RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	EXOSC9	Q06265	439 aa	Known RBP	32.54	■■■□□ 2.8
SRRM2-223	ENST00000575701	NLRP10	Q86W26	655 aa		32.54	■■■□□ 2.8
SRRM2-223	ENST00000575701	RIC3	Q7Z5B4	369 aa		32.53	■■■□□ 2.8
SRRM2-223	ENST00000575701	MIER1	Q8N108	512 aa		32.53	■■■□□ 2.8
SRRM2-223	ENST00000575701	CACNA1F	O60840	1977 aa		32.51	■■■□□ 2.8
SRRM2-223	ENST00000575701	VAMP4	O75379	141 aa		32.5	■■■□□ 2.79
SRRM2-223	ENST00000575701	CRY2	Q49AN0	593 aa		32.5	■■■□□ 2.79
SRRM2-223	ENST00000575701	ISCA1	Q9BUE6	129 aa		32.5	■■■□□ 2.79
SRRM2-223	ENST00000575701		E9PSI1	815 aa		32.48	■■■□□ 2.79
SRRM2-223	ENST00000575701	TRIM28	Q13263	835 aa	Known RBP	32.48	■■■□□ 2.79
SRRM2-223	ENST00000575701	SLC10A5	Q5PT55	438 aa		32.48	■■■□□ 2.79
SRRM2-223	ENST00000575701	CACNA1S	Q13698	1873 aa		32.48	■■■□□ 2.79
SRRM2-223	ENST00000575701	ADCY9	O60503	1353 aa		32.47	■■■□□ 2.79
SRRM2-223	ENST00000575701	SLC4A2	P04920	1241 aa		32.47	■■■□□ 2.79
SRRM2-223	ENST00000575701	PRPF40B	Q6NWY9	871 aa	Known RBP	32.47	■■■□□ 2.79
SRRM2-223	ENST00000575701	TRMT112	Q9UI30	125 aa	Known RBP	32.47	■■■□□ 2.79
SRRM2-223	ENST00000575701	SH3TC1	Q8TE82	1336 aa		32.47	■■■□□ 2.79
SRRM2-223	ENST00000575701	ALDH1B1	P30837	517 aa		32.46	■■■□□ 2.79
SRRM2-223	ENST00000575701	SOGA3	Q5TF21	947 aa		32.46	■■■□□ 2.79
SRRM2-223	ENST00000575701	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.46	■■■□□ 2.79
SRRM2-223	ENST00000575701	NLRP3	Q96P20	1036 aa		32.45	■■■□□ 2.79
SRRM2-223	ENST00000575701	SLX4	Q8IY92	1834 aa		32.44	■■■□□ 2.78
SRRM2-223	ENST00000575701	TCERG1	O14776	1098 aa	Known RBP	32.44	■■■□□ 2.78
SRRM2-223	ENST00000575701	KSR2	Q6VAB6	950 aa		32.44	■■■□□ 2.78
SRRM2-223	ENST00000575701	RPGR	Q92834	1020 aa	Known RBP	32.44	■■■□□ 2.78
SRRM2-223	ENST00000575701	ATP5J2-PTCD1	G3V325	749 aa		32.43	■■■□□ 2.78
SRRM2-223	ENST00000575701	C21orf2	O43822	256 aa		32.42	■■■□□ 2.78
SRRM2-223	ENST00000575701	HOXA10	P31260	410 aa	Predicted RBP	32.42	■■■□□ 2.78
SRRM2-223	ENST00000575701	METTL22	Q9BUU2	404 aa	Predicted RBP	32.42	■■■□□ 2.78
SRRM2-223	ENST00000575701	MYD88	Q99836	296 aa		32.41	■■■□□ 2.78
SRRM2-223	ENST00000575701	MAP3K2	Q9Y2U5	619 aa		32.41	■■■□□ 2.78
SRRM2-223	ENST00000575701	SLFN5	Q08AF3	891 aa		32.4	■■■□□ 2.78
SRRM2-223	ENST00000575701	FLII	Q13045	1269 aa		32.4	■■■□□ 2.78
SRRM2-223	ENST00000575701	CCDC191	Q8NCU4	936 aa		32.4	■■■□□ 2.78
SRRM2-223	ENST00000575701	PI4KAP2	A4QPH2	592 aa		32.39	■■■□□ 2.78
SRRM2-223	ENST00000575701	PI4KAP1	Q8N8J0	262 aa		32.39	■■■□□ 2.78
SRRM2-223	ENST00000575701	RBM17	Q96I25	401 aa	Known RBP	32.39	■■■□□ 2.78
SRRM2-223	ENST00000575701	SBF1	O95248	1867 aa		32.39	■■■□□ 2.78
SRRM2-223	ENST00000575701	FER1L6	Q2WGJ9	1857 aa		32.39	■■■□□ 2.78
SRRM2-223	ENST00000575701	LAMB2	P55268	1798 aa		32.38	■■■□□ 2.77
SRRM2-223	ENST00000575701	NEXN	Q0ZGT2	675 aa		32.38	■■■□□ 2.77
SRRM2-223	ENST00000575701	G2E3	Q7L622	706 aa		32.38	■■■□□ 2.77
SRRM2-223	ENST00000575701	CRAMP1	Q96RY5	1269 aa		32.38	■■■□□ 2.77
SRRM2-223	ENST00000575701	C9orf131	Q5VYM1	1079 aa		32.37	■■■□□ 2.77
SRRM2-223	ENST00000575701	ZNF219	Q9P2Y4	722 aa	Predicted RBP	32.37	■■■□□ 2.77
SRRM2-223	ENST00000575701	DDX60	Q8IY21	1712 aa	Known RBP	32.37	■■■□□ 2.77
SRRM2-223	ENST00000575701	LTBP3	Q9NS15	1303 aa		32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	NFKBIE	O00221	500 aa		32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	HSP90B1	P14625	803 aa	Known RBP	32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	FKBP5	Q13451	457 aa	Predicted RBP	32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	C7orf43	Q8WVR3	580 aa		32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	CWC25	Q9NXE8	425 aa	Predicted RBP	32.36	■■■□□ 2.77
SRRM2-223	ENST00000575701	HCLS1	P14317	486 aa	Predicted RBP	32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	LMNB1	P20700	586 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	RASSF7	Q02833	373 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	CCDC93	Q567U6	631 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	C3orf67	Q6ZVT6	689 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	FAM89A	Q96GI7	184 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	RNF181	Q9P0P0	153 aa		32.35	■■■□□ 2.77
SRRM2-223	ENST00000575701	SYNE4	Q8N205	404 aa		32.34	■■■□□ 2.77
SRRM2-223	ENST00000575701	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.33	■■■□□ 2.77
SRRM2-223	ENST00000575701	ZNF428	Q96B54	188 aa		32.33	■■■□□ 2.77
SRRM2-223	ENST00000575701	TAOK3	Q9H2K8	898 aa		32.33	■■■□□ 2.77
SRRM2-223	ENST00000575701	CC2D2B	Q6DHV5	1058 aa		32.32	■■■□□ 2.76
SRRM2-223	ENST00000575701	PCCA	P05165	728 aa	Predicted RBP	32.31	■■■□□ 2.76
SRRM2-223	ENST00000575701	TRMT2A	Q8IZ69	625 aa	Known RBP	32.31	■■■□□ 2.76
SRRM2-223	ENST00000575701	RTKN2	Q8IZC4	609 aa		32.31	■■■□□ 2.76
SRRM2-223	ENST00000575701	CDCA7L	Q96GN5	454 aa		32.31	■■■□□ 2.76
SRRM2-223	ENST00000575701	IRS4	O14654	1257 aa	Predicted RBP	32.3	■■■□□ 2.76
SRRM2-223	ENST00000575701	GRIPAP1	Q4V328	841 aa		32.3	■■■□□ 2.76
SRRM2-223	ENST00000575701	DNAAF4	Q8WXU2	420 aa		32.3	■■■□□ 2.76
SRRM2-223	ENST00000575701	IGKV5-2	P06315	115 aa		32.29	■■■□□ 2.76
SRRM2-223	ENST00000575701	PPEF1	O14829	653 aa	Predicted RBP	32.28	■■■□□ 2.76
SRRM2-223	ENST00000575701	SF3B3	Q15393	1217 aa	Known RBP	32.28	■■■□□ 2.76
SRRM2-223	ENST00000575701	DDX46	Q7L014	1031 aa	Known RBP	32.28	■■■□□ 2.76
SRRM2-223	ENST00000575701	ABCC4	O15439	1325 aa		32.27	■■■□□ 2.76
SRRM2-223	ENST00000575701	CCDC88A	Q3V6T2	1871 aa		32.27	■■■□□ 2.76
SRRM2-223	ENST00000575701	RTL5	Q5HYW3	569 aa	Predicted RBP	32.27	■■■□□ 2.76
SRRM2-223	ENST00000575701	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.27	■■■□□ 2.76
SRRM2-223	ENST00000575701	CDHR2	Q9BYE9	1310 aa		32.26	■■■□□ 2.76
SRRM2-223	ENST00000575701	TIAM2	Q8IVF5	1701 aa		32.26	■■■□□ 2.76
SRRM2-223	ENST00000575701	NEURL1B	A8MQ27	555 aa		32.26	■■■□□ 2.75
SRRM2-223	ENST00000575701	CT47B1	P0C2W7	299 aa	Predicted RBP	32.26	■■■□□ 2.75
SRRM2-223	ENST00000575701	DICER1	Q9UPY3	1922 aa	Known RBP	32.26	■■■□□ 2.75
SRRM2-223	ENST00000575701	BBOX1	O75936	387 aa		32.25	■■■□□ 2.75
SRRM2-223	ENST00000575701	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.25	■■■□□ 2.75
SRRM2-223	ENST00000575701	LINS1	Q8NG48	757 aa		32.25	■■■□□ 2.75
SRRM2-223	ENST00000575701	TMX4	Q9H1E5	349 aa	Predicted RBP	32.25	■■■□□ 2.75
SRRM2-223	ENST00000575701	SNED1	Q8TER0	1413 aa		32.25	■■■□□ 2.75
SRRM2-223	ENST00000575701	PRELP	P51888	382 aa		32.24	■■■□□ 2.75
SRRM2-223	ENST00000575701	GRAP	Q13588	217 aa		32.24	■■■□□ 2.75
SRRM2-223	ENST00000575701	GRAPL	Q8TC17	118 aa	Predicted RBP	32.24	■■■□□ 2.75
SRRM2-223	ENST00000575701	CWF19L2	Q2TBE0	894 aa	Known RBP	32.23	■■■□□ 2.75
SRRM2-223	ENST00000575701	TMC4	Q7Z404	712 aa		32.23	■■■□□ 2.75
SRRM2-223	ENST00000575701	PDE8A	O60658	829 aa		32.22	■■■□□ 2.75
SRRM2-223	ENST00000575701	PSMD1	Q99460	953 aa		32.22	■■■□□ 2.75
SRRM2-223	ENST00000575701	ATP6V0A2	Q9Y487	856 aa		32.22	■■■□□ 2.75
SRRM2-223	ENST00000575701	HNRNPU	Q00839	825 aa	Known RBP eCLIP	32.21	■■■□□ 2.75
SRRM2-223	ENST00000575701	ALDH1L2	Q3SY69	923 aa		32.21	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms