RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 COL4A5P29400 1685 aa16.66■□□□□ 0.26
SNX29-207ENST00000568949 HTATSF1O43719 755 aaKnown RBP16.66■□□□□ 0.26
SNX29-207ENST00000568949 HOXA10P31260 410 aaPredicted RBP16.66■□□□□ 0.26
SNX29-207ENST00000568949 RGS19P49795 217 aa16.66■□□□□ 0.26
SNX29-207ENST00000568949 SCNN1DP51172 638 aa16.66■□□□□ 0.26
SNX29-207ENST00000568949 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
SNX29-207ENST00000568949 MCM10Q7L590 875 aa16.66■□□□□ 0.26
SNX29-207ENST00000568949 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
SNX29-207ENST00000568949 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
SNX29-207ENST00000568949 ABCC12Q96J65 1359 aa16.65■□□□□ 0.26
SNX29-207ENST00000568949 ERVV-1B6SEH8 477 aa16.65■□□□□ 0.26
SNX29-207ENST00000568949 EPS15P42566 896 aa16.65■□□□□ 0.26
SNX29-207ENST00000568949 LARGE2Q8N3Y3 721 aa16.65■□□□□ 0.26
SNX29-207ENST00000568949 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 NUP98P52948 1817 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 MAP2K2P36507 400 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 MLLT1Q03111 559 aaPredicted RBP16.64■□□□□ 0.25
SNX29-207ENST00000568949 CST9Q5W186 159 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 CYP4F22Q6NT55 531 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 PAXIP1Q6ZW49 1069 aaPredicted RBP16.64■□□□□ 0.25
SNX29-207ENST00000568949 NUTM1Q86Y26 1132 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
SNX29-207ENST00000568949 CRAMP1Q96RY5 1269 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 TLL2Q9Y6L7 1015 aa16.64■□□□□ 0.25
SNX29-207ENST00000568949 IBTKQ9P2D0 1353 aaPredicted RBP16.64■□□□□ 0.25
SNX29-207ENST00000568949 CCDC85CA6NKD9 419 aa16.63■□□□□ 0.25
SNX29-207ENST00000568949 FMR1Q06787 632 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNX29-207ENST00000568949 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
SNX29-207ENST00000568949 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
SNX29-207ENST00000568949 LAMB4A4D0S4 1761 aa16.63■□□□□ 0.25
SNX29-207ENST00000568949 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
SNX29-207ENST00000568949 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
SNX29-207ENST00000568949 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNX29-207ENST00000568949 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
SNX29-207ENST00000568949 NIM1KQ8IY84 436 aa16.62■□□□□ 0.25
SNX29-207ENST00000568949 RBM17Q96I25 401 aaKnown RBP16.62■□□□□ 0.25
SNX29-207ENST00000568949 VPS33BQ9H267 617 aa16.62■□□□□ 0.25
SNX29-207ENST00000568949 TRAF5O00463 557 aa16.61■□□□□ 0.25
SNX29-207ENST00000568949 CA12O43570 354 aa16.61■□□□□ 0.25
SNX29-207ENST00000568949 GRM1Q13255 1194 aa16.61■□□□□ 0.25
SNX29-207ENST00000568949 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
SNX29-207ENST00000568949 PPEF1O14829 653 aaPredicted RBP16.6■□□□□ 0.25
SNX29-207ENST00000568949 KIF6Q6ZMV9 814 aa16.6■□□□□ 0.25
SNX29-207ENST00000568949 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
SNX29-207ENST00000568949 HHIPL1Q96JK4 782 aa16.6■□□□□ 0.25
SNX29-207ENST00000568949 GPRC5DQ9NZD1 345 aa16.6■□□□□ 0.25
SNX29-207ENST00000568949 SUSD4Q5VX71 490 aa16.59■□□□□ 0.25
SNX29-207ENST00000568949 SAPCD2Q86UD0 394 aa16.59■□□□□ 0.25
SNX29-207ENST00000568949 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
SNX29-207ENST00000568949 PPIP5K2O43314 1243 aa16.58■□□□□ 0.24
SNX29-207ENST00000568949 AOC2O75106 756 aa16.58■□□□□ 0.24
SNX29-207ENST00000568949 TTLL7Q6ZT98 887 aa16.58■□□□□ 0.24
SNX29-207ENST00000568949 CCER1Q8TC90 406 aaPredicted RBP16.58■□□□□ 0.24
SNX29-207ENST00000568949 TMX4Q9H1E5 349 aaPredicted RBP16.58■□□□□ 0.24
SNX29-207ENST00000568949 UBN2Q6ZU65 1347 aa16.58■□□□□ 0.24
SNX29-207ENST00000568949 NTSR2O95665 410 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 GPTP24298 496 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 BRPF1P55201 1214 aaPredicted RBP16.57■□□□□ 0.24
SNX29-207ENST00000568949 AOC3Q16853 763 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 ZNF34Q8IZ26 560 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 SUPT20HQ8NEM7 779 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 MIS18AQ9NYP9 233 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 PCDH10Q9P2E7 1040 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 PGAP2Q9UHJ9 254 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 TSKSQ9UJT2 592 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
SNX29-207ENST00000568949 CDHR2Q9BYE9 1310 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 CELF2O95319 508 aaKnown RBP16.56■□□□□ 0.24
SNX29-207ENST00000568949 CXCL9Q07325 125 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 PPP1R42Q7Z4L9 355 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 NLRP3Q96P20 1036 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 RTFDC1Q9BY42 306 aaPredicted RBP16.56■□□□□ 0.24
SNX29-207ENST00000568949 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
SNX29-207ENST00000568949 ATP6V0A2Q9Y487 856 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 CASP8AP2Q9UKL3 1982 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
SNX29-207ENST00000568949 TCERG1O14776 1098 aaKnown RBP16.55■□□□□ 0.24
SNX29-207ENST00000568949 PARP10Q53GL7 1025 aa16.55■□□□□ 0.24
SNX29-207ENST00000568949 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
SNX29-207ENST00000568949 SLC51AQ86UW1 340 aa16.55■□□□□ 0.24
SNX29-207ENST00000568949 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
SNX29-207ENST00000568949 MCOLN1Q9GZU1 580 aa16.55■□□□□ 0.24
SNX29-207ENST00000568949 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
SNX29-207ENST00000568949 ERBB4Q15303 1308 aa16.54■□□□□ 0.24
SNX29-207ENST00000568949 MYL6BP14649 208 aa16.54■□□□□ 0.24
SNX29-207ENST00000568949 PPP2R1AP30153 589 aa16.54■□□□□ 0.24
SNX29-207ENST00000568949 GMPSP49915 693 aaPredicted RBP16.54■□□□□ 0.24
SNX29-207ENST00000568949 EIF4A1P60842 406 aaKnown RBP16.54■□□□□ 0.24
SNX29-207ENST00000568949 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
SNX29-207ENST00000568949 C3orf67Q6ZVT6 689 aa16.54■□□□□ 0.24
SNX29-207ENST00000568949 GLIS2Q9BZE0 524 aaPredicted RBP16.54■□□□□ 0.24
SNX29-207ENST00000568949 CIAPIN1Q6FI81 312 aa16.53■□□□□ 0.24
SNX29-207ENST00000568949 BBOX1O75936 387 aa16.52■□□□□ 0.24
SNX29-207ENST00000568949 TNIP1Q15025 636 aa16.52■□□□□ 0.24
SNX29-207ENST00000568949 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
SNX29-207ENST00000568949 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.23
SNX29-207ENST00000568949 PDE4DIPQ5VU43 2346 aa16.52■□□□□ 0.23
SNX29-207ENST00000568949 ABCC4O15439 1325 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 NEFMP07197 916 aa16.51■□□□□ 0.23
SNX29-207ENST00000568949 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms