ6NWY9 871 aaKnown RBP10.77□□□□□ -0.69
MSI2-218ENST00000583821 LAMB2P55268 1798 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 ANKRD36CQ5JPF3 1778 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 GLTPD2A6NH11 291 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 SNRPA1P09661 255 aaKnown RBP10.76□□□□□ -0.69
MSI2-218ENST00000583821 ST5P78524 1137 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 NPM2Q86SE8 214 aaKnown RBP10.76□□□□□ -0.69
MSI2-218ENST00000583821 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
MSI2-218ENST00000583821 THUMPD2Q9BTF0 503 aaKnown RBP10.76□□□□□ -0.69
MSI2-218ENST00000583821 POTECB2RU33 542 aa10.75□□□□□ -0.69
MSI2-218ENST00000583821 SRGNP10124 158 aa10.75□□□□□ -0.69
MSI2-218ENST00000583821 OLFM4Q6UX06 510 aa10.75□□□□□ -0.69
MSI2-218ENST00000583821 NBPF5PQ86XG9 351 aaPredicted RBP10.75□□□□□ -0.69
MSI2-218ENST00000583821 SMC1BQ8NDV3 1235 aa10.75□□□□□ -0.69
MSI2-218ENST00000583821 ABCC12Q96J65 1359 aa10.75□□□□□ -0.69
MSI2-218ENST00000583821 SCN4AP35499 1836 aa10.74□□□□□ -0.69
MSI2-218ENST00000583821 PPP1R37O75864 691 aa10.74□□□□□ -0.69
MSI2-218ENST00000583821 HLFQ16534 295 aa10.74□□□□□ -0.69
MSI2-218ENST00000583821 STYK1Q6J9G0 422 aa10.74□□□□□ -0.69
MSI2-218ENST00000583821 KLRG1Q96E93 195 aa10.74□□□□□ -0.69
MSI2-218ENST00000583821 COL4A5P29400 1685 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 HTATSF1O43719 755 aaKnown RBP10.73□□□□□ -0.69
MSI2-218ENST00000583821 VEGFAP15692 232 aaPredicted RBP10.73□□□□□ -0.69
MSI2-218ENST00000583821 TAF7Q15545 349 aaPredicted RBP10.73□□□□□ -0.69
MSI2-218ENST00000583821 ERFEQ4G0M1 354 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 SLC51AQ86UW1 340 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 NGEFQ8N5V2 710 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 MASTLQ96GX5 879 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 PLEKHF1Q96S99 279 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 TAOK3Q9H2K8 898 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 NIP7Q9Y221 180 aaKnown RBP eCLIP10.73□□□□□ -0.69
MSI2-218ENST00000583821 ZNF652Q9Y2D9 606 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 LTBP3Q9NS15 1303 aa10.73□□□□□ -0.69
MSI2-218ENST00000583821 ADAMTSL1Q8N6G6 1762 aa10.72□□□□□ -0.69
MSI2-218ENST00000583821 TTLL7Q6ZT98 887 aa10.72□□□□□ -0.69
MSI2-218ENST00000583821 CNKSR1Q969H4 720 aa10.72□□□□□ -0.69
MSI2-218ENST00000583821 TAF1P21675 1872 aa10.72□□□□□ -0.69
MSI2-218ENST00000583821 DDNO94850 711 aaPredicted RBP10.71□□□□□ -0.69
MSI2-218ENST00000583821 NPR1P16066 1061 aa10.71□□□□□ -0.69
MSI2-218ENST00000583821 NFE2L2Q16236 605 aa10.71□□□□□ -0.69
MSI2-218ENST00000583821 CLEC4GQ6UXB4 293 aa10.71□□□□□ -0.69
MSI2-218ENST00000583821 C7orf43Q8WVR3 580 aa10.71□□□□□ -0.69
MSI2-218ENST00000583821 ZNF541Q9H0D2 1346 aa10.71□□□□□ -0.69
MSI2-218ENST00000583821 LTBP1Q14766 1721 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 SNED1Q8TER0 1413 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 UBN2Q6ZU65 1347 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 KLRG2A4D1S0 409 aaPredicted RBP10.7□□□□□ -0.7
MSI2-218ENST00000583821 MYL6BP14649 208 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 GPTP24298 496 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 EIF4A1P60842 406 aaKnown RBP10.7□□□□□ -0.7
MSI2-218ENST00000583821 CCDC93Q567U6 631 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 NUTM1Q86Y26 1132 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 JMYQ8N9B5 988 aa10.7□□□□□ -0.7
MSI2-218ENST00000583821 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
MSI2-218ENST00000583821 RRP7AQ9Y3A4 280 aaKnown RBP10.7□□□□□ -0.7
MSI2-218ENST00000583821 MAP3K15Q6ZN16 1313 aa10.69□□□□□ -0.7
MSI2-218ENST00000583821 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
MSI2-218ENST00000583821 TPTE2Q6XPS3 522 aa10.69□□□□□ -0.7
MSI2-218ENST00000583821 ZBTB3Q9H5J0 574 aa10.69□□□□□ -0.7
MSI2-218ENST00000583821 DDX60Q8IY21 1712 aaKnown RBP10.69□□□□□ -0.7
MSI2-218ENST00000583821 NEFMP07197 916 aa10.68□□□□□ -0.7
MSI2-218ENST00000583821 FKBP4Q02790 459 aaKnown RBP eCLIP10.68□□□□□ -0.7
MSI2-218ENST00000583821 SOGA3Q5TF21 947 aa10.68□□□□□ -0.7
MSI2-218ENST00000583821 ANXA1P04083 346 aa10.67□□□□□ -0.7
MSI2-218ENST00000583821 GTF2E1P29083 439 aaPredicted RBP10.67□□□□□ -0.7
MSI2-218ENST00000583821 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms