RNA–Protein interactions for RNA: ENST00000583463.5

SPECC1-220, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-220ENST00000583463 FMNL2Q96PY5 1086 aa20.06■□□□□ 0.8
SPECC1-220ENST00000583463 PRDM10Q9NQV6 1147 aa20.06■□□□□ 0.8
SPECC1-220ENST00000583463 COL4A5P29400 1685 aa20.06■□□□□ 0.8
SPECC1-220ENST00000583463 EIF4A1P60842 406 aaKnown RBP20.05■□□□□ 0.8
SPECC1-220ENST00000583463 MAP1SQ66K74 1059 aaPredicted RBP20.05■□□□□ 0.8
SPECC1-220ENST00000583463 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
SPECC1-220ENST00000583463 CNKSR1Q969H4 720 aa20.05■□□□□ 0.8
SPECC1-220ENST00000583463 SETDB2Q96T68 719 aa20.05■□□□□ 0.8
SPECC1-220ENST00000583463 WBP1LQ9NX94 342 aa20.05■□□□□ 0.8
SPECC1-220ENST00000583463 LAMB4A4D0S4 1761 aa20.05■□□□□ 0.8
SPECC1-220ENST00000583463 TMEM88BA6NKF7 163 aa20.04■□□□□ 0.8
SPECC1-220ENST00000583463 IL6STP40189 918 aaPredicted RBP20.04■□□□□ 0.8
SPECC1-220ENST00000583463 CTCFP49711 727 aaPredicted RBP20.04■□□□□ 0.8
SPECC1-220ENST00000583463 MASTLQ96GX5 879 aa20.04■□□□□ 0.8
SPECC1-220ENST00000583463 L3MBTL3Q96JM7 780 aaPredicted RBP20.04■□□□□ 0.8
SPECC1-220ENST00000583463 USP16Q9Y5T5 823 aa20.04■□□□□ 0.8
SPECC1-220ENST00000583463 RNF123Q5XPI4 1314 aa20.03■□□□□ 0.8
SPECC1-220ENST00000583463 NPHP1O15259 732 aa20.03■□□□□ 0.8
SPECC1-220ENST00000583463 HSPA8P11142 646 aaKnown RBP20.03■□□□□ 0.8
SPECC1-220ENST00000583463 FAM161AQ3B820 660 aa20.03■□□□□ 0.8
SPECC1-220ENST00000583463 DUSP27Q5VZP5 1158 aa20.03■□□□□ 0.8
SPECC1-220ENST00000583463 CLEC11AQ9Y240 323 aa20.03■□□□□ 0.8
SPECC1-220ENST00000583463 FAM177BA6PVY3 158 aa20.02■□□□□ 0.8
SPECC1-220ENST00000583463 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
SPECC1-220ENST00000583463 ST5P78524 1137 aa20.01■□□□□ 0.79
SPECC1-220ENST00000583463 AIDAQ96BJ3 306 aa20.01■□□□□ 0.79
SPECC1-220ENST00000583463 ABHD8Q96I13 439 aa20.01■□□□□ 0.79
SPECC1-220ENST00000583463 HOXB7P09629 217 aa20■□□□□ 0.79
SPECC1-220ENST00000583463 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
SPECC1-220ENST00000583463 EPHX2P34913 555 aa20■□□□□ 0.79
SPECC1-220ENST00000583463 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
SPECC1-220ENST00000583463 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 SLC34A2O95436 690 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 EXOSC9Q06265 439 aaKnown RBP19.99■□□□□ 0.79
SPECC1-220ENST00000583463 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 CNTROBQ8N137 903 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 HACL1Q9UJ83 578 aa19.99■□□□□ 0.79
SPECC1-220ENST00000583463 FKBP4Q02790 459 aaKnown RBP eCLIP19.98■□□□□ 0.79
SPECC1-220ENST00000583463 NBPF5PQ86XG9 351 aaPredicted RBP19.98■□□□□ 0.79
SPECC1-220ENST00000583463 C8orf58Q8NAV2 365 aa19.98■□□□□ 0.79
SPECC1-220ENST00000583463 TRPM7Q96QT4 1865 aa19.98■□□□□ 0.79
SPECC1-220ENST00000583463 SNED1Q8TER0 1413 aa19.97■□□□□ 0.79
SPECC1-220ENST00000583463 RASSF10A6NK89 507 aa19.97■□□□□ 0.79
SPECC1-220ENST00000583463 DEFB115Q30KQ5 88 aa19.97■□□□□ 0.79
SPECC1-220ENST00000583463 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
SPECC1-220ENST00000583463 TSKSQ9UJT2 592 aa19.97■□□□□ 0.79
SPECC1-220ENST00000583463 WDR33Q9C0J8 1336 aaKnown RBP19.97■□□□□ 0.79
SPECC1-220ENST00000583463 THSD7BQ9C0I4 1608 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 HLFQ16534 295 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
SPECC1-220ENST00000583463 SYNE4Q8N205 404 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 TSPYL6Q8N831 410 aa19.96■□□□□ 0.79
SPECC1-220ENST00000583463 TEX13AQ9BXU3 409 aaPredicted RBP19.96■□□□□ 0.79
SPECC1-220ENST00000583463 NUP98P52948 1817 aa19.95■□□□□ 0.78
SPECC1-220ENST00000583463 FZD9O00144 591 aa19.95■□□□□ 0.78
SPECC1-220ENST00000583463 NPR1P16066 1061 aa19.95■□□□□ 0.78
SPECC1-220ENST00000583463 CASP8AP2Q9UKL3 1982 aa19.95■□□□□ 0.78
SPECC1-220ENST00000583463 KLRG2A4D1S0 409 aaPredicted RBP19.94■□□□□ 0.78
SPECC1-220ENST00000583463 ELL2O00472 640 aaPredicted RBP19.94■□□□□ 0.78
SPECC1-220ENST00000583463 CT47B1P0C2W7 299 aaPredicted RBP19.94■□□□□ 0.78
SPECC1-220ENST00000583463 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
SPECC1-220ENST00000583463 GRM1Q13255 1194 aa19.94■□□□□ 0.78
SPECC1-220ENST00000583463 SOGA3Q5TF21 947 aa19.94■□□□□ 0.78
SPECC1-220ENST00000583463 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
SPECC1-220ENST00000583463 ABCC12Q96J65 1359 aa19.94■□□□□ 0.78
SPECC1-220ENST00000583463 TRAF5O00463 557 aa19.93■□□□□ 0.78
SPECC1-220ENST00000583463 CHMP4AQ9BY43 222 aa19.93■□□□□ 0.78
SPECC1-220ENST00000583463 NIP7Q9Y221 180 aaKnown RBP eCLIP19.93■□□□□ 0.78
SPECC1-220ENST00000583463 HDGFL1Q5TGJ6 251 aa19.92■□□□□ 0.78
SPECC1-220ENST00000583463 CYP4F22Q6NT55 531 aa19.92■□□□□ 0.78
SPECC1-220ENST00000583463 GJA3Q9Y6H8 435 aa19.92■□□□□ 0.78
SPECC1-220ENST00000583463 VAMP4O75379 141 aa19.91■□□□□ 0.78
SPECC1-220ENST00000583463 EPS15P42566 896 aa19.91■□□□□ 0.78
SPECC1-220ENST00000583463 NUTM1Q86Y26 1132 aa19.91■□□□□ 0.78
SPECC1-220ENST00000583463 DDX21Q9NR30 783 aaKnown RBP eCLIP19.91■□□□□ 0.78
SPECC1-220ENST00000583463 ERBB4Q15303 1308 aa19.91■□□□□ 0.78
SPECC1-220ENST00000583463 CCDC85CA6NKD9 419 aa19.9■□□□□ 0.78
SPECC1-220ENST00000583463 AOC2O75106 756 aa19.9■□□□□ 0.78
SPECC1-220ENST00000583463 CST9Q5W186 159 aa19.9■□□□□ 0.78
SPECC1-220ENST00000583463 ZNF428Q96B54 188 aa19.9■□□□□ 0.78
SPECC1-220ENST00000583463 EIF2S2P20042 333 aaKnown RBP19.89■□□□□ 0.77
SPECC1-220ENST00000583463 CCDC30Q5VVM6 783 aa19.89■□□□□ 0.77
SPECC1-220ENST00000583463 PAXIP1Q6ZW49 1069 aaPredicted RBP19.89■□□□□ 0.77
SPECC1-220ENST00000583463 NPM2Q86SE8 214 aaKnown RBP19.89■□□□□ 0.77
SPECC1-220ENST00000583463 CAPNS2Q96L46 248 aa19.89■□□□□ 0.77
SPECC1-220ENST00000583463 TCERG1O14776 1098 aaKnown RBP19.88■□□□□ 0.77
SPECC1-220ENST00000583463 SCNN1DP51172 638 aa19.88■□□□□ 0.77
SPECC1-220ENST00000583463 GPC2Q8N158 579 aa19.88■□□□□ 0.77
SPECC1-220ENST00000583463 CLEC4GQ6UXB4 293 aa19.87■□□□□ 0.77
SPECC1-220ENST00000583463 PNMA8AQ86V59 439 aaPredicted RBP19.87■□□□□ 0.77
SPECC1-220ENST00000583463 RTKN2Q8IZC4 609 aa19.87■□□□□ 0.77
SPECC1-220ENST00000583463 NECTIN2Q92692 538 aa19.87■□□□□ 0.77
SPECC1-220ENST00000583463 TPTE2Q6XPS3 522 aa19.86■□□□□ 0.77
SPECC1-220ENST00000583463 C3orf67Q6ZVT6 689 aa19.86■□□□□ 0.77
SPECC1-220ENST00000583463 STK31Q9BXU1 1019 aa19.86■□□□□ 0.77
SPECC1-220ENST00000583463 CHPF2Q9P2E5 772 aa19.86■□□□□ 0.77
SPECC1-220ENST00000583463 DBF4Q9UBU7 674 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms