RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ZNF790Q6PG37 636 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 PAXIP1Q6ZW49 1069 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-205ENST00000582331 NBPF5PQ86XG9 351 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-205ENST00000582331 DZIP3Q86Y13 1208 aaKnown RBP10.32□□□□□ -0.76
CCDC47-205ENST00000582331 CAPNS2Q96L46 248 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 DDX21Q9NR30 783 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCDC47-205ENST00000582331 RNF123Q5XPI4 1314 aa10.32□□□□□ -0.76
CCDC47-205ENST00000582331 UBR2Q8IWV8 1755 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 SCN7AQ01118 1682 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 FZD9O00144 591 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 IARSP41252 1262 aaKnown RBP10.31□□□□□ -0.76
CCDC47-205ENST00000582331 DCAF8Q5TAQ9 597 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 GPC2Q8N158 579 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 SYNE4Q8N205 404 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 GPR101Q96P66 508 aaPredicted RBP10.31□□□□□ -0.76
CCDC47-205ENST00000582331 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 KNSTRNQ9Y448 316 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 ADAMTSL1Q8N6G6 1762 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
CCDC47-205ENST00000582331 KLRG2A4D1S0 409 aaPredicted RBP10.3□□□□□ -0.76
CCDC47-205ENST00000582331 ALDH1B1P30837 517 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 GRM1Q13255 1194 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 CYP4F22Q6NT55 531 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 CLEC4GQ6UXB4 293 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 TPTE2Q6XPS3 522 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 JDP2Q8WYK2 163 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 CFAP44Q96MT7 982 aa10.3□□□□□ -0.76
CCDC47-205ENST00000582331 DIAPH1O60610 1272 aaKnown RBP10.29□□□□□ -0.76
CCDC47-205ENST00000582331 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
CCDC47-205ENST00000582331 TIE1P35590 1138 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
CCDC47-205ENST00000582331 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 TIMELESSQ9UNS1 1208 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 ZNF652Q9Y2D9 606 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 PCDHB13Q9Y5F0 798 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 GJA3Q9Y6H8 435 aa10.29□□□□□ -0.76
CCDC47-205ENST00000582331 GNAT3A8MTJ3 354 aa10.28□□□□□ -0.76
CCDC47-205ENST00000582331 C7P10643 843 aa10.28□□□□□ -0.76
CCDC47-205ENST00000582331 MAP2K2P36507 400 aa10.28□□□□□ -0.76
CCDC47-205ENST00000582331 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
CCDC47-205ENST00000582331 SLC39A7Q92504 469 aa10.28□□□□□ -0.76
CCDC47-205ENST00000582331 TSKSQ9UJT2 592 aa10.28□□□□□ -0.76
CCDC47-205ENST00000582331 CA12O43570 354 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 AOC2O75106 756 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 EIF4G2P78344 907 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC47-205ENST00000582331 GSE1Q14687 1217 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 CST9Q5W186 159 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 USP50Q70EL3 339 aaPredicted RBP10.27□□□□□ -0.77
CCDC47-205ENST00000582331 GAS2L2Q8NHY3 880 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 PSMD1Q99460 953 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 MCOLN1Q9GZU1 580 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 NIP7Q9Y221 180 aaKnown RBP eCLIP10.27□□□□□ -0.77
CCDC47-205ENST00000582331 TLL2Q9Y6L7 1015 aa10.27□□□□□ -0.77
CCDC47-205ENST00000582331 THSD7BQ9C0I4 1608 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 FAM177BA6PVY3 158 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 BTBD11A6QL63 1104 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 TRAF5O00463 557 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 KCNQ3O43525 872 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 HSPA5P11021 654 aaKnown RBP10.26□□□□□ -0.77
CCDC47-205ENST00000582331 GTF2E1P29083 439 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-205ENST00000582331 EPS15P42566 896 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 PIP4K2AP48426 406 aaPredicted RBP10.26□□□□□ -0.77
CCDC47-205ENST00000582331 CC2D2BQ6DHV5 1058 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 USP16Q9Y5T5 823 aa10.26□□□□□ -0.77
CCDC47-205ENST00000582331 BCORQ6W2J9 1755 aa10.25□□□□□ -0.77
CCDC47-205ENST00000582331 RGL2O15211 777 aa10.25□□□□□ -0.77
CCDC47-205ENST00000582331 SCNN1DP51172 638 aa10.25□□□□□ -0.77
CCDC47-205ENST00000582331 AMER1Q5JTC6 1135 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-205ENST00000582331 BMP2KQ9NSY1 1161 aaPredicted RBP10.25□□□□□ -0.77
CCDC47-205ENST00000582331 TNRC18O15417 2968 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-205ENST00000582331 ATN1P54259 1190 aaPredicted RBP10.24□□□□□ -0.77
CCDC47-205ENST00000582331 DGKZQ13574 1117 aa10.24□□□□□ -0.77
CCDC47-205ENST00000582331 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
CCDC47-205ENST00000582331 LARGE2Q8N3Y3 721 aa10.24□□□□□ -0.77
CCDC47-205ENST00000582331 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 U2SURPO15042 1029 aaKnown RBP10.23□□□□□ -0.77
CCDC47-205ENST00000582331 SNRPA1P09661 255 aaKnown RBP10.23□□□□□ -0.77
CCDC47-205ENST00000582331 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-205ENST00000582331 SAPCD2Q86UD0 394 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 ADARB2Q9NS39 739 aaKnown RBP10.23□□□□□ -0.77
CCDC47-205ENST00000582331 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 TRPC6Q9Y210 931 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 LTBP1Q14766 1721 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 SIPA1L3O60292 1781 aaPredicted RBP10.23□□□□□ -0.77
CCDC47-205ENST00000582331 TRPM7Q96QT4 1865 aa10.23□□□□□ -0.77
CCDC47-205ENST00000582331 CELF2O95319 508 aaKnown RBP10.22□□□□□ -0.77
CCDC47-205ENST00000582331 CRY2Q49AN0 593 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 IFNL1Q8IU54 200 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 IFNLR1Q8IU57 520 aaPredicted RBP10.22□□□□□ -0.77
CCDC47-205ENST00000582331 NIM1KQ8IY84 436 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 RPGRQ92834 1020 aaKnown RBP10.22□□□□□ -0.77
CCDC47-205ENST00000582331 HHIPL1Q96JK4 782 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 NYXQ9GZU5 481 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 CEMIPQ8WUJ3 1361 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 SNED1Q8TER0 1413 aa10.22□□□□□ -0.77
CCDC47-205ENST00000582331 NBPF26B4DH59 902 aa10.21□□□□□ -0.77
CCDC47-205ENST00000582331 HOXA10P31260 410 aaPredicted RBP10.21□□□□□ -0.77
CCDC47-205ENST00000582331 HLFQ16534 295 aa10.21□□□□□ -0.77
CCDC47-205ENST00000582331 CIAPIN1Q6FI81 312 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms