RNA–Protein interactions for RNA: ENST00000575049.1

TSR1-203, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 3

Gene TSR1, Length 387 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-203ENST00000575049 BCS1LQ9Y276 419 aa7.39□□□□□ -1.23
TSR1-203ENST00000575049 B4GALNT3Q6L9W6 998 aa7.38□□□□□ -1.23
TSR1-203ENST00000575049 BTLAQ7Z6A9 289 aa7.38□□□□□ -1.23
TSR1-203ENST00000575049 CEP63Q96MT8 703 aa7.38□□□□□ -1.23
TSR1-203ENST00000575049 SEPT3Q9UH03 358 aa7.38□□□□□ -1.23
TSR1-203ENST00000575049 SRSF11Q05519 484 aaKnown RBP7.37□□□□□ -1.23
TSR1-203ENST00000575049 TYRO3Q06418 890 aa7.37□□□□□ -1.23
TSR1-203ENST00000575049 IGF1RP08069 1367 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 PPM1GO15355 546 aaPredicted RBP7.36□□□□□ -1.23
TSR1-203ENST00000575049 CD33P20138 364 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 CTBSQ01459 385 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 IFT43Q96FT9 208 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 BRD7Q9NPI1 651 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 STRN4Q9NRL3 753 aa7.36□□□□□ -1.23
TSR1-203ENST00000575049 DMGDHQ9UI17 866 aaKnown RBP7.36□□□□□ -1.23
TSR1-203ENST00000575049 NSFL1CQ9UNZ2 370 aaKnown RBP7.36□□□□□ -1.23
TSR1-203ENST00000575049 TNFRSF10BO14763 440 aa7.35□□□□□ -1.23
TSR1-203ENST00000575049 ADAMTS2O95450 1211 aa7.35□□□□□ -1.23
TSR1-203ENST00000575049 BMP4P12644 408 aa7.35□□□□□ -1.23
TSR1-203ENST00000575049 CANXP27824 592 aaKnown RBP7.35□□□□□ -1.23
TSR1-203ENST00000575049 SFSWAPQ12872 951 aaKnown RBP7.35□□□□□ -1.23
TSR1-203ENST00000575049 FAM182BQ5T319 152 aa7.35□□□□□ -1.23
TSR1-203ENST00000575049 MARK1Q9P0L2 795 aa7.35□□□□□ -1.23
TSR1-203ENST00000575049 C2CD2LO14523 706 aa7.34□□□□□ -1.23
TSR1-203ENST00000575049 MICAL2O94851 1124 aa7.34□□□□□ -1.23
TSR1-203ENST00000575049 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
TSR1-203ENST00000575049 BRD2P25440 801 aaKnown RBP7.34□□□□□ -1.23
TSR1-203ENST00000575049 MAP2K3P46734 347 aa7.34□□□□□ -1.23
TSR1-203ENST00000575049 IDH3AP50213 366 aa7.34□□□□□ -1.23
TSR1-203ENST00000575049 ERCC3P19447 782 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 INPP5BP32019 993 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 KCNQ4P56696 695 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 INSM1Q01101 510 aaPredicted RBP7.33□□□□□ -1.24
TSR1-203ENST00000575049 DNAJC14Q6Y2X3 702 aaPredicted RBP7.33□□□□□ -1.24
TSR1-203ENST00000575049 TREML1Q86YW5 311 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 ETFBKMTQ8IXQ9 262 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 HELQQ8TDG4 1101 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 GTF3C2Q8WUA4 911 aaPredicted RBP7.33□□□□□ -1.24
TSR1-203ENST00000575049 DRC1Q96MC2 740 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 STIM2Q9P246 746 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 KCNH4Q9UQ05 1017 aa7.33□□□□□ -1.24
TSR1-203ENST00000575049 ZNF16P17020 682 aaPredicted RBP7.32□□□□□ -1.24
TSR1-203ENST00000575049 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
TSR1-203ENST00000575049 ARSDP51689 593 aa7.32□□□□□ -1.24
TSR1-203ENST00000575049 GRIN2CQ14957 1233 aa7.32□□□□□ -1.24
TSR1-203ENST00000575049 FAM26DQ5JW98 314 aa7.32□□□□□ -1.24
TSR1-203ENST00000575049 DNMT3AQ9Y6K1 912 aaPredicted RBP7.32□□□□□ -1.24
TSR1-203ENST00000575049 TCF3P15923 654 aa7.31□□□□□ -1.24
TSR1-203ENST00000575049 EPB42P16452 691 aa7.31□□□□□ -1.24
TSR1-203ENST00000575049 ARID4AP29374 1257 aaPredicted RBP7.31□□□□□ -1.24
TSR1-203ENST00000575049 ZSCAN1Q8NBB4 408 aa7.31□□□□□ -1.24
TSR1-203ENST00000575049 OXCT2Q9BYC2 517 aaPredicted RBP7.31□□□□□ -1.24
TSR1-203ENST00000575049 OPLAHO14841 1288 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 SMARCA5O60264 1052 aaPredicted RBP7.3□□□□□ -1.24
TSR1-203ENST00000575049 GRNP28799 593 aaKnown RBP7.3□□□□□ -1.24
TSR1-203ENST00000575049 SPEM2Q0P670 501 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 MTMR3Q13615 1198 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 NOM1Q5C9Z4 860 aaKnown RBP7.3□□□□□ -1.24
TSR1-203ENST00000575049 ABTB2Q8N961 1025 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 WHAMMQ8TF30 809 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 ACDQ96AP0 544 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 SLC30A3Q99726 388 aa7.3□□□□□ -1.24
TSR1-203ENST00000575049 ABL1P00519 1130 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 ARAFP10398 606 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 SERPINB4P48594 390 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 ZNF211Q13398 564 aaPredicted RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 ZNF385CQ66K41 422 aaPredicted RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 LYPD4Q6UWN0 246 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 CCER1Q8TC90 406 aaPredicted RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 SREK1Q8WXA9 508 aaKnown RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 C8orf37Q96NL8 207 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 AVENQ9NQS1 362 aaPredicted RBP7.29□□□□□ -1.24
TSR1-203ENST00000575049 PRR12Q9ULL5 1215 aa7.29□□□□□ -1.24
TSR1-203ENST00000575049 ZBTB39O15060 712 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 CELA2BP08218 269 aaPredicted RBP7.28□□□□□ -1.24
TSR1-203ENST00000575049 MPSTP25325 297 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 ZAP70P43403 619 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 RAB44Q7Z6P3 723 aaPredicted RBP7.28□□□□□ -1.24
TSR1-203ENST00000575049 RGL4Q8IZJ4 473 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 SVOPQ8N4V2 548 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 GOLGA6L1Q8N7Z2 621 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 ANO2Q9NQ90 1003 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 GGA1Q9UJY5 639 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 GDF2Q9UK05 429 aaPredicted RBP7.28□□□□□ -1.24
TSR1-203ENST00000575049 USP20Q9Y2K6 914 aa7.28□□□□□ -1.24
TSR1-203ENST00000575049 RTCBQ9Y3I0 505 aaKnown RBP7.28□□□□□ -1.24
TSR1-203ENST00000575049 BCRP11274 1271 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 PCBP4P57723 403 aaKnown RBP7.27□□□□□ -1.25
TSR1-203ENST00000575049 FKBP4Q02790 459 aaKnown RBP eCLIP7.27□□□□□ -1.25
TSR1-203ENST00000575049 SF3B2Q13435 895 aaKnown RBP7.27□□□□□ -1.25
TSR1-203ENST00000575049 SLCO4C1Q6ZQN7 724 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 POLR3GLQ9BT43 218 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 BCL2L13Q9BXK5 485 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 FAM13BQ9NYF5 915 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 EGFL7Q9UHF1 273 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 KLF15Q9UIH9 416 aa7.27□□□□□ -1.25
TSR1-203ENST00000575049 CADPSQ9ULU8 1353 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms