RNA–Protein interactions for RNA: ENST00000575515.1

NDC80-204, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 5

Gene NDC80, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-204ENST00000575515 EPS15P42566 896 aa13.29□□□□□ -0.28
NDC80-204ENST00000575515 CST9Q5W186 159 aa13.29□□□□□ -0.28
NDC80-204ENST00000575515 NUP98P52948 1817 aa13.29□□□□□ -0.28
NDC80-204ENST00000575515 AKAP11Q9UKA4 1901 aa13.29□□□□□ -0.28
NDC80-204ENST00000575515 SCNN1DP51172 638 aa13.28□□□□□ -0.28
NDC80-204ENST00000575515 CLEC4GQ6UXB4 293 aa13.28□□□□□ -0.28
NDC80-204ENST00000575515 USP50Q70EL3 339 aaPredicted RBP13.28□□□□□ -0.28
NDC80-204ENST00000575515 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
NDC80-204ENST00000575515 PSMD1Q99460 953 aa13.28□□□□□ -0.28
NDC80-204ENST00000575515 NIP7Q9Y221 180 aaKnown RBP eCLIP13.28□□□□□ -0.28
NDC80-204ENST00000575515 KLRG2A4D1S0 409 aaPredicted RBP13.27□□□□□ -0.29
NDC80-204ENST00000575515 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
NDC80-204ENST00000575515 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
NDC80-204ENST00000575515 BRPF1P55201 1214 aaPredicted RBP13.27□□□□□ -0.29
NDC80-204ENST00000575515 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 DIAPH1O60610 1272 aaKnown RBP13.26□□□□□ -0.29
NDC80-204ENST00000575515 CIAPIN1Q6FI81 312 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 SAPCD2Q86UD0 394 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 ZNF408Q9H9D4 720 aa13.26□□□□□ -0.29
NDC80-204ENST00000575515 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
NDC80-204ENST00000575515 SOX10P56693 466 aa13.25□□□□□ -0.29
NDC80-204ENST00000575515 CNGB1Q14028 1251 aaPredicted RBP13.25□□□□□ -0.29
NDC80-204ENST00000575515 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
NDC80-204ENST00000575515 NIM1KQ8IY84 436 aa13.25□□□□□ -0.29
NDC80-204ENST00000575515 GAS2L2Q8NHY3 880 aa13.25□□□□□ -0.29
NDC80-204ENST00000575515 RPGRQ92834 1020 aaKnown RBP13.25□□□□□ -0.29
NDC80-204ENST00000575515 KCNQ3O43525 872 aa13.24□□□□□ -0.29
NDC80-204ENST00000575515 ADARB2Q9NS39 739 aaKnown RBP13.24□□□□□ -0.29
NDC80-204ENST00000575515 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
NDC80-204ENST00000575515 ABCC12Q96J65 1359 aa13.23□□□□□ -0.29
NDC80-204ENST00000575515 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
NDC80-204ENST00000575515 RALBP1Q15311 655 aa13.23□□□□□ -0.29
NDC80-204ENST00000575515 HHIPL1Q96JK4 782 aa13.23□□□□□ -0.29
NDC80-204ENST00000575515 GLIS2Q9BZE0 524 aaPredicted RBP13.23□□□□□ -0.29
NDC80-204ENST00000575515 MRS2Q9HD23 443 aa13.23□□□□□ -0.29
NDC80-204ENST00000575515 POLR2AP24928 1970 aaKnown RBP13.23□□□□□ -0.29
NDC80-204ENST00000575515 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
NDC80-204ENST00000575515 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
NDC80-204ENST00000575515 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
NDC80-204ENST00000575515 NOGQ13253 232 aa13.22□□□□□ -0.29
NDC80-204ENST00000575515 GPRC5DQ9NZD1 345 aa13.22□□□□□ -0.29
NDC80-204ENST00000575515 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
NDC80-204ENST00000575515 GRIPAP1Q4V328 841 aa13.21□□□□□ -0.29
NDC80-204ENST00000575515 PRPF38BQ5VTL8 546 aaKnown RBP13.21□□□□□ -0.29
NDC80-204ENST00000575515 NUTM1Q86Y26 1132 aa13.21□□□□□ -0.29
NDC80-204ENST00000575515 NYXQ9GZU5 481 aa13.21□□□□□ -0.29
NDC80-204ENST00000575515 CEMIPQ8WUJ3 1361 aa13.2□□□□□ -0.3
NDC80-204ENST00000575515 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
NDC80-204ENST00000575515 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
NDC80-204ENST00000575515 HLFQ16534 295 aa13.2□□□□□ -0.3
NDC80-204ENST00000575515 AOC3Q16853 763 aa13.2□□□□□ -0.3
NDC80-204ENST00000575515 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
NDC80-204ENST00000575515 NPC1L1Q9UHC9 1359 aa13.2□□□□□ -0.3
NDC80-204ENST00000575515 MYBBP1AQ9BQG0 1328 aaKnown RBP13.19□□□□□ -0.3
NDC80-204ENST00000575515 RGL2O15211 777 aa13.19□□□□□ -0.3
NDC80-204ENST00000575515 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
NDC80-204ENST00000575515 ZIC5Q96T25 663 aa13.19□□□□□ -0.3
NDC80-204ENST00000575515 BCL2L13Q9BXK5 485 aa13.19□□□□□ -0.3
NDC80-204ENST00000575515 RIC1Q4ADV7 1423 aa13.19□□□□□ -0.3
NDC80-204ENST00000575515 COL3A1P02461 1466 aaPredicted RBP13.18□□□□□ -0.3
NDC80-204ENST00000575515 LAMB2P55268 1798 aa13.18□□□□□ -0.3
NDC80-204ENST00000575515 NBPF26B4DH59 902 aa13.18□□□□□ -0.3
NDC80-204ENST00000575515 GMPSP49915 693 aaPredicted RBP13.18□□□□□ -0.3
NDC80-204ENST00000575515 HUNKP57058 714 aa13.18□□□□□ -0.3
NDC80-204ENST00000575515 NBPF10Q6P3W6 841 aaKnown RBP13.18□□□□□ -0.3
NDC80-204ENST00000575515 SLC51AQ86UW1 340 aa13.18□□□□□ -0.3
NDC80-204ENST00000575515 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
NDC80-204ENST00000575515 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
NDC80-204ENST00000575515 PER1O15534 1290 aaPredicted RBP13.17□□□□□ -0.3
NDC80-204ENST00000575515 HOXA10P31260 410 aaPredicted RBP13.17□□□□□ -0.3
NDC80-204ENST00000575515 CXCL9Q07325 125 aa13.17□□□□□ -0.3
NDC80-204ENST00000575515 CC2D1BQ5T0F9 858 aaKnown RBP13.17□□□□□ -0.3
NDC80-204ENST00000575515 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
NDC80-204ENST00000575515 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
NDC80-204ENST00000575515 ZNRF3Q9ULT6 936 aa13.17□□□□□ -0.3
NDC80-204ENST00000575515 CDHR2Q9BYE9 1310 aa13.16□□□□□ -0.3
NDC80-204ENST00000575515 CCDC184Q52MB2 194 aa13.16□□□□□ -0.3
NDC80-204ENST00000575515 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
NDC80-204ENST00000575515 CRAMP1Q96RY5 1269 aa13.16□□□□□ -0.3
NDC80-204ENST00000575515 GPTP24298 496 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 SUPT20HQ8NEM7 779 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 RTF1Q92541 710 aaKnown RBP13.15□□□□□ -0.3
NDC80-204ENST00000575515 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
NDC80-204ENST00000575515 ANKRD36CQ5JPF3 1778 aa13.15□□□□□ -0.31
NDC80-204ENST00000575515 TAF1P21675 1872 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 TRPA1O75762 1119 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 RAD17O75943 681 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 PRKAR2BP31323 418 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 HIRAP54198 1017 aaPredicted RBP13.14□□□□□ -0.31
NDC80-204ENST00000575515 TNIP1Q15025 636 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 RGMBQ6NW40 437 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 MCM10Q7L590 875 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 USP48Q86UV5 1035 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
NDC80-204ENST00000575515 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms