RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 NFKBIEO00221 500 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
GGA3-209ENST00000580646 KIF3CO14782 793 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 NPR1P16066 1061 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 PRELPP51888 382 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 PRPF40BQ6NWY9 871 aaKnown RBP12.69□□□□□ -0.38
GGA3-209ENST00000580646 COPS6Q7L5N1 327 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 CHPF2Q9P2E5 772 aa12.69□□□□□ -0.38
GGA3-209ENST00000580646 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 ANKRD31Q8N7Z5 1873 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 AIMP1Q12904 312 aaKnown RBP12.68□□□□□ -0.38
GGA3-209ENST00000580646 SUSD4Q5VX71 490 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 XAGE3Q8WTP9 111 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 STK31Q9BXU1 1019 aa12.68□□□□□ -0.38
GGA3-209ENST00000580646 ERFEQ4G0M1 354 aa12.67□□□□□ -0.38
GGA3-209ENST00000580646 PARP10Q53GL7 1025 aa12.67□□□□□ -0.38
GGA3-209ENST00000580646 SOGA3Q5TF21 947 aa12.67□□□□□ -0.38
GGA3-209ENST00000580646 NMRK2Q9NPI5 230 aa12.67□□□□□ -0.38
GGA3-209ENST00000580646 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 KDM2BQ8NHM5 1336 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 NTSR2O95665 410 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 ALDH1B1P30837 517 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 ALDH1L2Q3SY69 923 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 PPP1R42Q7Z4L9 355 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 C7orf43Q8WVR3 580 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 ABCC12Q96J65 1359 aa12.66□□□□□ -0.38
GGA3-209ENST00000580646 IBTKQ9P2D0 1353 aaPredicted RBP12.66□□□□□ -0.38
GGA3-209ENST00000580646 ZC3H4Q9UPT8 1303 aaKnown RBP12.65□□□□□ -0.38
GGA3-209ENST00000580646 CRY2Q49AN0 593 aa12.65□□□□□ -0.38
GGA3-209ENST00000580646 UTP14AQ9BVJ6 771 aaKnown RBP12.65□□□□□ -0.38
GGA3-209ENST00000580646 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
GGA3-209ENST00000580646 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
GGA3-209ENST00000580646 LTBP3Q9NS15 1303 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 TOMM70O94826 608 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 BRPF1P55201 1214 aaPredicted RBP12.64□□□□□ -0.39
GGA3-209ENST00000580646 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 RRAGCQ9HB90 399 aa12.64□□□□□ -0.39
GGA3-209ENST00000580646 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
GGA3-209ENST00000580646 DDX58O95786 925 aaKnown RBP12.63□□□□□ -0.39
GGA3-209ENST00000580646 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
GGA3-209ENST00000580646 HOXA10P31260 410 aaPredicted RBP12.63□□□□□ -0.39
GGA3-209ENST00000580646 SLC10A5Q5PT55 438 aa12.63□□□□□ -0.39
GGA3-209ENST00000580646 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
GGA3-209ENST00000580646 NLRP10Q86W26 655 aa12.63□□□□□ -0.39
GGA3-209ENST00000580646 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
GGA3-209ENST00000580646 SLX4Q8IY92 1834 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 HTRA3P83110 453 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 FLIIQ13045 1269 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 C16orf71Q8IYS4 520 aaPredicted RBP12.62□□□□□ -0.39
GGA3-209ENST00000580646 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
GGA3-209ENST00000580646 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
GGA3-209ENST00000580646 SBF1O95248 1867 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 LAMB2P55268 1798 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
GGA3-209ENST00000580646 DPY19L2Q6NUT2 758 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 C3orf67Q6ZVT6 689 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 RBM17Q96I25 401 aaKnown RBP12.61□□□□□ -0.39
GGA3-209ENST00000580646 CRAMP1Q96RY5 1269 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 TRMT112Q9UI30 125 aaKnown RBP12.61□□□□□ -0.39
GGA3-209ENST00000580646 PTPRCP08575 1304 aa12.61□□□□□ -0.39
GGA3-209ENST00000580646 RARSP54136 660 aaKnown RBP12.6□□□□□ -0.39
GGA3-209ENST00000580646 CC2D2BQ6DHV5 1058 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
GGA3-209ENST00000580646 RBM46Q8TBY0 533 aaKnown RBP12.6□□□□□ -0.39
GGA3-209ENST00000580646 SSH1Q8WYL5 1049 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 ISCA1Q9BUE6 129 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 PCNTO95613 3336 aa12.6□□□□□ -0.39
GGA3-209ENST00000580646 MYH3P11055 1940 aa12.59□□□□□ -0.39
GGA3-209ENST00000580646 ATP5J2-PTCD1G3V325 749 aa12.59□□□□□ -0.39
GGA3-209ENST00000580646 HCLS1P14317 486 aaPredicted RBP12.59□□□□□ -0.39
GGA3-209ENST00000580646 VEGFAP15692 232 aaPredicted RBP12.59□□□□□ -0.39
GGA3-209ENST00000580646 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
GGA3-209ENST00000580646 G2E3Q7L622 706 aa12.59□□□□□ -0.39
GGA3-209ENST00000580646 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
GGA3-209ENST00000580646 ZNF277Q9NRM2 450 aaPredicted RBP12.59□□□□□ -0.39
GGA3-209ENST00000580646 SH3TC1Q8TE82 1336 aa12.59□□□□□ -0.39
GGA3-209ENST00000580646 TNRC6CQ9HCJ0 1690 aaKnown RBP12.58□□□□□ -0.4
GGA3-209ENST00000580646 PI4KAP2A4QPH2 592 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
GGA3-209ENST00000580646 SLC34A2O95436 690 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
GGA3-209ENST00000580646 FER1L6Q2WGJ9 1857 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 PI4KAP1Q8N8J0 262 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 METTL22Q9BUU2 404 aaPredicted RBP12.58□□□□□ -0.4
GGA3-209ENST00000580646 SMC4Q9NTJ3 1288 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
GGA3-209ENST00000580646 DDX60Q8IY21 1712 aaKnown RBP12.57□□□□□ -0.4
GGA3-209ENST00000580646 POTECB2RU33 542 aa12.57□□□□□ -0.4
GGA3-209ENST00000580646 PPEF1O14829 653 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms