RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
CTC1-204ENST00000578441 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 POTEIP0CG38 1075 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 POTEJP0CG39 1038 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 MAP2K1Q02750 393 aaPredicted RBP13.31□□□□□ -0.28
CTC1-204ENST00000578441 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 GIGYF2Q6Y7W6 1299 aaKnown RBP13.31□□□□□ -0.28
CTC1-204ENST00000578441 JDP2Q8WYK2 163 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
CTC1-204ENST00000578441 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 ABCC12Q96J65 1359 aa13.31□□□□□ -0.28
CTC1-204ENST00000578441 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 LBX1P52954 281 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 PPP1R42Q7Z4L9 355 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 ZNF34Q8IZ26 560 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 SYNE4Q8N205 404 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 RRP7AQ9Y3A4 280 aaKnown RBP13.3□□□□□ -0.28
CTC1-204ENST00000578441 ZNF541Q9H0D2 1346 aa13.3□□□□□ -0.28
CTC1-204ENST00000578441 EPHX2P34913 555 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 RALBP1Q15311 655 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 NUTM1Q86Y26 1132 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 RBM17Q96I25 401 aaKnown RBP13.29□□□□□ -0.28
CTC1-204ENST00000578441 VPS33BQ9H267 617 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
CTC1-204ENST00000578441 ANKRD36CQ5JPF3 1778 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 NTSR2O95665 410 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 HSPA8P11142 646 aaKnown RBP13.28□□□□□ -0.28
CTC1-204ENST00000578441 MYL6BP14649 208 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 FAM161AQ3B820 660 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 OLFM4Q6UX06 510 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 TSPYL4Q9UJ04 414 aa13.28□□□□□ -0.28
CTC1-204ENST00000578441 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
CTC1-204ENST00000578441 MLLT1Q03111 559 aaPredicted RBP13.27□□□□□ -0.29
CTC1-204ENST00000578441 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
CTC1-204ENST00000578441 SUSD4Q5VX71 490 aa13.27□□□□□ -0.29
CTC1-204ENST00000578441 NLRP3Q96P20 1036 aa13.27□□□□□ -0.29
CTC1-204ENST00000578441 THUMPD2Q9BTF0 503 aaKnown RBP13.27□□□□□ -0.29
CTC1-204ENST00000578441 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
CTC1-204ENST00000578441 ZBTB3Q9H5J0 574 aa13.27□□□□□ -0.29
CTC1-204ENST00000578441 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
CTC1-204ENST00000578441 GPTP24298 496 aa13.26□□□□□ -0.29
CTC1-204ENST00000578441 EAPPQ56P03 285 aaPredicted RBP13.26□□□□□ -0.29
CTC1-204ENST00000578441 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
CTC1-204ENST00000578441 SLC10A5Q5PT55 438 aa13.26□□□□□ -0.29
CTC1-204ENST00000578441 LRP10Q7Z4F1 713 aa13.26□□□□□ -0.29
CTC1-204ENST00000578441 WDR33Q9C0J8 1336 aaKnown RBP13.25□□□□□ -0.29
CTC1-204ENST00000578441 LMOD1P29536 600 aaPredicted RBP13.25□□□□□ -0.29
CTC1-204ENST00000578441 RIPK4P57078 832 aa13.25□□□□□ -0.29
CTC1-204ENST00000578441 PDIA6Q15084 440 aa13.25□□□□□ -0.29
CTC1-204ENST00000578441 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
CTC1-204ENST00000578441 LARGE2Q8N3Y3 721 aa13.25□□□□□ -0.29
CTC1-204ENST00000578441 UTP14AQ9BVJ6 771 aaKnown RBP13.25□□□□□ -0.29
CTC1-204ENST00000578441 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
CTC1-204ENST00000578441 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
CTC1-204ENST00000578441 SUPT20HQ8NEM7 779 aa13.24□□□□□ -0.29
CTC1-204ENST00000578441 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
CTC1-204ENST00000578441 COL4A5P29400 1685 aa13.24□□□□□ -0.29
CTC1-204ENST00000578441 LAMB2P55268 1798 aa13.23□□□□□ -0.29
CTC1-204ENST00000578441 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
CTC1-204ENST00000578441 BBOX1O75936 387 aa13.23□□□□□ -0.29
CTC1-204ENST00000578441 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
CTC1-204ENST00000578441 NIM1KQ8IY84 436 aa13.23□□□□□ -0.29
CTC1-204ENST00000578441 RTFDC1Q9BY42 306 aaPredicted RBP13.23□□□□□ -0.29
CTC1-204ENST00000578441 THSD7BQ9C0I4 1608 aa13.23□□□□□ -0.29
CTC1-204ENST00000578441 LTBP1Q14766 1721 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 HOXB7P09629 217 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 ECE1P42892 770 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 SCNN1DP51172 638 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 MAP1SQ66K74 1059 aaPredicted RBP13.22□□□□□ -0.29
CTC1-204ENST00000578441 TMC4Q7Z404 712 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
CTC1-204ENST00000578441 TRPM7Q96QT4 1865 aa13.21□□□□□ -0.29
CTC1-204ENST00000578441 ABCC4O15439 1325 aa13.21□□□□□ -0.29
CTC1-204ENST00000578441 PPIP5K2O43314 1243 aa13.21□□□□□ -0.29
CTC1-204ENST00000578441 EIF2S2P20042 333 aaKnown RBP13.21□□□□□ -0.29
CTC1-204ENST00000578441 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
CTC1-204ENST00000578441 DDX21Q9NR30 783 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTC1-204ENST00000578441 ZNRF3Q9ULT6 936 aa13.21□□□□□ -0.29
CTC1-204ENST00000578441 MYBBP1AQ9BQG0 1328 aaKnown RBP13.2□□□□□ -0.3
CTC1-204ENST00000578441 LRRC37AA6NMS7 1700 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 CHL1O00533 1208 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 C3orf67Q6ZVT6 689 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 NLRP10Q86W26 655 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 BEGAINQ9BUH8 593 aa13.2□□□□□ -0.3
CTC1-204ENST00000578441 ADARB2Q9NS39 739 aaKnown RBP13.2□□□□□ -0.3
CTC1-204ENST00000578441 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 CA12O43570 354 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 MAP2K2P36507 400 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
CTC1-204ENST00000578441 DDX46Q7L014 1031 aaKnown RBP13.19□□□□□ -0.3
CTC1-204ENST00000578441 XAGE3Q8WTP9 111 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 GPRC5DQ9NZD1 345 aa13.19□□□□□ -0.3
CTC1-204ENST00000578441 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms