RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 COL13A1Q5TAT6 717 aaPredicted RBP24.77■■□□□ 1.56
ABCA3-204ENST00000566200 ANKRD36CQ5JPF3 1778 aa24.77■■□□□ 1.56
ABCA3-204ENST00000566200 IQCA1LA6NCM1 817 aa24.76■■□□□ 1.55
ABCA3-204ENST00000566200 FZD9O00144 591 aa24.76■■□□□ 1.55
ABCA3-204ENST00000566200 ANXA1P04083 346 aa24.76■■□□□ 1.55
ABCA3-204ENST00000566200 EIF2S2P20042 333 aaKnown RBP24.76■■□□□ 1.55
ABCA3-204ENST00000566200 PSMD1Q99460 953 aa24.76■■□□□ 1.55
ABCA3-204ENST00000566200 BABAM1Q9NWV8 329 aa24.75■■□□□ 1.55
ABCA3-204ENST00000566200 LDHDQ86WU2 507 aa24.74■■□□□ 1.55
ABCA3-204ENST00000566200 RPGRQ92834 1020 aaKnown RBP24.74■■□□□ 1.55
ABCA3-204ENST00000566200 LAMB2P55268 1798 aa24.74■■□□□ 1.55
ABCA3-204ENST00000566200 PASKQ96RG2 1323 aa24.73■■□□□ 1.55
ABCA3-204ENST00000566200 MYBBP1AQ9BQG0 1328 aaKnown RBP24.73■■□□□ 1.55
ABCA3-204ENST00000566200 DDX10Q13206 875 aaKnown RBP24.73■■□□□ 1.55
ABCA3-204ENST00000566200 CRAMP1Q96RY5 1269 aa24.73■■□□□ 1.55
ABCA3-204ENST00000566200 CREBZFQ9NS37 354 aa24.73■■□□□ 1.55
ABCA3-204ENST00000566200 LTBP1Q14766 1721 aa24.72■■□□□ 1.55
ABCA3-204ENST00000566200 CC2D2BQ6DHV5 1058 aa24.72■■□□□ 1.55
ABCA3-204ENST00000566200 CCDC146Q8IYE0 955 aa24.72■■□□□ 1.55
ABCA3-204ENST00000566200 RNF123Q5XPI4 1314 aa24.71■■□□□ 1.55
ABCA3-204ENST00000566200 HSPA1AP0DMV8 641 aaKnown RBP24.71■■□□□ 1.55
ABCA3-204ENST00000566200 HSPA1BP0DMV9 641 aaKnown RBP24.71■■□□□ 1.55
ABCA3-204ENST00000566200 LMOD3Q0VAK6 560 aa24.71■■□□□ 1.55
ABCA3-204ENST00000566200 KRT24Q2M2I5 525 aa24.71■■□□□ 1.55
ABCA3-204ENST00000566200 PARP10Q53GL7 1025 aa24.71■■□□□ 1.55
ABCA3-204ENST00000566200 HACL1Q9UJ83 578 aa24.71■■□□□ 1.55
ABCA3-204ENST00000566200 ITGBL1O95965 494 aaPredicted RBP24.7■■□□□ 1.54
ABCA3-204ENST00000566200 EPHX2P34913 555 aa24.7■■□□□ 1.54
ABCA3-204ENST00000566200 PPP1R42Q7Z4L9 355 aa24.7■■□□□ 1.54
ABCA3-204ENST00000566200 NECTIN2Q92692 538 aa24.7■■□□□ 1.54
ABCA3-204ENST00000566200 TRIM35Q9UPQ4 493 aa24.7■■□□□ 1.54
ABCA3-204ENST00000566200 PPEF1O14829 653 aaPredicted RBP24.69■■□□□ 1.54
ABCA3-204ENST00000566200 NEUROD2Q15784 382 aa24.69■■□□□ 1.54
ABCA3-204ENST00000566200 EAPPQ56P03 285 aaPredicted RBP24.69■■□□□ 1.54
ABCA3-204ENST00000566200 SLC10A5Q5PT55 438 aa24.69■■□□□ 1.54
ABCA3-204ENST00000566200 GPC2Q8N158 579 aa24.69■■□□□ 1.54
ABCA3-204ENST00000566200 RBM17Q96I25 401 aaKnown RBP24.69■■□□□ 1.54
ABCA3-204ENST00000566200 MKRN1Q9UHC7 482 aaKnown RBP24.69■■□□□ 1.54
ABCA3-204ENST00000566200 CHL1O00533 1208 aa24.68■■□□□ 1.54
ABCA3-204ENST00000566200 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
ABCA3-204ENST00000566200 COPS6Q7L5N1 327 aa24.68■■□□□ 1.54
ABCA3-204ENST00000566200 XAGE3Q8WTP9 111 aa24.67■■□□□ 1.54
ABCA3-204ENST00000566200 JDP2Q8WYK2 163 aa24.67■■□□□ 1.54
ABCA3-204ENST00000566200 NLRP3Q96P20 1036 aa24.67■■□□□ 1.54
ABCA3-204ENST00000566200 UTP14AQ9BVJ6 771 aaKnown RBP24.67■■□□□ 1.54
ABCA3-204ENST00000566200 AIMP1Q12904 312 aaKnown RBP24.65■■□□□ 1.54
ABCA3-204ENST00000566200 GRIPAP1Q4V328 841 aa24.65■■□□□ 1.54
ABCA3-204ENST00000566200 NLRP10Q86W26 655 aa24.65■■□□□ 1.54
ABCA3-204ENST00000566200 RUNDC1Q96C34 613 aa24.65■■□□□ 1.54
ABCA3-204ENST00000566200 DDX21Q9NR30 783 aaKnown RBP eCLIP24.65■■□□□ 1.54
ABCA3-204ENST00000566200 CNTNAP1P78357 1384 aa24.65■■□□□ 1.54
ABCA3-204ENST00000566200 ABCC4O15439 1325 aa24.64■■□□□ 1.54
ABCA3-204ENST00000566200 TAF1P21675 1872 aa24.64■■□□□ 1.53
ABCA3-204ENST00000566200 EIF6P56537 245 aaKnown RBP24.63■■□□□ 1.53
ABCA3-204ENST00000566200 PNMA8AQ86V59 439 aaPredicted RBP24.63■■□□□ 1.53
ABCA3-204ENST00000566200 LARGE2Q8N3Y3 721 aa24.63■■□□□ 1.53
ABCA3-204ENST00000566200 ADAMTS8Q9UP79 889 aa24.63■■□□□ 1.53
ABCA3-204ENST00000566200 CLEC11AQ9Y240 323 aa24.63■■□□□ 1.53
ABCA3-204ENST00000566200 ATP6V0A2Q9Y487 856 aa24.63■■□□□ 1.53
ABCA3-204ENST00000566200 GJA3Q9Y6H8 435 aa24.63■■□□□ 1.53
ABCA3-204ENST00000566200 DDX60Q8IY21 1712 aaKnown RBP24.62■■□□□ 1.53
ABCA3-204ENST00000566200 SCNN1DP51172 638 aa24.62■■□□□ 1.53
ABCA3-204ENST00000566200 TCIRG1Q13488 830 aa24.62■■□□□ 1.53
ABCA3-204ENST00000566200 MAP1SQ66K74 1059 aaPredicted RBP24.62■■□□□ 1.53
ABCA3-204ENST00000566200 CHPF2Q9P2E5 772 aa24.62■■□□□ 1.53
ABCA3-204ENST00000566200 LAS1LQ9Y4W2 734 aaKnown RBP24.62■■□□□ 1.53
ABCA3-204ENST00000566200 TMEM88BA6NKF7 163 aa24.61■■□□□ 1.53
ABCA3-204ENST00000566200 HCLS1P14317 486 aaPredicted RBP24.61■■□□□ 1.53
ABCA3-204ENST00000566200 HSP90AB3PQ58FF7 597 aa24.61■■□□□ 1.53
ABCA3-204ENST00000566200 WDR43Q15061 677 aaKnown RBP eCLIP24.6■■□□□ 1.53
ABCA3-204ENST00000566200 CNTROBQ8N137 903 aa24.6■■□□□ 1.53
ABCA3-204ENST00000566200 EPS15P42566 896 aa24.59■■□□□ 1.53
ABCA3-204ENST00000566200 AOC3Q16853 763 aa24.59■■□□□ 1.53
ABCA3-204ENST00000566200 TNS4Q8IZW8 715 aa24.59■■□□□ 1.53
ABCA3-204ENST00000566200 LRRC37AA6NMS7 1700 aa24.58■■□□□ 1.53
ABCA3-204ENST00000566200 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
ABCA3-204ENST00000566200 NIM1KQ8IY84 436 aa24.58■■□□□ 1.53
ABCA3-204ENST00000566200 ZNF428Q96B54 188 aa24.58■■□□□ 1.53
ABCA3-204ENST00000566200 RTFDC1Q9BY42 306 aaPredicted RBP24.58■■□□□ 1.53
ABCA3-204ENST00000566200 TRMT112Q9UI30 125 aaKnown RBP24.58■■□□□ 1.53
ABCA3-204ENST00000566200 VEGFBP49765 207 aa24.57■■□□□ 1.52
ABCA3-204ENST00000566200 HDGFL1Q5TGJ6 251 aa24.57■■□□□ 1.52
ABCA3-204ENST00000566200 DUOX1Q9NRD9 1551 aa24.57■■□□□ 1.52
ABCA3-204ENST00000566200 SH3TC1Q8TE82 1336 aa24.57■■□□□ 1.52
ABCA3-204ENST00000566200 COL4A1P02462 1669 aa24.56■■□□□ 1.52
ABCA3-204ENST00000566200 BBOX1O75936 387 aa24.56■■□□□ 1.52
ABCA3-204ENST00000566200 SP8Q8IXZ3 490 aa24.56■■□□□ 1.52
ABCA3-204ENST00000566200 HOXB7P09629 217 aa24.55■■□□□ 1.52
ABCA3-204ENST00000566200 LMOD1P29536 600 aaPredicted RBP24.55■■□□□ 1.52
ABCA3-204ENST00000566200 PLBD2Q8NHP8 589 aa24.55■■□□□ 1.52
ABCA3-204ENST00000566200 VPS33BQ9H267 617 aa24.55■■□□□ 1.52
ABCA3-204ENST00000566200 PRKRIP1Q9H875 184 aaPredicted RBP24.55■■□□□ 1.52
ABCA3-204ENST00000566200 FMR1Q06787 632 aaKnown RBP eCLIP24.54■■□□□ 1.52
ABCA3-204ENST00000566200 CFAP44Q96MT7 982 aa24.54■■□□□ 1.52
ABCA3-204ENST00000566200 ISCA1Q9BUE6 129 aa24.54■■□□□ 1.52
ABCA3-204ENST00000566200 FOXN1O15353 648 aa24.53■■□□□ 1.52
ABCA3-204ENST00000566200 CXCL9Q07325 125 aa24.53■■□□□ 1.52
ABCA3-204ENST00000566200 GRAPQ13588 217 aa24.53■■□□□ 1.52
ABCA3-204ENST00000566200 DPP8Q6V1X1 898 aaPredicted RBP24.53■■□□□ 1.52
ABCA3-204ENST00000566200 ANKRD13DQ6ZTN6 518 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms