RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 PRR5LQ6MZQ0 368 aa18.38■□□□□ 0.53
NPLOC4-209ENST00000572760 ATF7IPQ6VMQ6 1270 aa18.38■□□□□ 0.53
NPLOC4-209ENST00000572760 SRCIN1Q9C0H9 1055 aa18.38■□□□□ 0.53
NPLOC4-209ENST00000572760 NEURL1BA8MQ27 555 aa18.37■□□□□ 0.53
NPLOC4-209ENST00000572760 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
NPLOC4-209ENST00000572760 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
NPLOC4-209ENST00000572760 CCDC24Q8N4L8 307 aa18.37■□□□□ 0.53
NPLOC4-209ENST00000572760 MS4A1P11836 297 aa18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 RTL5Q5HYW3 569 aaPredicted RBP18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 N4BP2Q86UW6 1770 aaPredicted RBP18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 SH3TC1Q8TE82 1336 aa18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 CLUAP1Q96AJ1 413 aa18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 IBTKQ9P2D0 1353 aaPredicted RBP18.36■□□□□ 0.53
NPLOC4-209ENST00000572760 KIF13BQ9NQT8 1826 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 PXDNLA1KZ92 1463 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 ALDH1L1O75891 902 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 NTSR2O95665 410 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 TRIM27P14373 513 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 CCT4P50991 539 aaKnown RBP18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 ANKRD31Q8N7Z5 1873 aa18.35■□□□□ 0.53
NPLOC4-209ENST00000572760 MYH3P11055 1940 aa18.34■□□□□ 0.53
NPLOC4-209ENST00000572760 GCKRQ14397 625 aa18.34■□□□□ 0.53
NPLOC4-209ENST00000572760 FAM89AQ96GI7 184 aa18.34■□□□□ 0.53
NPLOC4-209ENST00000572760 C9orf78Q9NZ63 289 aaPredicted RBP18.34■□□□□ 0.53
NPLOC4-209ENST00000572760 CD2APQ9Y5K6 639 aa18.34■□□□□ 0.53
NPLOC4-209ENST00000572760 PCCAP05165 728 aaPredicted RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 ZBTB38Q8NAP3 1195 aaPredicted RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 JARID2Q92833 1246 aaPredicted RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 BRIP1Q9BX63 1249 aa18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 FHDC1Q9C0D6 1143 aaPredicted RBP18.33■□□□□ 0.52
NPLOC4-209ENST00000572760 C10orf71Q711Q0 1435 aa18.32■□□□□ 0.52
NPLOC4-209ENST00000572760 PLIN1O60240 522 aa18.32■□□□□ 0.52
NPLOC4-209ENST00000572760 PDE6BP35913 854 aa18.32■□□□□ 0.52
NPLOC4-209ENST00000572760 TNNQ9UQP3 1299 aa18.32■□□□□ 0.52
NPLOC4-209ENST00000572760 ABCC4O15439 1325 aa18.31■□□□□ 0.52
NPLOC4-209ENST00000572760 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
NPLOC4-209ENST00000572760 NLRP3Q96P20 1036 aa18.31■□□□□ 0.52
NPLOC4-209ENST00000572760 DDX60Q8IY21 1712 aaKnown RBP18.31■□□□□ 0.52
NPLOC4-209ENST00000572760 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 LAMB2P55268 1798 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 GRM8O00222 908 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 IRS4O14654 1257 aaPredicted RBP18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 HCLS1P14317 486 aaPredicted RBP18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 SLC10A5Q5PT55 438 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 SYNE4Q8N205 404 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 PDZRN3Q9UPQ7 1066 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 CACNA1SQ13698 1873 aa18.3■□□□□ 0.52
NPLOC4-209ENST00000572760 H0YIN7 160 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 H7C1W4 665 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 TGFB2P61812 414 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 C2CD5Q86YS7 1000 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 SYT17Q9BSW7 474 aa18.29■□□□□ 0.52
NPLOC4-209ENST00000572760 CDHR2Q9BYE9 1310 aa18.28■□□□□ 0.52
NPLOC4-209ENST00000572760 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
NPLOC4-209ENST00000572760 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
NPLOC4-209ENST00000572760 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
NPLOC4-209ENST00000572760 PDE8AO60658 829 aa18.27■□□□□ 0.52
NPLOC4-209ENST00000572760 CENPBP07199 599 aaPredicted RBP18.27■□□□□ 0.52
NPLOC4-209ENST00000572760 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-209ENST00000572760 RPGRQ92834 1020 aaKnown RBP18.27■□□□□ 0.52
NPLOC4-209ENST00000572760 RIC1Q4ADV7 1423 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 A0A0G2JLW4 131 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 RLBP1P12271 317 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 DPEP1P16444 411 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 CHRNA5P30532 468 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.514e-14■□□□□ 10.9
NPLOC4-209ENST00000572760 HDAC5Q9UQL6 1122 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 DLEC1Q9Y238 1755 aa18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 COL11A2P13942 1736 aaPredicted RBP18.26■□□□□ 0.51
NPLOC4-209ENST00000572760 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 UBTFL1P0CB47 393 aaPredicted RBP18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 PDE3AQ14432 1141 aa18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 NLGN2Q8NFZ4 835 aa18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 USP44Q9H0E7 712 aa18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 SUPT16HQ9Y5B9 1047 aaKnown RBP18.25■□□□□ 0.51
NPLOC4-209ENST00000572760 KIAA1551Q9HCM1 1747 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 GNAI3P08754 354 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 CASP7P55210 303 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 MASTLQ96GX5 879 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 TAF1P21675 1872 aa18.24■□□□□ 0.51
NPLOC4-209ENST00000572760 BRCA1P38398 1863 aaKnown RBP18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 NPR1P16066 1061 aa18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 C3orf67Q6ZVT6 689 aa18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 PIM2Q9P1W9 311 aa18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 WWC3Q9ULE0 1092 aa18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 UTYO14607 1347 aa18.23■□□□□ 0.51
NPLOC4-209ENST00000572760 KLRG2A4D1S0 409 aaPredicted RBP18.22■□□□□ 0.51
NPLOC4-209ENST00000572760 SRGNP10124 158 aa18.22■□□□□ 0.51
NPLOC4-209ENST00000572760 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
NPLOC4-209ENST00000572760 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms