RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 SENP3-EIF4A1A0A087X0R7 540 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 PDE6BP35913 854 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 C1QTNF8P60827 252 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 PROSER3Q2NL68 480 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 ARFGEF1Q9Y6D6 1849 aa13.06□□□□□ -0.32
RPA1-206ENST00000573994 APAF1O14727 1248 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 RGL2O15211 777 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 GPTP24298 496 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 RNF181Q9P0P0 153 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 ABCC12Q96J65 1359 aa13.05□□□□□ -0.32
RPA1-206ENST00000573994 CHL1O00533 1208 aa13.04□□□□□ -0.32
RPA1-206ENST00000573994 PDIA6Q15084 440 aa13.04□□□□□ -0.32
RPA1-206ENST00000573994 MAMSTRQ6ZN01 415 aa13.04□□□□□ -0.32
RPA1-206ENST00000573994 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
RPA1-206ENST00000573994 C21orf2O43822 256 aa13.03□□□□□ -0.32
RPA1-206ENST00000573994 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
RPA1-206ENST00000573994 NUTM1Q86Y26 1132 aa13.03□□□□□ -0.32
RPA1-206ENST00000573994 PDZRN3Q9UPQ7 1066 aa13.03□□□□□ -0.32
RPA1-206ENST00000573994 UBN2Q6ZU65 1347 aa13.03□□□□□ -0.32
RPA1-206ENST00000573994 TTLL13PA6NNM8 815 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 ERVV-1B6SEH8 477 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 NFKBIEO00221 500 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 SRGNP10124 158 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 PRELPP51888 382 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 MBIPQ9NS73 344 aa13.02□□□□□ -0.33
RPA1-206ENST00000573994 TNRC6CQ9HCJ0 1690 aaKnown RBP13.02□□□□□ -0.33
RPA1-206ENST00000573994 GTF2E1P29083 439 aaPredicted RBP13.01□□□□□ -0.33
RPA1-206ENST00000573994 AIMP1Q12904 312 aaKnown RBP13.01□□□□□ -0.33
RPA1-206ENST00000573994 STYK1Q6J9G0 422 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 PRPF40BQ6NWY9 871 aaKnown RBP13.01□□□□□ -0.33
RPA1-206ENST00000573994 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 XAGE3Q8WTP9 111 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 SPOCK2Q92563 424 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 CHPF2Q9P2E5 772 aa13.01□□□□□ -0.33
RPA1-206ENST00000573994 KIF3CO14782 793 aa13□□□□□ -0.33
RPA1-206ENST00000573994 ANP32CO43423 234 aa13□□□□□ -0.33
RPA1-206ENST00000573994 PYGBP11216 843 aa13□□□□□ -0.33
RPA1-206ENST00000573994 ERFEQ4G0M1 354 aa13□□□□□ -0.33
RPA1-206ENST00000573994 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
RPA1-206ENST00000573994 CNKSR1Q969H4 720 aa13□□□□□ -0.33
RPA1-206ENST00000573994 CFAP44Q96MT7 982 aa13□□□□□ -0.33
RPA1-206ENST00000573994 MRS2Q9HD23 443 aa13□□□□□ -0.33
RPA1-206ENST00000573994 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
RPA1-206ENST00000573994 TRPC6Q9Y210 931 aa13□□□□□ -0.33
RPA1-206ENST00000573994 LMNB1P20700 586 aa12.99□□□□□ -0.33
RPA1-206ENST00000573994 IER5LQ5T953 404 aa12.99□□□□□ -0.33
RPA1-206ENST00000573994 SUSD4Q5VX71 490 aa12.99□□□□□ -0.33
RPA1-206ENST00000573994 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
RPA1-206ENST00000573994 COPS6Q7L5N1 327 aa12.99□□□□□ -0.33
RPA1-206ENST00000573994 NYXQ9GZU5 481 aa12.99□□□□□ -0.33
RPA1-206ENST00000573994 IBTKQ9P2D0 1353 aaPredicted RBP12.98□□□□□ -0.33
RPA1-206ENST00000573994 SEC24BO95487 1268 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 NTSR2O95665 410 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 ZNF853P0CG23 659 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 NPR1P16066 1061 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 DUSP27Q5VZP5 1158 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 ZNF34Q8IZ26 560 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 ZNF428Q96B54 188 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 DDX21Q9NR30 783 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPA1-206ENST00000573994 IFT57Q9NWB7 429 aa12.98□□□□□ -0.33
RPA1-206ENST00000573994 CEP350Q5VT06 3117 aa12.97□□□□□ -0.33
RPA1-206ENST00000573994 KLRG2A4D1S0 409 aaPredicted RBP12.97□□□□□ -0.33
RPA1-206ENST00000573994 HOXB7P09629 217 aa12.97□□□□□ -0.33
RPA1-206ENST00000573994 C3orf67Q6ZVT6 689 aa12.97□□□□□ -0.33
RPA1-206ENST00000573994 ZNF467Q7Z7K2 595 aaPredicted RBP12.97□□□□□ -0.33
RPA1-206ENST00000573994 TAOK3Q9H2K8 898 aa12.97□□□□□ -0.33
RPA1-206ENST00000573994 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.33
RPA1-206ENST00000573994 GNAI1P63096 354 aa12.96□□□□□ -0.33
RPA1-206ENST00000573994 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
RPA1-206ENST00000573994 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
RPA1-206ENST00000573994 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
RPA1-206ENST00000573994 SLX4Q8IY92 1834 aa12.96□□□□□ -0.33
RPA1-206ENST00000573994 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.34
RPA1-206ENST00000573994 NUP98P52948 1817 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 KDM2BQ8NHM5 1336 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 PARP10Q53GL7 1025 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 TSR2Q969E8 191 aaKnown RBP12.95□□□□□ -0.34
RPA1-206ENST00000573994 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
RPA1-206ENST00000573994 ARFGEF2Q9Y6D5 1785 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 ZC3H4Q9UPT8 1303 aaKnown RBP12.94□□□□□ -0.34
RPA1-206ENST00000573994 CRY2Q49AN0 593 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 NLRP10Q86W26 655 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 C8orf58Q8NAV2 365 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 C7orf43Q8WVR3 580 aa12.94□□□□□ -0.34
RPA1-206ENST00000573994 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
RPA1-206ENST00000573994 UTP14AQ9BVJ6 771 aaKnown RBP12.94□□□□□ -0.34
RPA1-206ENST00000573994 DBF4Q9UBU7 674 aaPredicted RBP12.94□□□□□ -0.34
RPA1-206ENST00000573994 LTBP3Q9NS15 1303 aa12.93□□□□□ -0.34
RPA1-206ENST00000573994 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms