RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 NMRK2Q9NPI5 230 aa26.1■■□□□ 1.77
ABCA3-206ENST00000569062 HYPKQ9NX55 129 aa26.1■■□□□ 1.77
ABCA3-206ENST00000569062 NLRP10Q86W26 655 aa26.09■■□□□ 1.77
ABCA3-206ENST00000569062 PLBD2Q8NHP8 589 aa26.09■■□□□ 1.77
ABCA3-206ENST00000569062 UTP14AQ9BVJ6 771 aaKnown RBP26.09■■□□□ 1.77
ABCA3-206ENST00000569062 ALDH1B1P30837 517 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 SOGA3Q5TF21 947 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 OLFM4Q6UX06 510 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 ANKRD13DQ6ZTN6 518 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 C3orf67Q6ZVT6 689 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 TSPYL6Q8N831 410 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 TAOK3Q9H2K8 898 aa26.08■■□□□ 1.77
ABCA3-206ENST00000569062 SALL2Q9Y467 1007 aaPredicted RBP26.08■■□□□ 1.77
ABCA3-206ENST00000569062 LAMB2P55268 1798 aa26.07■■□□□ 1.76
ABCA3-206ENST00000569062 FAM9BQ8IZU0 186 aa26.07■■□□□ 1.76
ABCA3-206ENST00000569062 ZNF428Q96B54 188 aa26.07■■□□□ 1.76
ABCA3-206ENST00000569062 PHAXQ9H814 394 aaKnown RBP26.07■■□□□ 1.76
ABCA3-206ENST00000569062 LTBP3Q9NS15 1303 aa26.07■■□□□ 1.76
ABCA3-206ENST00000569062 NCBP3Q53F19 620 aaKnown RBP26.06■■□□□ 1.76
ABCA3-206ENST00000569062 RPGRQ92834 1020 aaKnown RBP26.06■■□□□ 1.76
ABCA3-206ENST00000569062 ZC3H4Q9UPT8 1303 aaKnown RBP26.06■■□□□ 1.76
ABCA3-206ENST00000569062 CCDC93Q567U6 631 aa26.05■■□□□ 1.76
ABCA3-206ENST00000569062 SYNE4Q8N205 404 aa26.05■■□□□ 1.76
ABCA3-206ENST00000569062 KDM2BQ8NHM5 1336 aa26.05■■□□□ 1.76
ABCA3-206ENST00000569062 HOXA10P31260 410 aaPredicted RBP26.04■■□□□ 1.76
ABCA3-206ENST00000569062 SLC10A5Q5PT55 438 aa26.04■■□□□ 1.76
ABCA3-206ENST00000569062 NLRP3Q96P20 1036 aa26.03■■□□□ 1.76
ABCA3-206ENST00000569062 TRMT112Q9UI30 125 aaKnown RBP26.03■■□□□ 1.76
ABCA3-206ENST00000569062 IL16Q14005 1332 aa26.03■■□□□ 1.76
ABCA3-206ENST00000569062 RNF123Q5XPI4 1314 aa26.03■■□□□ 1.76
ABCA3-206ENST00000569062 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
ABCA3-206ENST00000569062 ISCA1Q9BUE6 129 aa26.02■■□□□ 1.76
ABCA3-206ENST00000569062 RRAGCQ9HB90 399 aa26.02■■□□□ 1.76
ABCA3-206ENST00000569062 DDX60Q8IY21 1712 aaKnown RBP26.02■■□□□ 1.76
ABCA3-206ENST00000569062 HCLS1P14317 486 aaPredicted RBP26.01■■□□□ 1.75
ABCA3-206ENST00000569062 CCDC30Q5VVM6 783 aa26.01■■□□□ 1.75
ABCA3-206ENST00000569062 RBM17Q96I25 401 aaKnown RBP26.01■■□□□ 1.75
ABCA3-206ENST00000569062 GLTPD2A6NH11 291 aa26■■□□□ 1.75
ABCA3-206ENST00000569062 RIC3Q7Z5B4 369 aa26■■□□□ 1.75
ABCA3-206ENST00000569062 SLC51AQ86UW1 340 aa26■■□□□ 1.75
ABCA3-206ENST00000569062 CRAMP1Q96RY5 1269 aa26■■□□□ 1.75
ABCA3-206ENST00000569062 SNED1Q8TER0 1413 aa25.99■■□□□ 1.75
ABCA3-206ENST00000569062 SH3TC1Q8TE82 1336 aa25.99■■□□□ 1.75
ABCA3-206ENST00000569062 FKBP4Q02790 459 aaKnown RBP eCLIP25.99■■□□□ 1.75
ABCA3-206ENST00000569062 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
ABCA3-206ENST00000569062 TCERG1O14776 1098 aaKnown RBP25.98■■□□□ 1.75
ABCA3-206ENST00000569062 TOMM70O94826 608 aa25.98■■□□□ 1.75
ABCA3-206ENST00000569062 TWISTNBQ3B726 338 aaPredicted RBP25.98■■□□□ 1.75
ABCA3-206ENST00000569062 WDR63Q8IWG1 891 aa25.98■■□□□ 1.75
ABCA3-206ENST00000569062 RTKN2Q8IZC4 609 aa25.98■■□□□ 1.75
ABCA3-206ENST00000569062 TAF1P21675 1872 aa25.98■■□□□ 1.75
ABCA3-206ENST00000569062 FANCIQ9NVI1 1328 aa25.97■■□□□ 1.75
ABCA3-206ENST00000569062 ZNF277Q9NRM2 450 aaPredicted RBP25.97■■□□□ 1.75
ABCA3-206ENST00000569062 PPEF1O14829 653 aaPredicted RBP25.96■■□□□ 1.75
ABCA3-206ENST00000569062 FAM89AQ96GI7 184 aa25.96■■□□□ 1.75
ABCA3-206ENST00000569062 CHMP4AQ9BY43 222 aa25.96■■□□□ 1.75
ABCA3-206ENST00000569062 ABCC4O15439 1325 aa25.95■■□□□ 1.75
ABCA3-206ENST00000569062 WDR90Q96KV7 1748 aa25.94■■□□□ 1.74
ABCA3-206ENST00000569062 TRIM28Q13263 835 aaKnown RBP25.94■■□□□ 1.74
ABCA3-206ENST00000569062 RTL5Q5HYW3 569 aaPredicted RBP25.94■■□□□ 1.74
ABCA3-206ENST00000569062 DPY19L2Q6NUT2 758 aa25.94■■□□□ 1.74
ABCA3-206ENST00000569062 C16orf71Q8IYS4 520 aaPredicted RBP25.94■■□□□ 1.74
ABCA3-206ENST00000569062 MYD88Q99836 296 aa25.94■■□□□ 1.74
ABCA3-206ENST00000569062 SPINK5Q9NQ38 1064 aaPredicted RBP25.94■■□□□ 1.74
ABCA3-206ENST00000569062 CC2D2BQ6DHV5 1058 aa25.93■■□□□ 1.74
ABCA3-206ENST00000569062 STK31Q9BXU1 1019 aa25.93■■□□□ 1.74
ABCA3-206ENST00000569062 PSMD1Q99460 953 aa25.92■■□□□ 1.74
ABCA3-206ENST00000569062 POTECB2RU33 542 aa25.91■■□□□ 1.74
ABCA3-206ENST00000569062 DDX58O95786 925 aaKnown RBP25.91■■□□□ 1.74
ABCA3-206ENST00000569062 IARSP41252 1262 aaKnown RBP25.91■■□□□ 1.74
ABCA3-206ENST00000569062 G2E3Q7L622 706 aa25.91■■□□□ 1.74
ABCA3-206ENST00000569062 DDNO94850 711 aaPredicted RBP25.9■■□□□ 1.74
ABCA3-206ENST00000569062 VEGFAP15692 232 aaPredicted RBP25.9■■□□□ 1.74
ABCA3-206ENST00000569062 HSPA6P17066 643 aa25.9■■□□□ 1.74
ABCA3-206ENST00000569062 EXOSC9Q06265 439 aaKnown RBP25.9■■□□□ 1.74
ABCA3-206ENST00000569062 RBM46Q8TBY0 533 aaKnown RBP25.9■■□□□ 1.74
ABCA3-206ENST00000569062 METTL22Q9BUU2 404 aaPredicted RBP25.9■■□□□ 1.74
ABCA3-206ENST00000569062 MAP3K2Q9Y2U5 619 aa25.9■■□□□ 1.74
ABCA3-206ENST00000569062 SLC4A2P04920 1241 aa25.89■■□□□ 1.74
ABCA3-206ENST00000569062 DDX46Q7L014 1031 aaKnown RBP25.89■■□□□ 1.74
ABCA3-206ENST00000569062 ATP6V0A2Q9Y487 856 aa25.89■■□□□ 1.74
ABCA3-206ENST00000569062 CACNA1FO60840 1977 aa25.89■■□□□ 1.73
ABCA3-206ENST00000569062 CEP350Q5VT06 3117 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 COL4A5P29400 1685 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 PI4KAP2A4QPH2 592 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 IRS4O14654 1257 aaPredicted RBP25.88■■□□□ 1.73
ABCA3-206ENST00000569062 VAMP4O75379 141 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 KSR2Q6VAB6 950 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 PI4KAP1Q8N8J0 262 aa25.88■■□□□ 1.73
ABCA3-206ENST00000569062 ZBTB38Q8NAP3 1195 aaPredicted RBP25.88■■□□□ 1.73
ABCA3-206ENST00000569062 BBOX1O75936 387 aa25.87■■□□□ 1.73
ABCA3-206ENST00000569062 GRAPQ13588 217 aa25.87■■□□□ 1.73
ABCA3-206ENST00000569062 GRIPAP1Q4V328 841 aa25.87■■□□□ 1.73
ABCA3-206ENST00000569062 CCDC191Q8NCU4 936 aa25.87■■□□□ 1.73
ABCA3-206ENST00000569062 GRAPLQ8TC17 118 aaPredicted RBP25.87■■□□□ 1.73
ABCA3-206ENST00000569062 COL4A1P02462 1669 aa25.87■■□□□ 1.73
ABCA3-206ENST00000569062 SF3B3Q15393 1217 aaKnown RBP25.86■■□□□ 1.73
ABCA3-206ENST00000569062 JARID2Q92833 1246 aaPredicted RBP25.86■■□□□ 1.73
ABCA3-206ENST00000569062 ZNF541Q9H0D2 1346 aa25.86■■□□□ 1.73
ABCA3-206ENST00000569062 SP8Q8IXZ3 490 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms