RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 CCDC191Q8NCU4 936 aa25.81■■□□□ 1.72
RNF40-210ENST00000566811 BCL2L13Q9BXK5 485 aa25.81■■□□□ 1.72
RNF40-210ENST00000566811 PDZRN3Q9UPQ7 1066 aa25.81■■□□□ 1.72
RNF40-210ENST00000566811 KIAA1551Q9HCM1 1747 aa25.8■■□□□ 1.72
RNF40-210ENST00000566811 IPO8O15397 1037 aaKnown RBP25.8■■□□□ 1.72
RNF40-210ENST00000566811 GPTP24298 496 aa25.8■■□□□ 1.72
RNF40-210ENST00000566811 NLRP10Q86W26 655 aa25.8■■□□□ 1.72
RNF40-210ENST00000566811 YBX3P16989 372 aaKnown RBP eCLIP25.79■■□□□ 1.72
RNF40-210ENST00000566811 API5Q9BZZ5 524 aaKnown RBP25.79■■□□□ 1.72
RNF40-210ENST00000566811 PRR5LQ6MZQ0 368 aa25.78■■□□□ 1.72
RNF40-210ENST00000566811 LINS1Q8NG48 757 aa25.78■■□□□ 1.72
RNF40-210ENST00000566811 MYD88Q99836 296 aa25.78■■□□□ 1.72
RNF40-210ENST00000566811 UTP14AQ9BVJ6 771 aaKnown RBP25.78■■□□□ 1.72
RNF40-210ENST00000566811 BRCA1P38398 1863 aaKnown RBP25.77■■□□□ 1.72
RNF40-210ENST00000566811 NTSR2O95665 410 aa25.77■■□□□ 1.72
RNF40-210ENST00000566811 HSP90B1P14625 803 aaKnown RBP25.77■■□□□ 1.72
RNF40-210ENST00000566811 GTF2E1P29083 439 aaPredicted RBP25.77■■□□□ 1.72
RNF40-210ENST00000566811 CWC25Q9NXE8 425 aaPredicted RBP25.77■■□□□ 1.72
RNF40-210ENST00000566811 TGFB2P61812 414 aa25.76■■□□□ 1.71
RNF40-210ENST00000566811 BRIP1Q9BX63 1249 aa25.76■■□□□ 1.71
RNF40-210ENST00000566811 DDX60Q8IY21 1712 aaKnown RBP25.76■■□□□ 1.71
RNF40-210ENST00000566811 MYH3P11055 1940 aa25.76■■□□□ 1.71
RNF40-210ENST00000566811 SH3TC1Q8TE82 1336 aa25.75■■□□□ 1.71
RNF40-210ENST00000566811 SUSD4Q5VX71 490 aa25.75■■□□□ 1.71
RNF40-210ENST00000566811 PDE6BP35913 854 aa25.74■■□□□ 1.71
RNF40-210ENST00000566811 RCAN3Q9UKA8 241 aa25.74■■□□□ 1.71
RNF40-210ENST00000566811 NOB1Q9ULX3 412 aaKnown RBP25.74■■□□□ 1.71
RNF40-210ENST00000566811 COL11A2P13942 1736 aaPredicted RBP25.74■■□□□ 1.71
RNF40-210ENST00000566811 NEURL1BA8MQ27 555 aa25.73■■□□□ 1.71
RNF40-210ENST00000566811 ATP5J2-PTCD1G3V325 749 aa25.73■■□□□ 1.71
RNF40-210ENST00000566811 GRIN3BO60391 1043 aa25.73■■□□□ 1.71
RNF40-210ENST00000566811 ZBTB38Q8NAP3 1195 aaPredicted RBP25.73■■□□□ 1.71
RNF40-210ENST00000566811 TRMT112Q9UI30 125 aaKnown RBP25.73■■□□□ 1.71
RNF40-210ENST00000566811 TNRC6CQ9HCJ0 1690 aaKnown RBP25.73■■□□□ 1.71
RNF40-210ENST00000566811 ALDH1L1O75891 902 aa25.72■■□□□ 1.71
RNF40-210ENST00000566811 IGKV5-2P06315 115 aa25.72■■□□□ 1.71
RNF40-210ENST00000566811 SRCIN1Q9C0H9 1055 aa25.72■■□□□ 1.71
RNF40-210ENST00000566811 F6X3S4 739 aa25.71■■□□□ 1.71
RNF40-210ENST00000566811 BCAR3O75815 825 aa25.71■■□□□ 1.71
RNF40-210ENST00000566811 PCCAP05165 728 aaPredicted RBP25.71■■□□□ 1.71
RNF40-210ENST00000566811 BEND3Q5T5X7 828 aa25.71■■□□□ 1.71
RNF40-210ENST00000566811 ATF7IPQ6VMQ6 1270 aa25.71■■□□□ 1.71
RNF40-210ENST00000566811 CCT4P50991 539 aaKnown RBP25.7■■□□□ 1.7
RNF40-210ENST00000566811 ZKSCAN2Q63HK3 967 aa25.7■■□□□ 1.7
RNF40-210ENST00000566811 ABCC12Q96J65 1359 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 ABCC4O15439 1325 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 CDHR2Q9BYE9 1310 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 FAM177BA6PVY3 158 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 SLC10A5Q5PT55 438 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 SLC4A10Q6U841 1118 aa25.69■■□□□ 1.7
RNF40-210ENST00000566811 KLRG2A4D1S0 409 aaPredicted RBP25.68■■□□□ 1.7
RNF40-210ENST00000566811 MS4A1P11836 297 aa25.68■■□□□ 1.7
RNF40-210ENST00000566811 GCKRQ14397 625 aa25.68■■□□□ 1.7
RNF40-210ENST00000566811 ARFGEF1Q9Y6D6 1849 aa25.67■■□□□ 1.7
RNF40-210ENST00000566811 CWF19L2Q2TBE0 894 aaKnown RBP25.67■■□□□ 1.7
RNF40-210ENST00000566811 ERFEQ4G0M1 354 aa25.67■■□□□ 1.7
RNF40-210ENST00000566811 NUTM1Q86Y26 1132 aa25.67■■□□□ 1.7
RNF40-210ENST00000566811 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.67■■□□□ 1.7
RNF40-210ENST00000566811 FRAT1Q92837 279 aaPredicted RBP25.67■■□□□ 1.7
RNF40-210ENST00000566811 H0YIN7 160 aa25.66■■□□□ 1.7
RNF40-210ENST00000566811 TRIM27P14373 513 aa25.65■■□□□ 1.7
RNF40-210ENST00000566811 CRY2Q49AN0 593 aa25.65■■□□□ 1.7
RNF40-210ENST00000566811 NLRP3Q96P20 1036 aa25.65■■□□□ 1.7
RNF40-210ENST00000566811 CACNA1SQ13698 1873 aa25.64■■□□□ 1.7
RNF40-210ENST00000566811 FAM89AQ96GI7 184 aa25.64■■□□□ 1.7
RNF40-210ENST00000566811 GRM8O00222 908 aa25.63■■□□□ 1.69
RNF40-210ENST00000566811 FTSJ3Q8IY81 847 aaKnown RBP25.63■■□□□ 1.69
RNF40-210ENST00000566811 H7C1W4 665 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
RNF40-210ENST00000566811 INTS3Q68E01 1043 aaKnown RBP25.62■■□□□ 1.69
RNF40-210ENST00000566811 STYK1Q6J9G0 422 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 C2CD5Q86YS7 1000 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 MASTLQ96GX5 879 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 C9orf78Q9NZ63 289 aaPredicted RBP25.62■■□□□ 1.69
RNF40-210ENST00000566811 HDAC5Q9UQL6 1122 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 UTYO14607 1347 aa25.62■■□□□ 1.69
RNF40-210ENST00000566811 SRGNP10124 158 aa25.61■■□□□ 1.69
RNF40-210ENST00000566811 NPR1P16066 1061 aa25.61■■□□□ 1.69
RNF40-210ENST00000566811 PDE8AO60658 829 aa25.6■■□□□ 1.69
RNF40-210ENST00000566811 UBE3BQ7Z3V4 1068 aa25.6■■□□□ 1.69
RNF40-210ENST00000566811 DZIP1LQ8IYY4 767 aaKnown RBP25.6■■□□□ 1.69
RNF40-210ENST00000566811 PLA2G12BQ9BX93 195 aa25.6■■□□□ 1.69
RNF40-210ENST00000566811 PIM2Q9P1W9 311 aa25.6■■□□□ 1.69
RNF40-210ENST00000566811 CEP350Q5VT06 3117 aa25.59■■□□□ 1.69
RNF40-210ENST00000566811 DPEP1P16444 411 aa25.59■■□□□ 1.69
RNF40-210ENST00000566811 CCDC24Q8N4L8 307 aa25.59■■□□□ 1.69
RNF40-210ENST00000566811 RPGRQ92834 1020 aaKnown RBP25.59■■□□□ 1.69
RNF40-210ENST00000566811 CNKSR1Q969H4 720 aa25.59■■□□□ 1.69
RNF40-210ENST00000566811 HOXA10P31260 410 aaPredicted RBP25.58■■□□□ 1.69
RNF40-210ENST00000566811 A0A0G2JLW4 131 aa25.57■■□□□ 1.68
RNF40-210ENST00000566811 HCLS1P14317 486 aaPredicted RBP25.57■■□□□ 1.68
RNF40-210ENST00000566811 ALDH1B1P30837 517 aa25.57■■□□□ 1.68
RNF40-210ENST00000566811 CASP7P55210 303 aa25.57■■□□□ 1.68
RNF40-210ENST00000566811 SF3B3Q15393 1217 aaKnown RBP25.57■■□□□ 1.68
RNF40-210ENST00000566811 RTL9Q8NET4 1388 aa25.56■■□□□ 1.68
RNF40-210ENST00000566811 KCNA3P22001 575 aa25.56■■□□□ 1.68
RNF40-210ENST00000566811 CHRNA5P30532 468 aa25.56■■□□□ 1.68
RNF40-210ENST00000566811 CCDC152Q4G0S7 254 aa25.56■■□□□ 1.68
RNF40-210ENST00000566811 RBM17Q96I25 401 aaKnown RBP25.56■■□□□ 1.68
RNF40-210ENST00000566811 CTSWP56202 376 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms