RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 PPP1R42Q7Z4L9 355 aa26.98■■□□□ 1.91
LITAF-205ENST00000570904 RPGRQ92834 1020 aaKnown RBP26.98■■□□□ 1.91
LITAF-205ENST00000570904 DDNO94850 711 aaPredicted RBP26.97■■□□□ 1.91
LITAF-205ENST00000570904 RTKN2Q8IZC4 609 aa26.97■■□□□ 1.91
LITAF-205ENST00000570904 DDX21Q9NR30 783 aaKnown RBP eCLIP26.97■■□□□ 1.91
LITAF-205ENST00000570904 CHPF2Q9P2E5 772 aa26.96■■□□□ 1.91
LITAF-205ENST00000570904 APAF1O14727 1248 aa26.95■■□□□ 1.9
LITAF-205ENST00000570904 HDGFL1Q5TGJ6 251 aa26.95■■□□□ 1.9
LITAF-205ENST00000570904 DNAJC5GQ8N7S2 189 aa26.95■■□□□ 1.9
LITAF-205ENST00000570904 UTP14AQ9BVJ6 771 aaKnown RBP26.95■■□□□ 1.9
LITAF-205ENST00000570904 SNED1Q8TER0 1413 aa26.94■■□□□ 1.9
LITAF-205ENST00000570904 HOXA10P31260 410 aaPredicted RBP26.94■■□□□ 1.9
LITAF-205ENST00000570904 SLC51AQ86UW1 340 aa26.94■■□□□ 1.9
LITAF-205ENST00000570904 CFAP44Q96MT7 982 aa26.94■■□□□ 1.9
LITAF-205ENST00000570904 SYNE4Q8N205 404 aa26.93■■□□□ 1.9
LITAF-205ENST00000570904 RBM17Q96I25 401 aaKnown RBP26.93■■□□□ 1.9
LITAF-205ENST00000570904 MBIPQ9NS73 344 aa26.93■■□□□ 1.9
LITAF-205ENST00000570904 HOXB7P09629 217 aa26.92■■□□□ 1.9
LITAF-205ENST00000570904 HSP90AB3PQ58FF7 597 aa26.92■■□□□ 1.9
LITAF-205ENST00000570904 ANKRD36CQ5JPF3 1778 aa26.92■■□□□ 1.9
LITAF-205ENST00000570904 ZNF541Q9H0D2 1346 aa26.91■■□□□ 1.9
LITAF-205ENST00000570904 IARSP41252 1262 aaKnown RBP26.91■■□□□ 1.9
LITAF-205ENST00000570904 NLRP10Q86W26 655 aa26.91■■□□□ 1.9
LITAF-205ENST00000570904 NLRP3Q96P20 1036 aa26.91■■□□□ 1.9
LITAF-205ENST00000570904 CRAMP1Q96RY5 1269 aa26.91■■□□□ 1.9
LITAF-205ENST00000570904 TCERG1O14776 1098 aaKnown RBP26.9■■□□□ 1.9
LITAF-205ENST00000570904 DUSP27Q5VZP5 1158 aa26.9■■□□□ 1.9
LITAF-205ENST00000570904 PPEF1O14829 653 aaPredicted RBP26.89■■□□□ 1.9
LITAF-205ENST00000570904 TCIRG1Q13488 830 aa26.89■■□□□ 1.9
LITAF-205ENST00000570904 SLC10A5Q5PT55 438 aa26.89■■□□□ 1.9
LITAF-205ENST00000570904 ZNF428Q96B54 188 aa26.89■■□□□ 1.9
LITAF-205ENST00000570904 PSMD1Q99460 953 aa26.89■■□□□ 1.9
LITAF-205ENST00000570904 ZNF853P0CG23 659 aa26.88■■□□□ 1.89
LITAF-205ENST00000570904 CC2D2BQ6DHV5 1058 aa26.88■■□□□ 1.89
LITAF-205ENST00000570904 RNF123Q5XPI4 1314 aa26.88■■□□□ 1.89
LITAF-205ENST00000570904 POTEIP0CG38 1075 aa26.87■■□□□ 1.89
LITAF-205ENST00000570904 POTEJP0CG39 1038 aa26.87■■□□□ 1.89
LITAF-205ENST00000570904 HCLS1P14317 486 aaPredicted RBP26.87■■□□□ 1.89
LITAF-205ENST00000570904 CCDC184Q52MB2 194 aa26.87■■□□□ 1.89
LITAF-205ENST00000570904 IFT57Q9NWB7 429 aa26.87■■□□□ 1.89
LITAF-205ENST00000570904 DBF4Q9UBU7 674 aaPredicted RBP26.87■■□□□ 1.89
LITAF-205ENST00000570904 KLRG1Q96E93 195 aa26.86■■□□□ 1.89
LITAF-205ENST00000570904 L3MBTL3Q96JM7 780 aaPredicted RBP26.86■■□□□ 1.89
LITAF-205ENST00000570904 TRMT112Q9UI30 125 aaKnown RBP26.86■■□□□ 1.89
LITAF-205ENST00000570904 PLBD2Q8NHP8 589 aa26.85■■□□□ 1.89
LITAF-205ENST00000570904 COL4A5P29400 1685 aa26.85■■□□□ 1.89
LITAF-205ENST00000570904 ABCC4O15439 1325 aa26.85■■□□□ 1.89
LITAF-205ENST00000570904 IQCA1LA6NCM1 817 aa26.84■■□□□ 1.89
LITAF-205ENST00000570904 FZD9O00144 591 aa26.84■■□□□ 1.89
LITAF-205ENST00000570904 GNAI1P63096 354 aa26.84■■□□□ 1.89
LITAF-205ENST00000570904 CALD1Q05682 793 aaKnown RBP26.83■■□□□ 1.89
LITAF-205ENST00000570904 CHADLQ6NUI6 762 aa26.83■■□□□ 1.89
LITAF-205ENST00000570904 ANKRD13DQ6ZTN6 518 aa26.83■■□□□ 1.89
LITAF-205ENST00000570904 TAF1DQ9H5J8 278 aaPredicted RBP26.83■■□□□ 1.89
LITAF-205ENST00000570904 HYPKQ9NX55 129 aa26.83■■□□□ 1.89
LITAF-205ENST00000570904 SH3TC1Q8TE82 1336 aa26.83■■□□□ 1.89
LITAF-205ENST00000570904 LAMB2P55268 1798 aa26.82■■□□□ 1.88
LITAF-205ENST00000570904 ELL2O00472 640 aaPredicted RBP26.82■■□□□ 1.88
LITAF-205ENST00000570904 ZEB1P37275 1124 aaPredicted RBP26.82■■□□□ 1.88
LITAF-205ENST00000570904 JDP2Q8WYK2 163 aa26.82■■□□□ 1.88
LITAF-205ENST00000570904 ATP5J2-PTCD1G3V325 749 aa26.81■■□□□ 1.88
LITAF-205ENST00000570904 GRIPAP1Q4V328 841 aa26.81■■□□□ 1.88
LITAF-205ENST00000570904 LARGE2Q8N3Y3 721 aa26.8■■□□□ 1.88
LITAF-205ENST00000570904 ISCA1Q9BUE6 129 aa26.8■■□□□ 1.88
LITAF-205ENST00000570904 ATP6V0A2Q9Y487 856 aa26.8■■□□□ 1.88
LITAF-205ENST00000570904 SCN4AP35499 1836 aa26.8■■□□□ 1.88
LITAF-205ENST00000570904 HACL1Q9UJ83 578 aa26.79■■□□□ 1.88
LITAF-205ENST00000570904 EAPPQ56P03 285 aaPredicted RBP26.78■■□□□ 1.88
LITAF-205ENST00000570904 C8orf58Q8NAV2 365 aa26.78■■□□□ 1.88
LITAF-205ENST00000570904 TMX4Q9H1E5 349 aaPredicted RBP26.78■■□□□ 1.88
LITAF-205ENST00000570904 EIF6P56537 245 aaKnown RBP26.77■■□□□ 1.88
LITAF-205ENST00000570904 DDX46Q7L014 1031 aaKnown RBP26.77■■□□□ 1.88
LITAF-205ENST00000570904 LDHDQ86WU2 507 aa26.77■■□□□ 1.88
LITAF-205ENST00000570904 GPC2Q8N158 579 aa26.77■■□□□ 1.88
LITAF-205ENST00000570904 FAM89AQ96GI7 184 aa26.77■■□□□ 1.88
LITAF-205ENST00000570904 PHAXQ9H814 394 aaKnown RBP26.77■■□□□ 1.88
LITAF-205ENST00000570904 EPHX2P34913 555 aa26.76■■□□□ 1.87
LITAF-205ENST00000570904 JMYQ8N9B5 988 aa26.76■■□□□ 1.87
LITAF-205ENST00000570904 GJA3Q9Y6H8 435 aa26.76■■□□□ 1.87
LITAF-205ENST00000570904 PCNTO95613 3336 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 PPIP5K2O43314 1243 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 BBOX1O75936 387 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 GOLGA2Q08379 1002 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 GRAPQ13588 217 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 AOC3Q16853 763 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 RIC3Q7Z5B4 369 aa26.75■■□□□ 1.87
LITAF-205ENST00000570904 GRAPLQ8TC17 118 aaPredicted RBP26.75■■□□□ 1.87
LITAF-205ENST00000570904 DDX60Q8IY21 1712 aaKnown RBP26.75■■□□□ 1.87
LITAF-205ENST00000570904 RTL5Q5HYW3 569 aaPredicted RBP26.74■■□□□ 1.87
LITAF-205ENST00000570904 NIM1KQ8IY84 436 aa26.74■■□□□ 1.87
LITAF-205ENST00000570904 SP8Q8IXZ3 490 aa26.73■■□□□ 1.87
LITAF-205ENST00000570904 TSR2Q969E8 191 aaKnown RBP26.73■■□□□ 1.87
LITAF-205ENST00000570904 ZNF316A6NFI3 1004 aaPredicted RBP26.72■■□□□ 1.87
LITAF-205ENST00000570904 DPP8Q6V1X1 898 aaPredicted RBP26.72■■□□□ 1.87
LITAF-205ENST00000570904 TSPYL6Q8N831 410 aa26.72■■□□□ 1.87
LITAF-205ENST00000570904 CLEC11AQ9Y240 323 aa26.72■■□□□ 1.87
LITAF-205ENST00000570904 TAF1P21675 1872 aa26.71■■□□□ 1.87
LITAF-205ENST00000570904 TRIM28Q13263 835 aaKnown RBP26.71■■□□□ 1.87
LITAF-205ENST00000570904 MPNDQ8N594 471 aa26.71■■□□□ 1.87
LITAF-205ENST00000570904 RTFDC1Q9BY42 306 aaPredicted RBP26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms