RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 EPS15P42566 896 aa16.33■□□□□ 0.2
PRPF8-208ENST00000573716 LARGE2Q8N3Y3 721 aa16.33■□□□□ 0.2
PRPF8-208ENST00000573716 NGEFQ8N5V2 710 aa16.33■□□□□ 0.2
PRPF8-208ENST00000573716 CLSPNQ9HAW4 1339 aa16.33■□□□□ 0.2
PRPF8-208ENST00000573716 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 COL4A5P29400 1685 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 HLFQ16534 295 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
PRPF8-208ENST00000573716 MCM10Q7L590 875 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 NUTM1Q86Y26 1132 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 RTF1Q92541 710 aaKnown RBP16.32■□□□□ 0.2
PRPF8-208ENST00000573716 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
PRPF8-208ENST00000573716 PSMD1Q99460 953 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 THSD7BQ9C0I4 1608 aa16.32■□□□□ 0.2
PRPF8-208ENST00000573716 AOC2O75106 756 aa16.31■□□□□ 0.2
PRPF8-208ENST00000573716 ABCC12Q96J65 1359 aa16.3■□□□□ 0.2
PRPF8-208ENST00000573716 PER1O15534 1290 aaPredicted RBP16.29■□□□□ 0.2
PRPF8-208ENST00000573716 SCNN1DP51172 638 aa16.29■□□□□ 0.2
PRPF8-208ENST00000573716 CST9Q5W186 159 aa16.29■□□□□ 0.2
PRPF8-208ENST00000573716 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
PRPF8-208ENST00000573716 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
PRPF8-208ENST00000573716 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
PRPF8-208ENST00000573716 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 DCTN1Q14203 1278 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 USP50Q70EL3 339 aaPredicted RBP16.28■□□□□ 0.2
PRPF8-208ENST00000573716 SLC51AQ86UW1 340 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 CFAP53Q96M91 514 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 RSPH6AQ9H0K4 717 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 TLL2Q9Y6L7 1015 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 NUP98P52948 1817 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
PRPF8-208ENST00000573716 GPTP24298 496 aa16.27■□□□□ 0.2
PRPF8-208ENST00000573716 CRY2Q49AN0 593 aa16.27■□□□□ 0.2
PRPF8-208ENST00000573716 LAMB4A4D0S4 1761 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 PPEF1O14829 653 aaPredicted RBP16.26■□□□□ 0.19
PRPF8-208ENST00000573716 RGL2O15211 777 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 PPIP5K2O43314 1243 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 CELF2O95319 508 aaKnown RBP16.26■□□□□ 0.19
PRPF8-208ENST00000573716 RBM17Q96I25 401 aaKnown RBP16.26■□□□□ 0.19
PRPF8-208ENST00000573716 MCOLN1Q9GZU1 580 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 ZNF408Q9H9D4 720 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
PRPF8-208ENST00000573716 U2AF1L5P0DN76 240 aaPredicted RBP16.25■□□□□ 0.19
PRPF8-208ENST00000573716 MAP2K2P36507 400 aa16.25■□□□□ 0.19
PRPF8-208ENST00000573716 RGS19P49795 217 aa16.25■□□□□ 0.19
PRPF8-208ENST00000573716 U2AF1Q01081 240 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRPF8-208ENST00000573716 AOC3Q16853 763 aa16.25■□□□□ 0.19
PRPF8-208ENST00000573716 KIF6Q6ZMV9 814 aa16.25■□□□□ 0.19
PRPF8-208ENST00000573716 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
PRPF8-208ENST00000573716 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
PRPF8-208ENST00000573716 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
PRPF8-208ENST00000573716 ZBTB3Q9H5J0 574 aa16.24■□□□□ 0.19
PRPF8-208ENST00000573716 ADARB2Q9NS39 739 aaKnown RBP16.24■□□□□ 0.19
PRPF8-208ENST00000573716 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
PRPF8-208ENST00000573716 MYL6BP14649 208 aa16.23■□□□□ 0.19
PRPF8-208ENST00000573716 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
PRPF8-208ENST00000573716 DGKZQ13574 1117 aa16.23■□□□□ 0.19
PRPF8-208ENST00000573716 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
PRPF8-208ENST00000573716 TTLL7Q6ZT98 887 aa16.23■□□□□ 0.19
PRPF8-208ENST00000573716 GPRC5DQ9NZD1 345 aa16.23■□□□□ 0.19
PRPF8-208ENST00000573716 MAP3K15Q6ZN16 1313 aa16.22■□□□□ 0.19
PRPF8-208ENST00000573716 CA12O43570 354 aa16.22■□□□□ 0.19
PRPF8-208ENST00000573716 GMPSP49915 693 aaPredicted RBP16.22■□□□□ 0.19
PRPF8-208ENST00000573716 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
PRPF8-208ENST00000573716 SAPCD2Q86UD0 394 aa16.22■□□□□ 0.19
PRPF8-208ENST00000573716 CCER1Q8TC90 406 aaPredicted RBP16.22■□□□□ 0.19
PRPF8-208ENST00000573716 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
PRPF8-208ENST00000573716 NPC1L1Q9UHC9 1359 aa16.22■□□□□ 0.19
PRPF8-208ENST00000573716 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 ERVV-1B6SEH8 477 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 CIAPIN1Q6FI81 312 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 BCL2L13Q9BXK5 485 aa16.21■□□□□ 0.19
PRPF8-208ENST00000573716 RIC1Q4ADV7 1423 aa16.2■□□□□ 0.18
PRPF8-208ENST00000573716 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
PRPF8-208ENST00000573716 CXCL9Q07325 125 aa16.2■□□□□ 0.18
PRPF8-208ENST00000573716 ZNRF3Q9ULT6 936 aa16.2■□□□□ 0.18
PRPF8-208ENST00000573716 IBTKQ9P2D0 1353 aaPredicted RBP16.18■□□□□ 0.18
PRPF8-208ENST00000573716 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
PRPF8-208ENST00000573716 RAD17O75943 681 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 NTSR2O95665 410 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 SUPT20HQ8NEM7 779 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 NLRP3Q96P20 1036 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 PCDH10Q9P2E7 1040 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 ATP6V0A2Q9Y487 856 aa16.18■□□□□ 0.18
PRPF8-208ENST00000573716 DPP8Q6V1X1 898 aaPredicted RBP16.17■□□□□ 0.18
PRPF8-208ENST00000573716 KDM3BQ7LBC6 1761 aa16.17■□□□□ 0.18
PRPF8-208ENST00000573716 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 HUNKP57058 714 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 ZNF34Q8IZ26 560 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 HHIPL1Q96JK4 782 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 ZIC5Q96T25 663 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 ABCC4O15439 1325 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 PDE4DIPQ5VU43 2346 aa16.16■□□□□ 0.18
PRPF8-208ENST00000573716 NEFMP07197 916 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms