RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 ANKIB1Q9P2G1 1089 aa12.3□□□□□ -0.44
CALCOCO2-226ENST00000575461 INPP5FQ9Y2H2 1132 aa12.3□□□□□ -0.44
CALCOCO2-226ENST00000575461 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
CALCOCO2-226ENST00000575461 A6NHS1 94 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 TATP17735 454 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 RNF144AP50876 292 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 C4orf17Q53FE4 359 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 SNX29Q8TEQ0 813 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 SUSD3Q96L08 255 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 ZFAND3Q9H8U3 227 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 USP31Q70CQ4 1352 aa12.29□□□□□ -0.44
CALCOCO2-226ENST00000575461 TNFRSF21O75509 655 aa12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 ARID5AQ03989 594 aa12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 PDE12Q6L8Q7 609 aaKnown RBP12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 USP48Q86UV5 1035 aa12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 CCDC74AQ96AQ1 378 aa12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO2-226ENST00000575461 TNNI2P48788 182 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 IDH3AP50213 366 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 ARSDP51689 593 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 NOP9Q86U38 636 aaKnown RBP12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 AIDAQ96BJ3 306 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 SRCIN1Q9C0H9 1055 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 FAM8A1Q9UBU6 413 aa12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 DMGDHQ9UI17 866 aaKnown RBP12.27□□□□□ -0.45
CALCOCO2-226ENST00000575461 TIMP2P16035 220 aa12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 DNAJA1P31689 397 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 GTF2F1P35269 517 aaKnown RBP eCLIP12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZNF697Q5TEC3 545 aa12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 VPS37DQ86XT2 251 aa12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
CALCOCO2-226ENST00000575461 SPATA31C2B4DYI2 1134 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 ST13P50502 369 aaKnown RBP12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 TAF1CQ15572 869 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZNF394Q53GI3 561 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZNF438Q7Z4V0 828 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZNF598Q86UK7 904 aaKnown RBP12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZFYVE28Q9HCC9 887 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 GGT7Q9UJ14 662 aa12.25□□□□□ -0.45
CALCOCO2-226ENST00000575461 RACK1P63244 317 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 SOGA3Q5TF21 947 aa12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 MEIOBQ8N635 442 aa12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 OSBPL7Q9BZF2 842 aa12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 FOXD3Q9UJU5 478 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO2-226ENST00000575461 INPP5BP32019 993 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 FOXC1Q12948 553 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 USPL1Q5W0Q7 1092 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 EPS8L3Q8TE67 593 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 RNF166Q96A37 237 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 TSEN34Q9BSV6 310 aaKnown RBP12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 NEUROD4Q9HD90 331 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 PKD2L1Q9P0L9 805 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 PCDHGB7Q9Y5F8 929 aa12.23□□□□□ -0.45
CALCOCO2-226ENST00000575461 UBAP1LF5GYI3 381 aa12.22□□□□□ -0.45
CALCOCO2-226ENST00000575461 PHACTR2O75167 634 aa12.22□□□□□ -0.45
CALCOCO2-226ENST00000575461 BICDL1Q6ZP65 573 aa12.22□□□□□ -0.45
CALCOCO2-226ENST00000575461 ZNF280CQ8ND82 737 aa12.22□□□□□ -0.45
CALCOCO2-226ENST00000575461 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
CALCOCO2-226ENST00000575461 RBL2Q08999 1139 aa12.21□□□□□ -0.45
CALCOCO2-226ENST00000575461 GIMAP6Q6P9H5 292 aa12.21□□□□□ -0.45
CALCOCO2-226ENST00000575461 PI16Q6UXB8 463 aa12.21□□□□□ -0.45
CALCOCO2-226ENST00000575461 HSH2DQ96JZ2 352 aa12.21□□□□□ -0.45
CALCOCO2-226ENST00000575461 ELP3Q9H9T3 547 aa12.21□□□□□ -0.45
CALCOCO2-226ENST00000575461 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-226ENST00000575461 WDR44Q5JSH3 913 aa12.2□□□□□ -0.46
CALCOCO2-226ENST00000575461 BTLAQ7Z6A9 289 aa12.2□□□□□ -0.46
CALCOCO2-226ENST00000575461 CMTR1Q8N1G2 835 aaKnown RBP12.2□□□□□ -0.46
CALCOCO2-226ENST00000575461 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
CALCOCO2-226ENST00000575461 SPINT1O43278 529 aa12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 USP17L7P0C7H9 530 aa12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 EPB42P16452 691 aa12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 NCLP19338 710 aaKnown RBP12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 IRS1P35568 1242 aa12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 INSM2Q96T92 566 aaPredicted RBP12.19□□□□□ -0.46
CALCOCO2-226ENST00000575461 J3QL48 77 aa12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 PHKA2P46019 1235 aa12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 TRIP4Q15650 581 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 IFFO2Q5TF58 517 aa12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 CYP4X1Q8N118 509 aa12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 POLMQ9NP87 494 aaPredicted RBP12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 KCNMB2Q9Y691 235 aa12.18□□□□□ -0.46
CALCOCO2-226ENST00000575461 GJA8P48165 433 aa12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 MEI1Q5TIA1 1274 aa12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 GALNT12Q8IXK2 581 aa12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 PMEPA1Q969W9 287 aa12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 C11orf16Q9NQ32 467 aa12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 TMA7Q9Y2S6 64 aaKnown RBP12.17□□□□□ -0.46
CALCOCO2-226ENST00000575461 POTECB2RU33 542 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 CCDC144BQ3MJ40 725 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 ERMP1Q7Z2K6 904 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 BCO2Q9BYV7 579 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 NPHS2Q9NP85 383 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 USP20Q9Y2K6 914 aa12.16□□□□□ -0.46
CALCOCO2-226ENST00000575461 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO2-226ENST00000575461 UPP2O95045 317 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms