RNA–Protein interactions for RNA: ENST00000571120.5

ABR-210, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-210ENST00000571120 DUSP27Q5VZP5 1158 aa15.77■□□□□ 0.12
ABR-210ENST00000571120 LAMB2P55268 1798 aa15.77■□□□□ 0.11
ABR-210ENST00000571120 RNF123Q5XPI4 1314 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 ALDH1B1P30837 517 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 GNAI1P63096 354 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 CALD1Q05682 793 aaKnown RBP15.76■□□□□ 0.11
ABR-210ENST00000571120 OLFM4Q6UX06 510 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 C3orf67Q6ZVT6 689 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 PPP1R42Q7Z4L9 355 aa15.76■□□□□ 0.11
ABR-210ENST00000571120 DBF4Q9UBU7 674 aaPredicted RBP15.76■□□□□ 0.11
ABR-210ENST00000571120 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
ABR-210ENST00000571120 TCIRG1Q13488 830 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 HSP90AB3PQ58FF7 597 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 SLC10A5Q5PT55 438 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 NLRP10Q86W26 655 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 RBM46Q8TBY0 533 aaKnown RBP15.75■□□□□ 0.11
ABR-210ENST00000571120 RRAGCQ9HB90 399 aa15.75■□□□□ 0.11
ABR-210ENST00000571120 POTECB2RU33 542 aa15.74■□□□□ 0.11
ABR-210ENST00000571120 FKBP4Q02790 459 aaKnown RBP eCLIP15.74■□□□□ 0.11
ABR-210ENST00000571120 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
ABR-210ENST00000571120 UTP14AQ9BVJ6 771 aaKnown RBP15.74■□□□□ 0.11
ABR-210ENST00000571120 RTKN2Q8IZC4 609 aa15.73■□□□□ 0.11
ABR-210ENST00000571120 PLBD2Q8NHP8 589 aa15.73■□□□□ 0.11
ABR-210ENST00000571120 HYPKQ9NX55 129 aa15.73■□□□□ 0.11
ABR-210ENST00000571120 DDX60Q8IY21 1712 aaKnown RBP15.73■□□□□ 0.11
ABR-210ENST00000571120 ANP32CO43423 234 aa15.72■□□□□ 0.11
ABR-210ENST00000571120 WWC1Q8IX03 1113 aa15.72■□□□□ 0.11
ABR-210ENST00000571120 C8orf58Q8NAV2 365 aa15.72■□□□□ 0.11
ABR-210ENST00000571120 RPGRQ92834 1020 aaKnown RBP15.72■□□□□ 0.11
ABR-210ENST00000571120 CRAMP1Q96RY5 1269 aa15.72■□□□□ 0.11
ABR-210ENST00000571120 PSMD1Q99460 953 aa15.72■□□□□ 0.11
ABR-210ENST00000571120 COL4A5P29400 1685 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 VEGFAP15692 232 aaPredicted RBP15.71■□□□□ 0.11
ABR-210ENST00000571120 FSTL1Q12841 308 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 SLC51AQ86UW1 340 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 RBM17Q96I25 401 aaKnown RBP15.71■□□□□ 0.11
ABR-210ENST00000571120 NLRP3Q96P20 1036 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 MRS2Q9HD23 443 aa15.71■□□□□ 0.11
ABR-210ENST00000571120 CC2D2BQ6DHV5 1058 aa15.7■□□□□ 0.1
ABR-210ENST00000571120 DPY19L2Q6NUT2 758 aa15.7■□□□□ 0.1
ABR-210ENST00000571120 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
ABR-210ENST00000571120 SYNE4Q8N205 404 aa15.7■□□□□ 0.1
ABR-210ENST00000571120 ZNF277Q9NRM2 450 aaPredicted RBP15.7■□□□□ 0.1
ABR-210ENST00000571120 SH3TC1Q8TE82 1336 aa15.69■□□□□ 0.1
ABR-210ENST00000571120 ELL2O00472 640 aaPredicted RBP15.69■□□□□ 0.1
ABR-210ENST00000571120 PPEF1O14829 653 aaPredicted RBP15.69■□□□□ 0.1
ABR-210ENST00000571120 TRIM28Q13263 835 aaKnown RBP15.69■□□□□ 0.1
ABR-210ENST00000571120 TSPYL6Q8N831 410 aa15.69■□□□□ 0.1
ABR-210ENST00000571120 PHAXQ9H814 394 aaKnown RBP15.69■□□□□ 0.1
ABR-210ENST00000571120 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
ABR-210ENST00000571120 ABCC4O15439 1325 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 IL16Q14005 1332 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 HCLS1P14317 486 aaPredicted RBP15.68■□□□□ 0.1
ABR-210ENST00000571120 IARSP41252 1262 aaKnown RBP15.68■□□□□ 0.1
ABR-210ENST00000571120 APLP1P51693 650 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 GRIPAP1Q4V328 841 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
ABR-210ENST00000571120 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
ABR-210ENST00000571120 SCN4AP35499 1836 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 ZNF541Q9H0D2 1346 aa15.68■□□□□ 0.1
ABR-210ENST00000571120 FZD9O00144 591 aa15.67■□□□□ 0.1
ABR-210ENST00000571120 DDNO94850 711 aaPredicted RBP15.67■□□□□ 0.1
ABR-210ENST00000571120 SMC1BQ8NDV3 1235 aa15.67■□□□□ 0.1
ABR-210ENST00000571120 TAF1P21675 1872 aa15.66■□□□□ 0.1
ABR-210ENST00000571120 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
ABR-210ENST00000571120 ATP6V0A2Q9Y487 856 aa15.66■□□□□ 0.1
ABR-210ENST00000571120 COL4A1P02462 1669 aa15.66■□□□□ 0.1
ABR-210ENST00000571120 GOLGA2Q08379 1002 aa15.65■□□□□ 0.1
ABR-210ENST00000571120 CCDC30Q5VVM6 783 aa15.65■□□□□ 0.1
ABR-210ENST00000571120 DUOX1Q9NRD9 1551 aa15.65■□□□□ 0.1
ABR-210ENST00000571120 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.1
ABR-210ENST00000571120 BBOX1O75936 387 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 SF3B3Q15393 1217 aaKnown RBP15.64■□□□□ 0.09
ABR-210ENST00000571120 RIC3Q7Z5B4 369 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 DNAJC5GQ8N7S2 189 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 ZNF428Q96B54 188 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
ABR-210ENST00000571120 GRAPQ13588 217 aa15.63■□□□□ 0.09
ABR-210ENST00000571120 GRAPLQ8TC17 118 aaPredicted RBP15.63■□□□□ 0.09
ABR-210ENST00000571120 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
ABR-210ENST00000571120 FANCIQ9NVI1 1328 aa15.63■□□□□ 0.09
ABR-210ENST00000571120 LTBP1Q14766 1721 aa15.63■□□□□ 0.09
ABR-210ENST00000571120 TCERG1O14776 1098 aaKnown RBP15.62■□□□□ 0.09
ABR-210ENST00000571120 POTEIP0CG38 1075 aa15.62■□□□□ 0.09
ABR-210ENST00000571120 POTEJP0CG39 1038 aa15.62■□□□□ 0.09
ABR-210ENST00000571120 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
ABR-210ENST00000571120 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
ABR-210ENST00000571120 WDR63Q8IWG1 891 aa15.62■□□□□ 0.09
ABR-210ENST00000571120 SP8Q8IXZ3 490 aa15.62■□□□□ 0.09
ABR-210ENST00000571120 ZBTB38Q8NAP3 1195 aaPredicted RBP15.62■□□□□ 0.09
ABR-210ENST00000571120 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
ABR-210ENST00000571120 GPC2Q8N158 579 aa15.61■□□□□ 0.09
ABR-210ENST00000571120 CCDC191Q8NCU4 936 aa15.61■□□□□ 0.09
ABR-210ENST00000571120 JDP2Q8WYK2 163 aa15.61■□□□□ 0.09
ABR-210ENST00000571120 MYD88Q99836 296 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms