RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
COMMD4-214ENST00000566230 ERVV-1B6SEH8 477 aa17.8■□□□□ 0.44
COMMD4-214ENST00000566230 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
COMMD4-214ENST00000566230 HOXA10P31260 410 aaPredicted RBP17.79■□□□□ 0.44
COMMD4-214ENST00000566230 FMR1Q06787 632 aaKnown RBP eCLIP17.79■□□□□ 0.44
COMMD4-214ENST00000566230 CC2D2BQ6DHV5 1058 aa17.79■□□□□ 0.44
COMMD4-214ENST00000566230 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
COMMD4-214ENST00000566230 NYXQ9GZU5 481 aa17.79■□□□□ 0.44
COMMD4-214ENST00000566230 GJA3Q9Y6H8 435 aa17.79■□□□□ 0.44
COMMD4-214ENST00000566230 MAP3K15Q6ZN16 1313 aa17.78■□□□□ 0.44
COMMD4-214ENST00000566230 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
COMMD4-214ENST00000566230 TRPM7Q96QT4 1865 aa17.78■□□□□ 0.44
COMMD4-214ENST00000566230 HSPA8P11142 646 aaKnown RBP17.78■□□□□ 0.44
COMMD4-214ENST00000566230 DDX21Q9NR30 783 aaKnown RBP eCLIP17.78■□□□□ 0.44
COMMD4-214ENST00000566230 UBN2Q6ZU65 1347 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 GPTP24298 496 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 EPS15P42566 896 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 SCNN1DP51172 638 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 EIF6P56537 245 aaKnown RBP17.77■□□□□ 0.44
COMMD4-214ENST00000566230 SUSD4Q5VX71 490 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
COMMD4-214ENST00000566230 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
COMMD4-214ENST00000566230 RIC1Q4ADV7 1423 aa17.77■□□□□ 0.44
COMMD4-214ENST00000566230 EIF4A1P60842 406 aaKnown RBP17.76■□□□□ 0.43
COMMD4-214ENST00000566230 C3orf67Q6ZVT6 689 aa17.76■□□□□ 0.43
COMMD4-214ENST00000566230 RPGRQ92834 1020 aaKnown RBP17.76■□□□□ 0.43
COMMD4-214ENST00000566230 MYL6BP14649 208 aa17.75■□□□□ 0.43
COMMD4-214ENST00000566230 ZNF34Q8IZ26 560 aa17.75■□□□□ 0.43
COMMD4-214ENST00000566230 LARGE2Q8N3Y3 721 aa17.75■□□□□ 0.43
COMMD4-214ENST00000566230 CRAMP1Q96RY5 1269 aa17.75■□□□□ 0.43
COMMD4-214ENST00000566230 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
COMMD4-214ENST00000566230 IBTKQ9P2D0 1353 aaPredicted RBP17.75■□□□□ 0.43
COMMD4-214ENST00000566230 THSD7BQ9C0I4 1608 aa17.74■□□□□ 0.43
COMMD4-214ENST00000566230 TCERG1O14776 1098 aaKnown RBP17.74■□□□□ 0.43
COMMD4-214ENST00000566230 NTSR2O95665 410 aa17.74■□□□□ 0.43
COMMD4-214ENST00000566230 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-214ENST00000566230 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
COMMD4-214ENST00000566230 GRIPAP1Q4V328 841 aa17.74■□□□□ 0.43
COMMD4-214ENST00000566230 KIF6Q6ZMV9 814 aa17.74■□□□□ 0.43
COMMD4-214ENST00000566230 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
COMMD4-214ENST00000566230 CST9Q5W186 159 aa17.73■□□□□ 0.43
COMMD4-214ENST00000566230 ABHD8Q96I13 439 aa17.73■□□□□ 0.43
COMMD4-214ENST00000566230 RBM17Q96I25 401 aaKnown RBP17.73■□□□□ 0.43
COMMD4-214ENST00000566230 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
COMMD4-214ENST00000566230 TRAF5O00463 557 aa17.72■□□□□ 0.43
COMMD4-214ENST00000566230 PPEF1O14829 653 aaPredicted RBP17.72■□□□□ 0.43
COMMD4-214ENST00000566230 CAPNS2Q96L46 248 aa17.72■□□□□ 0.43
COMMD4-214ENST00000566230 PLEKHF1Q96S99 279 aa17.72■□□□□ 0.43
COMMD4-214ENST00000566230 GIGYF2Q6Y7W6 1299 aaKnown RBP17.71■□□□□ 0.43
COMMD4-214ENST00000566230 USP50Q70EL3 339 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-214ENST00000566230 CYP4F22Q6NT55 531 aa17.7■□□□□ 0.42
COMMD4-214ENST00000566230 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
COMMD4-214ENST00000566230 NIM1KQ8IY84 436 aa17.7■□□□□ 0.42
COMMD4-214ENST00000566230 LAMB2P55268 1798 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 PPIP5K2O43314 1243 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 NFE2L2Q16236 605 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 AOC3Q16853 763 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 SLC10A5Q5PT55 438 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 GPR101Q96P66 508 aaPredicted RBP17.69■□□□□ 0.42
COMMD4-214ENST00000566230 GPRC5DQ9NZD1 345 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 ATP6V0A2Q9Y487 856 aa17.69■□□□□ 0.42
COMMD4-214ENST00000566230 ECE1P42892 770 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 CXCL9Q07325 125 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 GRM1Q13255 1194 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 PDIA6Q15084 440 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 PAXIP1Q6ZW49 1069 aaPredicted RBP17.68■□□□□ 0.42
COMMD4-214ENST00000566230 PPP1R42Q7Z4L9 355 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 TLL2Q9Y6L7 1015 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
COMMD4-214ENST00000566230 TAF1P21675 1872 aa17.67■□□□□ 0.42
COMMD4-214ENST00000566230 NEFMP07197 916 aa17.67■□□□□ 0.42
COMMD4-214ENST00000566230 PARP10Q53GL7 1025 aa17.67■□□□□ 0.42
COMMD4-214ENST00000566230 NLRP3Q96P20 1036 aa17.67■□□□□ 0.42
COMMD4-214ENST00000566230 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-214ENST00000566230 VPS33BQ9H267 617 aa17.67■□□□□ 0.42
COMMD4-214ENST00000566230 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
COMMD4-214ENST00000566230 ANKRD36CQ5JPF3 1778 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 AOC2O75106 756 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 PROSER3Q2NL68 480 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 UTP14AQ9BVJ6 771 aaKnown RBP17.66■□□□□ 0.42
COMMD4-214ENST00000566230 ZNRF3Q9ULT6 936 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 ABCC4O15439 1325 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
COMMD4-214ENST00000566230 GMPSP49915 693 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-214ENST00000566230 PGAP2Q9UHJ9 254 aa17.65■□□□□ 0.42
COMMD4-214ENST00000566230 TSKSQ9UJT2 592 aa17.65■□□□□ 0.42
COMMD4-214ENST00000566230 ANXA1P04083 346 aa17.64■□□□□ 0.41
COMMD4-214ENST00000566230 MAP2K2P36507 400 aa17.64■□□□□ 0.41
COMMD4-214ENST00000566230 FAM161AQ3B820 660 aa17.64■□□□□ 0.41
COMMD4-214ENST00000566230 SAPCD2Q86UD0 394 aa17.64■□□□□ 0.41
COMMD4-214ENST00000566230 BEGAINQ9BUH8 593 aa17.64■□□□□ 0.41
COMMD4-214ENST00000566230 GLIS2Q9BZE0 524 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-214ENST00000566230 CELF2O95319 508 aaKnown RBP17.63■□□□□ 0.41
COMMD4-214ENST00000566230 EIF2S2P20042 333 aaKnown RBP17.63■□□□□ 0.41
COMMD4-214ENST00000566230 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-214ENST00000566230 SP8Q8IXZ3 490 aa17.63■□□□□ 0.41
COMMD4-214ENST00000566230 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
COMMD4-214ENST00000566230 TMX4Q9H1E5 349 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-214ENST00000566230 POLR2AP24928 1970 aaKnown RBP17.62■□□□□ 0.41
COMMD4-214ENST00000566230 BBOX1O75936 387 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms