RNA–Protein interactions for RNA: ENST00000583777.5

TSPO-206, Transcript of translocator protein, humanhuman

TSL 1 (best) BASIC

Gene TSPO, Length 636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-206ENST00000583777 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
TSPO-206ENST00000583777 HOXA10P31260 410 aaPredicted RBP19.1■□□□□ 0.65
TSPO-206ENST00000583777 SOGA3Q5TF21 947 aa19.1■□□□□ 0.65
TSPO-206ENST00000583777 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
TSPO-206ENST00000583777 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
TSPO-206ENST00000583777 ZNF428Q96B54 188 aa19.1■□□□□ 0.65
TSPO-206ENST00000583777 COL4A5P29400 1685 aa19.1■□□□□ 0.65
TSPO-206ENST00000583777 HOXB7P09629 217 aa19.09■□□□□ 0.65
TSPO-206ENST00000583777 ALDH1B1P30837 517 aa19.09■□□□□ 0.65
TSPO-206ENST00000583777 FKBP4Q02790 459 aaKnown RBP eCLIP19.09■□□□□ 0.65
TSPO-206ENST00000583777 PARP10Q53GL7 1025 aa19.09■□□□□ 0.65
TSPO-206ENST00000583777 NLRP10Q86W26 655 aa19.09■□□□□ 0.65
TSPO-206ENST00000583777 ZNF277Q9NRM2 450 aaPredicted RBP19.09■□□□□ 0.65
TSPO-206ENST00000583777 IFT57Q9NWB7 429 aa19.09■□□□□ 0.65
TSPO-206ENST00000583777 ZNF316A6NFI3 1004 aaPredicted RBP19.08■□□□□ 0.64
TSPO-206ENST00000583777 PPP1R42Q7Z4L9 355 aa19.08■□□□□ 0.64
TSPO-206ENST00000583777 DDNO94850 711 aaPredicted RBP19.07■□□□□ 0.64
TSPO-206ENST00000583777 VEGFAP15692 232 aaPredicted RBP19.07■□□□□ 0.64
TSPO-206ENST00000583777 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
TSPO-206ENST00000583777 SLC10A5Q5PT55 438 aa19.07■□□□□ 0.64
TSPO-206ENST00000583777 C16orf71Q8IYS4 520 aaPredicted RBP19.07■□□□□ 0.64
TSPO-206ENST00000583777 UTP14AQ9BVJ6 771 aaKnown RBP19.07■□□□□ 0.64
TSPO-206ENST00000583777 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
TSPO-206ENST00000583777 ELL2O00472 640 aaPredicted RBP19.06■□□□□ 0.64
TSPO-206ENST00000583777 HTRA3P83110 453 aa19.06■□□□□ 0.64
TSPO-206ENST00000583777 C8orf58Q8NAV2 365 aa19.06■□□□□ 0.64
TSPO-206ENST00000583777 RPGRQ92834 1020 aaKnown RBP19.06■□□□□ 0.64
TSPO-206ENST00000583777 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
TSPO-206ENST00000583777 ZNF541Q9H0D2 1346 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 COL4A1P02462 1669 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 GNAI1P63096 354 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 FSTL1Q12841 308 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 DPY19L2Q6NUT2 758 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 RTKN2Q8IZC4 609 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 PLBD2Q8NHP8 589 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 CRAMP1Q96RY5 1269 aa19.05■□□□□ 0.64
TSPO-206ENST00000583777 HCLS1P14317 486 aaPredicted RBP19.04■□□□□ 0.64
TSPO-206ENST00000583777 TAF1P21675 1872 aa19.04■□□□□ 0.64
TSPO-206ENST00000583777 APLP1P51693 650 aa19.04■□□□□ 0.64
TSPO-206ENST00000583777 HSP90AB3PQ58FF7 597 aa19.04■□□□□ 0.64
TSPO-206ENST00000583777 ANKRD13DQ6ZTN6 518 aa19.04■□□□□ 0.64
TSPO-206ENST00000583777 DNAJC5GQ8N7S2 189 aa19.04■□□□□ 0.64
TSPO-206ENST00000583777 PHAXQ9H814 394 aaKnown RBP19.04■□□□□ 0.64
TSPO-206ENST00000583777 TCERG1O14776 1098 aaKnown RBP19.03■□□□□ 0.64
TSPO-206ENST00000583777 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
TSPO-206ENST00000583777 RBM17Q96I25 401 aaKnown RBP19.03■□□□□ 0.64
TSPO-206ENST00000583777 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
TSPO-206ENST00000583777 ISCA1Q9BUE6 129 aa19.03■□□□□ 0.64
TSPO-206ENST00000583777 ABCC4O15439 1325 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 ATP5J2-PTCD1G3V325 749 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 PPEF1O14829 653 aaPredicted RBP19.02■□□□□ 0.64
TSPO-206ENST00000583777 POTEIP0CG38 1075 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 POTEJP0CG39 1038 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 IARSP41252 1262 aaKnown RBP19.02■□□□□ 0.64
TSPO-206ENST00000583777 SMC1BQ8NDV3 1235 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 TSR2Q969E8 191 aaKnown RBP19.02■□□□□ 0.64
TSPO-206ENST00000583777 PSMD1Q99460 953 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 HYPKQ9NX55 129 aa19.02■□□□□ 0.64
TSPO-206ENST00000583777 TRMT112Q9UI30 125 aaKnown RBP19.02■□□□□ 0.64
TSPO-206ENST00000583777 CALD1Q05682 793 aaKnown RBP19.01■□□□□ 0.63
TSPO-206ENST00000583777 MRS2Q9HD23 443 aa19.01■□□□□ 0.63
TSPO-206ENST00000583777 SH3TC1Q8TE82 1336 aa19■□□□□ 0.63
TSPO-206ENST00000583777 FZD9O00144 591 aa19■□□□□ 0.63
TSPO-206ENST00000583777 WWC1Q8IX03 1113 aa19■□□□□ 0.63
TSPO-206ENST00000583777 CCDC27Q2M243 656 aa18.99■□□□□ 0.63
TSPO-206ENST00000583777 CC2D2BQ6DHV5 1058 aa18.99■□□□□ 0.63
TSPO-206ENST00000583777 FAM89AQ96GI7 184 aa18.99■□□□□ 0.63
TSPO-206ENST00000583777 L3MBTL3Q96JM7 780 aaPredicted RBP18.99■□□□□ 0.63
TSPO-206ENST00000583777 SCN4AP35499 1836 aa18.99■□□□□ 0.63
TSPO-206ENST00000583777 LRRC37AA6NMS7 1700 aa18.98■□□□□ 0.63
TSPO-206ENST00000583777 LTBP1Q14766 1721 aa18.98■□□□□ 0.63
TSPO-206ENST00000583777 ATP6V0A2Q9Y487 856 aa18.98■□□□□ 0.63
TSPO-206ENST00000583777 ADAMTSL1Q8N6G6 1762 aa18.98■□□□□ 0.63
TSPO-206ENST00000583777 DUOX1Q9NRD9 1551 aa18.98■□□□□ 0.63
TSPO-206ENST00000583777 ANP32CO43423 234 aa18.97■□□□□ 0.63
TSPO-206ENST00000583777 TRIM28Q13263 835 aaKnown RBP18.96■□□□□ 0.63
TSPO-206ENST00000583777 RTL5Q5HYW3 569 aaPredicted RBP18.96■□□□□ 0.63
TSPO-206ENST00000583777 TAF1DQ9H5J8 278 aaPredicted RBP18.95■□□□□ 0.62
TSPO-206ENST00000583777 GRAPQ13588 217 aa18.94■□□□□ 0.62
TSPO-206ENST00000583777 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
TSPO-206ENST00000583777 GRAPLQ8TC17 118 aaPredicted RBP18.94■□□□□ 0.62
TSPO-206ENST00000583777 GOLGA2Q08379 1002 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 SF3B3Q15393 1217 aaKnown RBP18.93■□□□□ 0.62
TSPO-206ENST00000583777 AOC3Q16853 763 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 GRIPAP1Q4V328 841 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 SP8Q8IXZ3 490 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 JDP2Q8WYK2 163 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
TSPO-206ENST00000583777 MYD88Q99836 296 aa18.93■□□□□ 0.62
TSPO-206ENST00000583777 RTFDC1Q9BY42 306 aaPredicted RBP18.93■□□□□ 0.62
TSPO-206ENST00000583777 BBOX1O75936 387 aa18.92■□□□□ 0.62
TSPO-206ENST00000583777 CCDC30Q5VVM6 783 aa18.92■□□□□ 0.62
TSPO-206ENST00000583777 CHADLQ6NUI6 762 aa18.92■□□□□ 0.62
TSPO-206ENST00000583777 DDX46Q7L014 1031 aaKnown RBP18.92■□□□□ 0.62
TSPO-206ENST00000583777 GPC2Q8N158 579 aa18.92■□□□□ 0.62
TSPO-206ENST00000583777 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
TSPO-206ENST00000583777 JARID2Q92833 1246 aaPredicted RBP18.92■□□□□ 0.62
TSPO-206ENST00000583777 SALL2Q9Y467 1007 aaPredicted RBP18.92■□□□□ 0.62
TSPO-206ENST00000583777 IQCA1LA6NCM1 817 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms