RNA–Protein interactions for RNA: ENST00000569732.1

CNOT1-218, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-218ENST00000569732 BRCA1P38398 1863 aaKnown RBP9.73□□□□□ -0.85
CNOT1-218ENST00000569732 HOXB1P14653 301 aaPredicted RBP9.73□□□□□ -0.85
CNOT1-218ENST00000569732 ITPK1Q13572 414 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 ARHGAP27Q6ZUM4 889 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 SMIM5Q71RC9 77 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 NMRK2Q9NPI5 230 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 CCDC87Q9NVE4 849 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 FAM198AQ9UFP1 575 aa9.73□□□□□ -0.85
CNOT1-218ENST00000569732 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
CNOT1-218ENST00000569732 ARFGEF1Q9Y6D6 1849 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 TNRC6CQ9HCJ0 1690 aaKnown RBP9.72□□□□□ -0.85
CNOT1-218ENST00000569732 A0A0G2JLW4 131 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 IFNL2Q8IZJ0 200 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 EYA1Q99502 592 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 KDM2BQ8NHM5 1336 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 KDRP35968 1356 aa9.72□□□□□ -0.85
CNOT1-218ENST00000569732 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.85
CNOT1-218ENST00000569732 RCCD1A6NED2 376 aa9.71□□□□□ -0.86
CNOT1-218ENST00000569732 COL13A1Q5TAT6 717 aaPredicted RBP9.71□□□□□ -0.86
CNOT1-218ENST00000569732 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
CNOT1-218ENST00000569732 ASAP1Q9ULH1 1129 aa9.71□□□□□ -0.86
CNOT1-218ENST00000569732 GYS1P13807 737 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 PHKG2P15735 406 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 C9orf131Q5VYM1 1079 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 NUDT18Q6ZVK8 323 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 ATG3Q9NT62 314 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 POLR3EQ9NVU0 708 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 PARP3Q9Y6F1 533 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
CNOT1-218ENST00000569732 DPEP1P16444 411 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 KCNA3P22001 575 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 RFC4P35249 363 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 KCPQ6ZWJ8 1503 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 PACS2Q86VP3 889 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 PROCA1Q8NCQ7 364 aaPredicted RBP9.69□□□□□ -0.86
CNOT1-218ENST00000569732 PIM2Q9P1W9 311 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 EMILIN1Q9Y6C2 1016 aa9.69□□□□□ -0.86
CNOT1-218ENST00000569732 ZC3H4Q9UPT8 1303 aaKnown RBP9.68□□□□□ -0.86
CNOT1-218ENST00000569732 TRIM6-TRIM34B2RNG4 842 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 NBPF26B4DH59 902 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 ERVV-2B6SEH9 535 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 PER1O15534 1290 aaPredicted RBP9.68□□□□□ -0.86
CNOT1-218ENST00000569732 RPS6KA4O75676 772 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 HSP90AB1P08238 724 aaKnown RBP9.68□□□□□ -0.86
CNOT1-218ENST00000569732 PRELPP51888 382 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 MYSM1Q5VVJ2 828 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 TNS4Q8IZW8 715 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 TATDN2Q93075 761 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 PANK3Q9H999 370 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
CNOT1-218ENST00000569732 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
CNOT1-218ENST00000569732 HTRA3P83110 453 aa9.67□□□□□ -0.86
CNOT1-218ENST00000569732 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
CNOT1-218ENST00000569732 SMC1BQ8NDV3 1235 aa9.67□□□□□ -0.86
CNOT1-218ENST00000569732 TBC1D2Q9BYX2 928 aa9.67□□□□□ -0.86
CNOT1-218ENST00000569732 RNF181Q9P0P0 153 aa9.67□□□□□ -0.86
CNOT1-218ENST00000569732 DNAJB2P25686 324 aa9.66□□□□□ -0.86
CNOT1-218ENST00000569732 SULF1Q8IWU6 871 aa9.66□□□□□ -0.86
CNOT1-218ENST00000569732 SLC4A9Q96Q91 983 aa9.66□□□□□ -0.86
CNOT1-218ENST00000569732 RRAGCQ9HB90 399 aa9.66□□□□□ -0.86
CNOT1-218ENST00000569732 PCNTO95613 3336 aa9.66□□□□□ -0.86
CNOT1-218ENST00000569732 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
CNOT1-218ENST00000569732 KCNK17Q96T54 332 aa9.65□□□□□ -0.86
CNOT1-218ENST00000569732 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.87
CNOT1-218ENST00000569732 USP42Q9H9J4 1324 aaKnown RBP9.64□□□□□ -0.87
CNOT1-218ENST00000569732 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
CNOT1-218ENST00000569732 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
CNOT1-218ENST00000569732 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.64□□□□□ -0.87
CNOT1-218ENST00000569732 SBF1O95248 1867 aa9.64□□□□□ -0.87
CNOT1-218ENST00000569732 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 DDX11L8A8MPP1 907 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 CD46P15529 392 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 PROX2Q3B8N5 592 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 TMEM134Q9H6X4 195 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
CNOT1-218ENST00000569732 TJP1Q07157 1748 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 GLTPD2A6NH11 291 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 HSPA1AP0DMV8 641 aaKnown RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 HSPA1BP0DMV9 641 aaKnown RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 VEGFAP15692 232 aaPredicted RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 LMNB1P20700 586 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 CRKLP46109 303 aaKnown RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 CABP4P57796 275 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 EIF4A2Q14240 407 aaKnown RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 AMOTQ4VCS5 1084 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 PLEKHO1Q53GL0 409 aaPredicted RBP9.62□□□□□ -0.87
CNOT1-218ENST00000569732 SPIRE2Q8WWL2 714 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 OTUD5Q96G74 571 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 DLEC1Q9Y238 1755 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 TIAM2Q8IVF5 1701 aa9.62□□□□□ -0.87
CNOT1-218ENST00000569732 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
CNOT1-218ENST00000569732 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
CNOT1-218ENST00000569732 SMAPO00193 183 aa9.61□□□□□ -0.87
CNOT1-218ENST00000569732 POLRMTO00411 1230 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms