RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 ISCA1Q9BUE6 129 aa16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 METTL22Q9BUU2 404 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 MAP3K2Q9Y2U5 619 aa16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.182e-6■■■□□ 17
CSNK1D-207ENST00000578194 KCNA3P22001 575 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 TRIM28Q13263 835 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 ERFEQ4G0M1 354 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 MYD88Q99836 296 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 WWC3Q9ULE0 1092 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 BCS1LQ9Y276 419 aa16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
CSNK1D-207ENST00000578194 SH3TC1Q8TE82 1336 aa16.19■□□□□ 0.18
CSNK1D-207ENST00000578194 ADCY9O60503 1353 aa16.19■□□□□ 0.18
CSNK1D-207ENST00000578194 ABCC12Q96J65 1359 aa16.19■□□□□ 0.18
CSNK1D-207ENST00000578194 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
CSNK1D-207ENST00000578194 STYK1Q6J9G0 422 aa16.19■□□□□ 0.18
CSNK1D-207ENST00000578194 ZNF622Q969S3 477 aaKnown RBP eCLIP16.19■□□□□ 0.189e-8■□□□□ 10
CSNK1D-207ENST00000578194 ALDH1L2Q3SY69 923 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 CCDC191Q8NCU4 936 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 CNKSR1Q969H4 720 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 LAMB2P55268 1798 aa16.18■□□□□ 0.18
CSNK1D-207ENST00000578194 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 SRGNP10124 158 aa16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 HSP90B1P14625 803 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 NPR1P16066 1061 aa16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 SLC10A5Q5PT55 438 aa16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-207ENST00000578194 SRCAPQ6ZRS2 3230 aa16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 SSH1Q8WYL5 1049 aa16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 NLRP3Q96P20 1036 aa16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 SMC4Q9NTJ3 1288 aa16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 DDX60Q8IY21 1712 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-207ENST00000578194 MRPL50Q8N5N7 158 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-207ENST00000578194 SLX4Q8IY92 1834 aa16.15■□□□□ 0.18
CSNK1D-207ENST00000578194 ALDH1B1P30837 517 aa16.14■□□□□ 0.17
CSNK1D-207ENST00000578194 CRY2Q49AN0 593 aa16.14■□□□□ 0.17
CSNK1D-207ENST00000578194 ZBTB38Q8NAP3 1195 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-207ENST00000578194 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
CSNK1D-207ENST00000578194 PTPRCP08575 1304 aa16.14■□□□□ 0.17
CSNK1D-207ENST00000578194 PCCAP05165 728 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-207ENST00000578194 IGKV5-2P06315 115 aa16.13■□□□□ 0.17
CSNK1D-207ENST00000578194 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
CSNK1D-207ENST00000578194 RBM17Q96I25 401 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-207ENST00000578194 BCL2L13Q9BXK5 485 aa16.13■□□□□ 0.17
CSNK1D-207ENST00000578194 MYH3P11055 1940 aa16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 NEURL1BA8MQ27 555 aa16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 HCLS1P14317 486 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 HOXA10P31260 410 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 SOGA3Q5TF21 947 aa16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
CSNK1D-207ENST00000578194 F6X3S4 739 aa16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 CWF19L2Q2TBE0 894 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 SYNE4Q8N205 404 aa16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 CRAMP1Q96RY5 1269 aa16.11■□□□□ 0.17
CSNK1D-207ENST00000578194 RARSP54136 660 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 BRPF1P55201 1214 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 GCKRQ14397 625 aa16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 SLC4A10Q6U841 1118 aa16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 C3orf67Q6ZVT6 689 aa16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 CDHR2Q9BYE9 1310 aa16.1■□□□□ 0.17
CSNK1D-207ENST00000578194 C21orf2O43822 256 aa16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 ALDH1L1O75891 902 aa16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 BEND3Q5T5X7 828 aa16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 KIF16BQ96L93 1317 aa16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
CSNK1D-207ENST00000578194 PDE8AO60658 829 aa16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 SF3B3Q15393 1217 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 UBE3BQ7Z3V4 1068 aa16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 SRCIN1Q9C0H9 1055 aa16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 SBF1O95248 1867 aa16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 CCDC88AQ3V6T2 1871 aa16.08■□□□□ 0.16
CSNK1D-207ENST00000578194 H7C1W4 665 aa16.07■□□□□ 0.16
CSNK1D-207ENST00000578194 YY1P25490 414 aa16.07■□□□□ 0.16
CSNK1D-207ENST00000578194 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
CSNK1D-207ENST00000578194 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
CSNK1D-207ENST00000578194 TAF1P21675 1872 aa16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 ABCC4O15439 1325 aa16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 PPEF1O14829 653 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 IPO8O15397 1037 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 CCDC152Q4G0S7 254 aa16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 JARID2Q92833 1246 aaPredicted RBP16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 NOB1Q9ULX3 412 aaKnown RBP16.06■□□□□ 0.16
CSNK1D-207ENST00000578194 BBOX1O75936 387 aa16.05■□□□□ 0.16
CSNK1D-207ENST00000578194 GRAPQ13588 217 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms