RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 KLRG2A4D1S0 409 aaPredicted RBP26.59■■□□□ 1.85
HCFC1R1-208ENST00000575214 ATP5J2-PTCD1G3V325 749 aa26.58■■□□□ 1.85
HCFC1R1-208ENST00000575214 SLC4A2P04920 1241 aa26.58■■□□□ 1.85
HCFC1R1-208ENST00000575214 NPR1P16066 1061 aa26.58■■□□□ 1.85
HCFC1R1-208ENST00000575214 E9PSI1 815 aa26.58■■□□□ 1.84
HCFC1R1-208ENST00000575214 ZNF428Q96B54 188 aa26.58■■□□□ 1.84
HCFC1R1-208ENST00000575214 ISCA1Q9BUE6 129 aa26.58■■□□□ 1.84
HCFC1R1-208ENST00000575214 ZNF219Q9P2Y4 722 aaPredicted RBP26.58■■□□□ 1.84
HCFC1R1-208ENST00000575214 TRMT112Q9UI30 125 aaKnown RBP26.58■■□□□ 1.84
HCFC1R1-208ENST00000575214 RNF123Q5XPI4 1314 aa26.57■■□□□ 1.84
HCFC1R1-208ENST00000575214 RIC1Q4ADV7 1423 aa26.57■■□□□ 1.84
HCFC1R1-208ENST00000575214 TNRC6CQ9HCJ0 1690 aaKnown RBP26.56■■□□□ 1.84
HCFC1R1-208ENST00000575214 PRPF40BQ6NWY9 871 aaKnown RBP26.56■■□□□ 1.84
HCFC1R1-208ENST00000575214 ARFGEF2Q9Y6D5 1785 aa26.56■■□□□ 1.84
HCFC1R1-208ENST00000575214 MYD88Q99836 296 aa26.55■■□□□ 1.84
HCFC1R1-208ENST00000575214 SH3TC1Q8TE82 1336 aa26.55■■□□□ 1.84
HCFC1R1-208ENST00000575214 C21orf2O43822 256 aa26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 CRY2Q49AN0 593 aa26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 G2E3Q7L622 706 aa26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 ZNF784Q8NCA9 323 aaPredicted RBP26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 RPGRQ92834 1020 aaKnown RBP26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 MAP3K2Q9Y2U5 619 aa26.54■■□□□ 1.84
HCFC1R1-208ENST00000575214 KSR2Q6VAB6 950 aa26.53■■□□□ 1.84
HCFC1R1-208ENST00000575214 NLRP3Q96P20 1036 aa26.53■■□□□ 1.84
HCFC1R1-208ENST00000575214 PI4KAP2A4QPH2 592 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 SLFN5Q08AF3 891 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 FLIIQ13045 1269 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 TRIM28Q13263 835 aaKnown RBP26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 SLC10A5Q5PT55 438 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 SYNE4Q8N205 404 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 PI4KAP1Q8N8J0 262 aa26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 METTL22Q9BUU2 404 aaPredicted RBP26.52■■□□□ 1.84
HCFC1R1-208ENST00000575214 HCLS1P14317 486 aaPredicted RBP26.51■■□□□ 1.83
HCFC1R1-208ENST00000575214 ALDH1B1P30837 517 aa26.51■■□□□ 1.83
HCFC1R1-208ENST00000575214 C3orf67Q6ZVT6 689 aa26.51■■□□□ 1.83
HCFC1R1-208ENST00000575214 CDCA7LQ96GN5 454 aa26.51■■□□□ 1.83
HCFC1R1-208ENST00000575214 RASSF7Q02833 373 aa26.5■■□□□ 1.83
HCFC1R1-208ENST00000575214 FKBP5Q13451 457 aaPredicted RBP26.5■■□□□ 1.83
HCFC1R1-208ENST00000575214 ADCY9O60503 1353 aa26.5■■□□□ 1.83
HCFC1R1-208ENST00000575214 FAM89AQ96GI7 184 aa26.49■■□□□ 1.83
HCFC1R1-208ENST00000575214 RTL5Q5HYW3 569 aaPredicted RBP26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 SOGA3Q5TF21 947 aa26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 C9orf131Q5VYM1 1079 aa26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 SLX4Q8IY92 1834 aa26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 CCDC191Q8NCU4 936 aa26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 RBM17Q96I25 401 aaKnown RBP26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 CACNA1SQ13698 1873 aa26.48■■□□□ 1.83
HCFC1R1-208ENST00000575214 HOXA10P31260 410 aaPredicted RBP26.47■■□□□ 1.83
HCFC1R1-208ENST00000575214 NEXNQ0ZGT2 675 aa26.47■■□□□ 1.83
HCFC1R1-208ENST00000575214 CWC25Q9NXE8 425 aaPredicted RBP26.47■■□□□ 1.83
HCFC1R1-208ENST00000575214 RNF181Q9P0P0 153 aa26.47■■□□□ 1.83
HCFC1R1-208ENST00000575214 NFKBIEO00221 500 aa26.46■■□□□ 1.83
HCFC1R1-208ENST00000575214 ZBTB38Q8NAP3 1195 aaPredicted RBP26.46■■□□□ 1.83
HCFC1R1-208ENST00000575214 CCDC93Q567U6 631 aa26.45■■□□□ 1.82
HCFC1R1-208ENST00000575214 C7orf43Q8WVR3 580 aa26.45■■□□□ 1.82
HCFC1R1-208ENST00000575214 CRAMP1Q96RY5 1269 aa26.45■■□□□ 1.82
HCFC1R1-208ENST00000575214 IRS4O14654 1257 aaPredicted RBP26.44■■□□□ 1.82
HCFC1R1-208ENST00000575214 IGKV5-2P06315 115 aa26.43■■□□□ 1.82
HCFC1R1-208ENST00000575214 LMNB1P20700 586 aa26.43■■□□□ 1.82
HCFC1R1-208ENST00000575214 HNRNPUQ00839 825 aaKnown RBP eCLIP26.43■■□□□ 1.82
HCFC1R1-208ENST00000575214 DNAAF4Q8WXU2 420 aa26.43■■□□□ 1.82
HCFC1R1-208ENST00000575214 TAOK3Q9H2K8 898 aa26.43■■□□□ 1.82
HCFC1R1-208ENST00000575214 PCCAP05165 728 aaPredicted RBP26.42■■□□□ 1.82
HCFC1R1-208ENST00000575214 OLFM4Q6UX06 510 aa26.42■■□□□ 1.82
HCFC1R1-208ENST00000575214 TRMT2AQ8IZ69 625 aaKnown RBP26.42■■□□□ 1.82
HCFC1R1-208ENST00000575214 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
HCFC1R1-208ENST00000575214 CACNA1FO60840 1977 aa26.41■■□□□ 1.82
HCFC1R1-208ENST00000575214 PPEF1O14829 653 aaPredicted RBP26.41■■□□□ 1.82
HCFC1R1-208ENST00000575214 CWF19L2Q2TBE0 894 aaKnown RBP26.41■■□□□ 1.82
HCFC1R1-208ENST00000575214 DDX46Q7L014 1031 aaKnown RBP26.41■■□□□ 1.82
HCFC1R1-208ENST00000575214 ABCC4O15439 1325 aa26.4■■□□□ 1.82
HCFC1R1-208ENST00000575214 NEURL1BA8MQ27 555 aa26.4■■□□□ 1.82
HCFC1R1-208ENST00000575214 HSP90B1P14625 803 aaKnown RBP26.4■■□□□ 1.82
HCFC1R1-208ENST00000575214 PRELPP51888 382 aa26.4■■□□□ 1.82
HCFC1R1-208ENST00000575214 JARID2Q92833 1246 aaPredicted RBP26.4■■□□□ 1.82
HCFC1R1-208ENST00000575214 LTBP3Q9NS15 1303 aa26.39■■□□□ 1.82
HCFC1R1-208ENST00000575214 DDX60Q8IY21 1712 aaKnown RBP26.39■■□□□ 1.81
HCFC1R1-208ENST00000575214 F6X3S4 739 aa26.38■■□□□ 1.81
HCFC1R1-208ENST00000575214 RTKN2Q8IZC4 609 aa26.38■■□□□ 1.81
HCFC1R1-208ENST00000575214 LAMB2P55268 1798 aa26.38■■□□□ 1.81
HCFC1R1-208ENST00000575214 FER1L6Q2WGJ9 1857 aa26.38■■□□□ 1.81
HCFC1R1-208ENST00000575214 SF3B3Q15393 1217 aaKnown RBP26.37■■□□□ 1.81
HCFC1R1-208ENST00000575214 CC2D2BQ6DHV5 1058 aa26.37■■□□□ 1.81
HCFC1R1-208ENST00000575214 GPBP1L1Q9HC44 474 aaPredicted RBP26.37■■□□□ 1.81
HCFC1R1-208ENST00000575214 FKBP4Q02790 459 aaKnown RBP eCLIP26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 GRAPQ13588 217 aa26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 MRPL50Q8N5N7 158 aaKnown RBP26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 LINS1Q8NG48 757 aa26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 GRAPLQ8TC17 118 aaPredicted RBP26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 TMX4Q9H1E5 349 aaPredicted RBP26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 SBF1O95248 1867 aa26.36■■□□□ 1.81
HCFC1R1-208ENST00000575214 SSH1Q8WYL5 1049 aa26.35■■□□□ 1.81
HCFC1R1-208ENST00000575214 BCL2L13Q9BXK5 485 aa26.35■■□□□ 1.81
HCFC1R1-208ENST00000575214 CDHR2Q9BYE9 1310 aa26.35■■□□□ 1.81
HCFC1R1-208ENST00000575214 PDE8AO60658 829 aa26.34■■□□□ 1.81
HCFC1R1-208ENST00000575214 BBOX1O75936 387 aa26.34■■□□□ 1.81
HCFC1R1-208ENST00000575214 GCKRQ14397 625 aa26.34■■□□□ 1.81
HCFC1R1-208ENST00000575214 CT47B1P0C2W7 299 aaPredicted RBP26.33■■□□□ 1.81
HCFC1R1-208ENST00000575214 SLC51AQ86UW1 340 aa26.33■■□□□ 1.81
HCFC1R1-208ENST00000575214 ZC3H4Q9UPT8 1303 aaKnown RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 181.3 ms