RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
CCDC57-213ENST00000581625 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
CCDC57-213ENST00000581625 GTF2E1P29083 439 aaPredicted RBP20.25■□□□□ 0.83
CCDC57-213ENST00000581625 SRCAPQ6ZRS2 3230 aa20.25■□□□□ 0.83
CCDC57-213ENST00000581625 NEURL1BA8MQ27 555 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 BEND3Q5T5X7 828 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 SLC4A10Q6U841 1118 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 ATF7IPQ6VMQ6 1270 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 FRAT1Q92837 279 aaPredicted RBP20.24■□□□□ 0.83
CCDC57-213ENST00000581625 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
CCDC57-213ENST00000581625 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
CCDC57-213ENST00000581625 FAM177BA6PVY3 158 aa20.23■□□□□ 0.83
CCDC57-213ENST00000581625 ALDH1L1O75891 902 aa20.23■□□□□ 0.83
CCDC57-213ENST00000581625 SRCIN1Q9C0H9 1055 aa20.23■□□□□ 0.83
CCDC57-213ENST00000581625 ABCC4O15439 1325 aa20.23■□□□□ 0.83
CCDC57-213ENST00000581625 ABCC12Q96J65 1359 aa20.22■□□□□ 0.83
CCDC57-213ENST00000581625 TRIM27P14373 513 aa20.22■□□□□ 0.83
CCDC57-213ENST00000581625 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
CCDC57-213ENST00000581625 ZBTB38Q8NAP3 1195 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-213ENST00000581625 BRIP1Q9BX63 1249 aa20.22■□□□□ 0.83
CCDC57-213ENST00000581625 FHDC1Q9C0D6 1143 aaPredicted RBP20.22■□□□□ 0.83
CCDC57-213ENST00000581625 PDZRN3Q9UPQ7 1066 aa20.22■□□□□ 0.83
CCDC57-213ENST00000581625 LAMB2P55268 1798 aa20.21■□□□□ 0.83
CCDC57-213ENST00000581625 PCCAP05165 728 aaPredicted RBP20.21■□□□□ 0.83
CCDC57-213ENST00000581625 HSP90B1P14625 803 aaKnown RBP20.21■□□□□ 0.83
CCDC57-213ENST00000581625 CCT4P50991 539 aaKnown RBP20.21■□□□□ 0.83
CCDC57-213ENST00000581625 GCKRQ14397 625 aa20.21■□□□□ 0.83
CCDC57-213ENST00000581625 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
CCDC57-213ENST00000581625 ANKRD31Q8N7Z5 1873 aa20.2■□□□□ 0.82
CCDC57-213ENST00000581625 PDE6BP35913 854 aa20.2■□□□□ 0.82
CCDC57-213ENST00000581625 TGFB2P61812 414 aa20.2■□□□□ 0.82
CCDC57-213ENST00000581625 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
CCDC57-213ENST00000581625 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
CCDC57-213ENST00000581625 KIAA1551Q9HCM1 1747 aa20.19■□□□□ 0.82
CCDC57-213ENST00000581625 ERFEQ4G0M1 354 aa20.19■□□□□ 0.82
CCDC57-213ENST00000581625 CDHR2Q9BYE9 1310 aa20.19■□□□□ 0.82
CCDC57-213ENST00000581625 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
CCDC57-213ENST00000581625 MS4A1P11836 297 aa20.18■□□□□ 0.82
CCDC57-213ENST00000581625 SLC10A5Q5PT55 438 aa20.18■□□□□ 0.82
CCDC57-213ENST00000581625 FTSJ3Q8IY81 847 aaKnown RBP20.18■□□□□ 0.82
CCDC57-213ENST00000581625 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
CCDC57-213ENST00000581625 DLEC1Q9Y238 1755 aa20.17■□□□□ 0.82
CCDC57-213ENST00000581625 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
CCDC57-213ENST00000581625 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
CCDC57-213ENST00000581625 DDX60Q8IY21 1712 aaKnown RBP20.16■□□□□ 0.82
CCDC57-213ENST00000581625 GRM8O00222 908 aa20.16■□□□□ 0.82
CCDC57-213ENST00000581625 INTS3Q68E01 1043 aaKnown RBP20.16■□□□□ 0.82
CCDC57-213ENST00000581625 CCDC24Q8N4L8 307 aa20.16■□□□□ 0.82
CCDC57-213ENST00000581625 KLRG2A4D1S0 409 aaPredicted RBP20.15■□□□□ 0.82
CCDC57-213ENST00000581625 H7C1W4 665 aa20.15■□□□□ 0.82
CCDC57-213ENST00000581625 IRS4O14654 1257 aaPredicted RBP20.15■□□□□ 0.82
CCDC57-213ENST00000581625 CRY2Q49AN0 593 aa20.15■□□□□ 0.82
CCDC57-213ENST00000581625 DZIP1LQ8IYY4 767 aaKnown RBP20.15■□□□□ 0.82
CCDC57-213ENST00000581625 NLRP3Q96P20 1036 aa20.15■□□□□ 0.82
CCDC57-213ENST00000581625 UTYO14607 1347 aa20.14■□□□□ 0.81
CCDC57-213ENST00000581625 H0YIN7 160 aa20.14■□□□□ 0.81
CCDC57-213ENST00000581625 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
CCDC57-213ENST00000581625 NLGN2Q8NFZ4 835 aa20.14■□□□□ 0.81
CCDC57-213ENST00000581625 CLUAP1Q96AJ1 413 aa20.14■□□□□ 0.81
CCDC57-213ENST00000581625 C9orf78Q9NZ63 289 aaPredicted RBP20.14■□□□□ 0.81
CCDC57-213ENST00000581625 PDE8AO60658 829 aa20.13■□□□□ 0.81
CCDC57-213ENST00000581625 RTL5Q5HYW3 569 aaPredicted RBP20.13■□□□□ 0.81
CCDC57-213ENST00000581625 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
CCDC57-213ENST00000581625 SRGNP10124 158 aa20.12■□□□□ 0.81
CCDC57-213ENST00000581625 HCLS1P14317 486 aaPredicted RBP20.12■□□□□ 0.81
CCDC57-213ENST00000581625 CASP7P55210 303 aa20.12■□□□□ 0.81
CCDC57-213ENST00000581625 SYNE4Q8N205 404 aa20.12■□□□□ 0.81
CCDC57-213ENST00000581625 NPR1P16066 1061 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 DPEP1P16444 411 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 PLA2G12BQ9BX93 195 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 TNNQ9UQP3 1299 aa20.11■□□□□ 0.81
CCDC57-213ENST00000581625 BRCA1P38398 1863 aaKnown RBP20.11■□□□□ 0.81
CCDC57-213ENST00000581625 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 CHRNA5P30532 468 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 RRP1P56182 461 aaKnown RBP20.1■□□□□ 0.81
CCDC57-213ENST00000581625 CTSWP56202 376 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 SF3B3Q15393 1217 aaKnown RBP20.1■□□□□ 0.81
CCDC57-213ENST00000581625 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 RPGRQ92834 1020 aaKnown RBP20.1■□□□□ 0.81
CCDC57-213ENST00000581625 HDAC5Q9UQL6 1122 aa20.1■□□□□ 0.81
CCDC57-213ENST00000581625 USP44Q9H0E7 712 aa20.09■□□□□ 0.81
CCDC57-213ENST00000581625 PIM2Q9P1W9 311 aa20.09■□□□□ 0.81
CCDC57-213ENST00000581625 MYH3P11055 1940 aa20.09■□□□□ 0.81
CCDC57-213ENST00000581625 PLIN1O60240 522 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 GNAI3P08754 354 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 NBPF7P0C2Y1 421 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-213ENST00000581625 UBTFL1P0CB47 393 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-213ENST00000581625 RLBP1P12271 317 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 KCNA3P22001 575 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 HOXA10P31260 410 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-213ENST00000581625 CCDC152Q4G0S7 254 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 C3orf67Q6ZVT6 689 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 ITPRIPQ8IWB1 547 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 JARID2Q92833 1246 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-213ENST00000581625 CNKSR1Q969H4 720 aa20.08■□□□□ 0.81
CCDC57-213ENST00000581625 RBM17Q96I25 401 aaKnown RBP20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 211.3 ms