RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
NPLOC4-216ENST00000574344 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
NPLOC4-216ENST00000574344 DDX21Q9NR30 783 aaKnown RBP eCLIP12.55□□□□□ -0.4
NPLOC4-216ENST00000574344 CHPF2Q9P2E5 772 aa12.55□□□□□ -0.4
NPLOC4-216ENST00000574344 TAF1P21675 1872 aa12.55□□□□□ -0.4
NPLOC4-216ENST00000574344 DDX60Q8IY21 1712 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 VEGFAP15692 232 aaPredicted RBP12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 FKBP4Q02790 459 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 CALD1Q05682 793 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 OLFM4Q6UX06 510 aa12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 LRP10Q7Z4F1 713 aa12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 MBIPQ9NS73 344 aa12.54□□□□□ -0.4
NPLOC4-216ENST00000574344 HOXB7P09629 217 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 GNAI1P63096 354 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 FSTL1Q12841 308 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 RTKN2Q8IZC4 609 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 SMC1BQ8NDV3 1235 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 RBM17Q96I25 401 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 ZNF277Q9NRM2 450 aaPredicted RBP12.53□□□□□ -0.4
NPLOC4-216ENST00000574344 TCERG1O14776 1098 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 ANP32CO43423 234 aa12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 C7orf43Q8WVR3 580 aa12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 YTHDC1Q96MU7 727 aaKnown RBP12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 IFT57Q9NWB7 429 aa12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 DBF4Q9UBU7 674 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-216ENST00000574344 PPEF1O14829 653 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 TMX4Q9H1E5 349 aaPredicted RBP12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 TRMT112Q9UI30 125 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 RNF123Q5XPI4 1314 aa12.51□□□□□ -0.41
NPLOC4-216ENST00000574344 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 IARSP41252 1262 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 TCIRG1Q13488 830 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 NLRP10Q86W26 655 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 SYNE4Q8N205 404 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 HYPKQ9NX55 129 aa12.5□□□□□ -0.41
NPLOC4-216ENST00000574344 SH3TC1Q8TE82 1336 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 ZNF853P0CG23 659 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 HCLS1P14317 486 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 HOXA10P31260 410 aaPredicted RBP12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 ANKRD13DQ6ZTN6 518 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 PLBD2Q8NHP8 589 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 JDP2Q8WYK2 163 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 CRAMP1Q96RY5 1269 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 MYH3P11055 1940 aa12.49□□□□□ -0.41
NPLOC4-216ENST00000574344 ABCC4O15439 1325 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 ZNF541Q9H0D2 1346 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 IQCA1LA6NCM1 817 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 HTRA3P83110 453 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 GOLGA2Q08379 1002 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 RIC3Q7Z5B4 369 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 PSMD1Q99460 953 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 CACNA1FO60840 1977 aa12.48□□□□□ -0.41
NPLOC4-216ENST00000574344 SNED1Q8TER0 1413 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 SPEF2Q9C093 1822 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 POTECB2RU33 542 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 DDX46Q7L014 1031 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
NPLOC4-216ENST00000574344 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 SLC10A5Q5PT55 438 aa12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 SLC51AQ86UW1 340 aa12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 TSR2Q969E8 191 aaKnown RBP12.46□□□□□ -0.41
NPLOC4-216ENST00000574344 COL4A5P29400 1685 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 PPIP5K2O43314 1243 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 CCDC30Q5VVM6 783 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 FAM89AQ96GI7 184 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 ATP6V0A2Q9Y487 856 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 GJA3Q9Y6H8 435 aa12.45□□□□□ -0.42
NPLOC4-216ENST00000574344 CCER2I3L3R5 266 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 POTEIP0CG38 1075 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 POTEJP0CG39 1038 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 GRAPQ13588 217 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 DPP8Q6V1X1 898 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 SUPT20HQ8NEM7 779 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 GRAPLQ8TC17 118 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 L3MBTL3Q96JM7 780 aaPredicted RBP12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 MYD88Q99836 296 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 STK31Q9BXU1 1019 aa12.44□□□□□ -0.42
NPLOC4-216ENST00000574344 HACL1Q9UJ83 578 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms