RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 HHIPL1Q96JK4 782 aa17.85■□□□□ 0.45
CDK5RAP3-213ENST00000579605 GPRC5DQ9NZD1 345 aa17.85■□□□□ 0.45
CDK5RAP3-213ENST00000579605 NOGQ13253 232 aa17.84■□□□□ 0.45
CDK5RAP3-213ENST00000579605 PDE4DIPQ5VU43 2346 aa17.84■□□□□ 0.45
CDK5RAP3-213ENST00000579605 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
CDK5RAP3-213ENST00000579605 GNAT3A8MTJ3 354 aa17.83■□□□□ 0.44
CDK5RAP3-213ENST00000579605 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NUTM1Q86Y26 1132 aa17.83■□□□□ 0.44
CDK5RAP3-213ENST00000579605 UBR2Q8IWV8 1755 aa17.83■□□□□ 0.44
CDK5RAP3-213ENST00000579605 PPIP5K2O43314 1243 aa17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 HUNKP57058 714 aa17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 HLFQ16534 295 aa17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 DLK2Q6UY11 383 aa17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 RPGRQ92834 1020 aaKnown RBP17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 KNSTRNQ9Y448 316 aa17.82■□□□□ 0.44
CDK5RAP3-213ENST00000579605 DIAPH1O60610 1272 aaKnown RBP17.81■□□□□ 0.44
CDK5RAP3-213ENST00000579605 TRPA1O75762 1119 aa17.81■□□□□ 0.44
CDK5RAP3-213ENST00000579605 GMPSP49915 693 aaPredicted RBP17.81■□□□□ 0.44
CDK5RAP3-213ENST00000579605 AOC3Q16853 763 aa17.81■□□□□ 0.44
CDK5RAP3-213ENST00000579605 SNED1Q8TER0 1413 aa17.81■□□□□ 0.44
CDK5RAP3-213ENST00000579605 CDC37L1Q7L3B6 337 aa17.8■□□□□ 0.44
CDK5RAP3-213ENST00000579605 USP48Q86UV5 1035 aa17.8■□□□□ 0.44
CDK5RAP3-213ENST00000579605 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
CDK5RAP3-213ENST00000579605 HIRAP54198 1017 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-213ENST00000579605 KIF23Q02241 960 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-213ENST00000579605 CXCL9Q07325 125 aa17.79■□□□□ 0.44
CDK5RAP3-213ENST00000579605 TRPM7Q96QT4 1865 aa17.79■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NPC1L1Q9UHC9 1359 aa17.79■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NBPF26B4DH59 902 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 U2SURPO15042 1029 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 CRY2Q49AN0 593 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NBPF10Q6P3W6 841 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NGEFQ8N5V2 710 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 NBPF15Q8N660 670 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 RNF186Q9NXI6 227 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 PGAP2Q9UHJ9 254 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 ABCC12Q96J65 1359 aa17.78■□□□□ 0.44
CDK5RAP3-213ENST00000579605 SNRPA1P09661 255 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-213ENST00000579605 TRPM4Q8TD43 1214 aa17.77■□□□□ 0.44
CDK5RAP3-213ENST00000579605 RBM17Q96I25 401 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-213ENST00000579605 ZNRF3Q9ULT6 936 aa17.77■□□□□ 0.44
CDK5RAP3-213ENST00000579605 RAD17O75943 681 aa17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 GRIPAP1Q4V328 841 aa17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 RGMBQ6NW40 437 aa17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 NYXQ9GZU5 481 aa17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 TMX4Q9H1E5 349 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 SAGE1Q9NXZ1 904 aa17.76■□□□□ 0.43
CDK5RAP3-213ENST00000579605 SHTN1A0MZ66 631 aa17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 FAM155AB1AL88 458 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 HOXA10P31260 410 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 ZNF157P51786 506 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CTU1Q7Z7A3 348 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 ZC3H15Q8WU90 426 aaKnown RBP17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 BCORQ6W2J9 1755 aa17.75■□□□□ 0.43
CDK5RAP3-213ENST00000579605 GPTP24298 496 aa17.74■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CNOT7Q9UIV1 285 aaKnown RBP17.74■□□□□ 0.43
CDK5RAP3-213ENST00000579605 HPS5Q9UPZ3 1129 aa17.74■□□□□ 0.43
CDK5RAP3-213ENST00000579605 C2orf69Q8N8R5 385 aa17.73■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CCDC102AQ96A19 550 aa17.73■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CRAMP1Q96RY5 1269 aa17.73■□□□□ 0.43
CDK5RAP3-213ENST00000579605 H7C1D1 291 aa17.72■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CNGB1Q14028 1251 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-213ENST00000579605 TNIP1Q15025 636 aa17.72■□□□□ 0.43
CDK5RAP3-213ENST00000579605 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
CDK5RAP3-213ENST00000579605 GBA2Q9HCG7 927 aaPredicted RBP17.72■□□□□ 0.43
CDK5RAP3-213ENST00000579605 RGL2O15211 777 aa17.71■□□□□ 0.43
CDK5RAP3-213ENST00000579605 HSPA5P11021 654 aaKnown RBP17.71■□□□□ 0.43
CDK5RAP3-213ENST00000579605 AMER1Q5JTC6 1135 aaPredicted RBP17.71■□□□□ 0.43
CDK5RAP3-213ENST00000579605 GCC1Q96CN9 775 aa17.71■□□□□ 0.43
CDK5RAP3-213ENST00000579605 CSRNP1Q96S65 589 aa17.71■□□□□ 0.43
CDK5RAP3-213ENST00000579605 SUSD4Q5VX71 490 aa17.7■□□□□ 0.42
CDK5RAP3-213ENST00000579605 KRT26Q7Z3Y9 468 aa17.7■□□□□ 0.42
CDK5RAP3-213ENST00000579605 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
CDK5RAP3-213ENST00000579605 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
CDK5RAP3-213ENST00000579605 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
CDK5RAP3-213ENST00000579605 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 ADM5C9JUS6 153 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 TBC1D10BQ4KMP7 808 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 MICALL2Q8IY33 904 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 PHACTR3Q96KR7 559 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 ZBTB12Q9Y330 459 aaPredicted RBP17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 ATP6V0A2Q9Y487 856 aa17.69■□□□□ 0.42
CDK5RAP3-213ENST00000579605 EIF4G2P78344 907 aaKnown RBP eCLIP17.68■□□□□ 0.42
CDK5RAP3-213ENST00000579605 HABP4Q5JVS0 413 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-213ENST00000579605 CC2D1BQ5T0F9 858 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-213ENST00000579605 RBM26Q5T8P6 1007 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-213ENST00000579605 MCM10Q7L590 875 aa17.68■□□□□ 0.42
CDK5RAP3-213ENST00000579605 TTLL7Q6ZT98 887 aa17.67■□□□□ 0.42
CDK5RAP3-213ENST00000579605 ZBTB3Q9H5J0 574 aa17.67■□□□□ 0.42
CDK5RAP3-213ENST00000579605 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-213ENST00000579605 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
CDK5RAP3-213ENST00000579605 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
CDK5RAP3-213ENST00000579605 KIF6Q6ZMV9 814 aa17.66■□□□□ 0.42
CDK5RAP3-213ENST00000579605 MPNDQ8N594 471 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms