RNA–Protein interactions for RNA: ENST00000576894.5

SRRM2-229, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,210 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-229ENST00000576894 PRPF40BQ6NWY9 871 aaKnown RBP24.85■■□□□ 1.57
SRRM2-229ENST00000576894 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
SRRM2-229ENST00000576894 COL15A1P39059 1388 aa24.85■■□□□ 1.57
SRRM2-229ENST00000576894 CSB-PGBD3P0DP91 1061 aa24.85■■□□□ 1.57
SRRM2-229ENST00000576894 TMEM87AQ8NBN3 555 aa24.85■■□□□ 1.57
SRRM2-229ENST00000576894 MAP4K1Q92918 833 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 JAKMIP1Q96N16 626 aaKnown RBP24.84■■□□□ 1.57
SRRM2-229ENST00000576894 TLR7Q9NYK1 1049 aaKnown RBP24.84■■□□□ 1.57
SRRM2-229ENST00000576894 PKD1L3Q7Z443 1732 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 ADCK5Q3MIX3 580 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 TTC5Q8N0Z6 440 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 ZSCAN31Q96LW9 406 aaPredicted RBP24.84■■□□□ 1.57
SRRM2-229ENST00000576894 FMNL2Q96PY5 1086 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 COPRSQ9NQ92 184 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 PDRG1Q9NUG6 133 aa24.84■■□□□ 1.57
SRRM2-229ENST00000576894 SYCE3A1L190 88 aa24.83■■□□□ 1.57
SRRM2-229ENST00000576894 ZSCAN22P10073 491 aaPredicted RBP24.83■■□□□ 1.57
SRRM2-229ENST00000576894 CPA1P15085 419 aa24.83■■□□□ 1.57
SRRM2-229ENST00000576894 NMIQ13287 307 aaPredicted RBP24.83■■□□□ 1.57
SRRM2-229ENST00000576894 SIL1Q9H173 461 aa24.83■■□□□ 1.57
SRRM2-229ENST00000576894 CYP46A1Q9Y6A2 500 aa24.83■■□□□ 1.57
SRRM2-229ENST00000576894 PIP4K2AP48426 406 aaPredicted RBP24.82■■□□□ 1.56
SRRM2-229ENST00000576894 FAM227BQ96M60 508 aa24.82■■□□□ 1.56
SRRM2-229ENST00000576894 RBM8AQ9Y5S9 174 aaKnown RBP24.82■■□□□ 1.56
SRRM2-229ENST00000576894 SH2B1Q9NRF2 756 aaPredicted RBP24.82■■□□□ 1.56
SRRM2-229ENST00000576894 CPDO75976 1380 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 RFX5P48382 616 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-229ENST00000576894 CREB3L3Q68CJ9 461 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 USP48Q86UV5 1035 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 KLHDC4Q8TBB5 520 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 PDLIM2Q96JY6 352 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 SMC3Q9UQE7 1217 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 STX6O43752 255 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 LARGE1O95461 756 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 ZKSCAN1P17029 563 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-229ENST00000576894 SYT1P21579 422 aa24.81■■□□□ 1.56
SRRM2-229ENST00000576894 RABL6Q3YEC7 729 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-229ENST00000576894 SYAP1Q96A49 352 aaPredicted RBP24.81■■□□□ 1.56
SRRM2-229ENST00000576894 LARP6Q9BRS8 491 aaKnown RBP24.81■■□□□ 1.56
SRRM2-229ENST00000576894 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
SRRM2-229ENST00000576894 BOLA2Q9H3K6 86 aa24.8■■□□□ 1.56
SRRM2-229ENST00000576894 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
SRRM2-229ENST00000576894 SPATA31A3Q5VYP0 1347 aa24.8■■□□□ 1.56
SRRM2-229ENST00000576894 MED23Q9ULK4 1368 aa24.79■■□□□ 1.56
SRRM2-229ENST00000576894 GADD45BO75293 160 aaPredicted RBP24.78■■□□□ 1.56
SRRM2-229ENST00000576894 HS1BP3Q53T59 392 aa24.78■■□□□ 1.56
SRRM2-229ENST00000576894 A0A0D9SFI3 127 aa24.78■■□□□ 1.56
SRRM2-229ENST00000576894 PTPN12Q05209 780 aaKnown RBP24.78■■□□□ 1.56
SRRM2-229ENST00000576894 FSD1Q9BTV5 496 aa24.78■■□□□ 1.56
SRRM2-229ENST00000576894 JCADQ9P266 1359 aa24.78■■□□□ 1.56
SRRM2-229ENST00000576894 GLI3P10071 1580 aa24.78■■□□□ 1.56
SRRM2-229ENST00000576894 SLC27A2O14975 620 aa24.77■■□□□ 1.56
SRRM2-229ENST00000576894 CABP4P57796 275 aa24.77■■□□□ 1.56
SRRM2-229ENST00000576894 GDPD2Q9HCC8 539 aa24.77■■□□□ 1.56
SRRM2-229ENST00000576894 F13A1P00488 732 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 ATP5JP18859 108 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 PSMA5P28066 241 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 FOXD4L6Q3SYB3 417 aaPredicted RBP24.76■■□□□ 1.55
SRRM2-229ENST00000576894 FOXD4L3Q6VB84 417 aaPredicted RBP24.76■■□□□ 1.55
SRRM2-229ENST00000576894 ZSCAN30Q86W11 494 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 CCDC83Q8IWF9 413 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 JARID2Q92833 1246 aaPredicted RBP24.76■■□□□ 1.55
SRRM2-229ENST00000576894 PARP4Q9UKK3 1724 aaKnown RBP24.76■■□□□ 1.55
SRRM2-229ENST00000576894 CASP7P55210 303 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 PLBD2Q8NHP8 589 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 ATP6V1DQ9Y5K8 247 aa24.76■■□□□ 1.55
SRRM2-229ENST00000576894 KCNJ4P48050 445 aa24.75■■□□□ 1.55
SRRM2-229ENST00000576894 ST3GAL1Q11201 340 aa24.75■■□□□ 1.55
SRRM2-229ENST00000576894 ALDH8A1Q9H2A2 487 aaPredicted RBP24.75■■□□□ 1.55
SRRM2-229ENST00000576894 PHF14O94880 888 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 GJB2P29033 226 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 TNNI3KQ59H18 835 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 FPGT-TNNI3KV9GXZ4 949 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 ME3Q16798 604 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 TSGA10IPQ3SY00 556 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 RNF20Q5VTR2 975 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 UBE3BQ7Z3V4 1068 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 TSPY26PQ9H489 355 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 DBNLQ9UJU6 430 aaKnown RBP24.74■■□□□ 1.55
SRRM2-229ENST00000576894 CNPY2Q9Y2B0 182 aa24.74■■□□□ 1.55
SRRM2-229ENST00000576894 LAMB4A4D0S4 1761 aa24.73■■□□□ 1.55
SRRM2-229ENST00000576894 HSPA2P54652 639 aa24.73■■□□□ 1.55
SRRM2-229ENST00000576894 MTMR6Q9Y217 621 aa24.73■■□□□ 1.55
SRRM2-229ENST00000576894 TFCP2Q12800 502 aa24.73■■□□□ 1.55
SRRM2-229ENST00000576894 RFX7Q2KHR2 1363 aa24.72■■□□□ 1.55
SRRM2-229ENST00000576894 A0A087WZG4 1122 aa24.72■■□□□ 1.55
SRRM2-229ENST00000576894 UBE2Q2Q8WVN8 375 aa24.72■■□□□ 1.55
SRRM2-229ENST00000576894 AFDNP55196 1824 aaKnown RBP24.72■■□□□ 1.55
SRRM2-229ENST00000576894 HMG20BQ9P0W2 317 aa24.71■■□□□ 1.55
SRRM2-229ENST00000576894 TPCN1Q9ULQ1 816 aa24.71■■□□□ 1.55
SRRM2-229ENST00000576894 ATP5J2-PTCD1G3V325 749 aa24.7■■□□□ 1.55
SRRM2-229ENST00000576894 PTCD1O75127 700 aaKnown RBP24.7■■□□□ 1.55
SRRM2-229ENST00000576894 TAF5LO75529 589 aa24.7■■□□□ 1.55
SRRM2-229ENST00000576894 UBE2HP62256 183 aa24.7■■□□□ 1.55
SRRM2-229ENST00000576894 USPL1Q5W0Q7 1092 aa24.7■■□□□ 1.55
SRRM2-229ENST00000576894 ZNF589Q86UQ0 364 aaPredicted RBP24.7■■□□□ 1.55
SRRM2-229ENST00000576894 PDIA4P13667 645 aaKnown RBP24.7■■□□□ 1.54
SRRM2-229ENST00000576894 ANKRD1Q15327 319 aa24.7■■□□□ 1.54
SRRM2-229ENST00000576894 DDX54Q8TDD1 881 aaKnown RBP24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms