RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MCOLN1Q9GZU1 580 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 SMC4Q9NTJ3 1288 aa14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 MYH14Q7Z406 1995 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-204ENST00000577664 KIF16BQ96L93 1317 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 IPO8O15397 1037 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 LDHDQ86WU2 507 aa14.21□□□□□ -0.13
CDK5RAP3-204ENST00000577664 DICER1Q9UPY3 1922 aaKnown RBP14.21□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NFKBIEO00221 500 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PROSER3Q2NL68 480 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ZBTB1Q9Y2K1 713 aa14.2□□□□□ -0.14
CDK5RAP3-204ENST00000577664 FLIIQ13045 1269 aa14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 G2E3Q7L622 706 aa14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PHAXQ9H814 394 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NOB1Q9ULX3 412 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 IBTKQ9P2D0 1353 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ERVV-1B6SEH8 477 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ZKSCAN2Q63HK3 967 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ATF7IPQ6VMQ6 1270 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 COPS6Q7L5N1 327 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 NECTIN2Q92692 538 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 BCL2L13Q9BXK5 485 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DLEC1Q9Y238 1755 aa14.18□□□□□ -0.14
CDK5RAP3-204ENST00000577664 A0A087WZG4 1122 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 TCERG1O14776 1098 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 MS4A1P11836 297 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 RFC4P35249 363 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 RRP1P56182 461 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DDR1Q08345 913 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 KSR2Q6VAB6 950 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ANKRD13DQ6ZTN6 518 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 API5Q9BZZ5 524 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 LTBP1Q14766 1721 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 SCN4AP35499 1836 aa14.17□□□□□ -0.14
CDK5RAP3-204ENST00000577664 DDX58O95786 925 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ANXA1P04083 346 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 MYL6BP14649 208 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 CANXP27824 592 aaKnown RBP14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 PLBD2Q8NHP8 589 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 XAGE3Q8WTP9 111 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 BEGAINQ9BUH8 593 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ADAMTSL1Q8N6G6 1762 aa14.16□□□□□ -0.14
CDK5RAP3-204ENST00000577664 IQCA1LA6NCM1 817 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 TRIM27P14373 513 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 L3MBTL3Q96JM7 780 aaPredicted RBP14.15□□□□□ -0.14
CDK5RAP3-204ENST00000577664 ABCC4O15439 1325 aa14.15□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PI4KAP2A4QPH2 592 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 POLRMTO00411 1230 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 INTS3Q68E01 1043 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PI4KAP1Q8N8J0 262 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NARFQ9UHQ1 456 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 MAP3K15Q6ZN16 1313 aa14.14□□□□□ -0.15
CDK5RAP3-204ENST00000577664 COL15A1P39059 1388 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DDNO94850 711 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TM4SF1P30408 202 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FKBP5Q13451 457 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ERFEQ4G0M1 354 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TTLL7Q6ZT98 887 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GCC1Q96CN9 775 aa14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TAF1DQ9H5J8 278 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CA12O43570 354 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FKBP8Q14318 412 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DZIP3Q86Y13 1208 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DZIP1LQ8IYY4 767 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FRAT1Q92837 279 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 METTL22Q9BUU2 404 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 FER1L6Q2WGJ9 1857 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 LTBP3Q9NS15 1303 aa14.12□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 PLIN1O60240 522 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 AIMP1Q12904 312 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 TCIRG1Q13488 830 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 DGKZQ13574 1117 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 BEND3Q5T5X7 828 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 NPM2Q86SE8 214 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 MAP3K2Q9Y2U5 619 aa14.11□□□□□ -0.15
CDK5RAP3-204ENST00000577664 RLBP1P12271 317 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ECE1P42892 770 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CCT4P50991 539 aaKnown RBP14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 HSP90AB3PQ58FF7 597 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 LINS1Q8NG48 757 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 CAPNS2Q96L46 248 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 GPR101Q96P66 508 aaPredicted RBP14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ISCA1Q9BUE6 129 aa14.1□□□□□ -0.15
CDK5RAP3-204ENST00000577664 F6X3S4 739 aa14.09□□□□□ -0.15
CDK5RAP3-204ENST00000577664 ALDH1L1O75891 902 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms