RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 CLEC11AQ9Y240 323 aa15.32■□□□□ 0.04
NSMCE1-209ENST00000565384 TMEM88BA6NKF7 163 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 SUSD4Q5VX71 490 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 CC2D2BQ6DHV5 1058 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 GPC2Q8N158 579 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 JDP2Q8WYK2 163 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 MAPK8IP3Q9UPT6 1336 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 COL4A5P29400 1685 aa15.31■□□□□ 0.04
NSMCE1-209ENST00000565384 PCNTO95613 3336 aa15.3■□□□□ 0.04
NSMCE1-209ENST00000565384 HOXA10P31260 410 aaPredicted RBP15.3■□□□□ 0.04
NSMCE1-209ENST00000565384 ERBB4Q15303 1308 aa15.3■□□□□ 0.04
NSMCE1-209ENST00000565384 FOXN1O15353 648 aa15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 NTSR2O95665 410 aa15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 VEGFBP49765 207 aa15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 EIF6P56537 245 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 ZNF34Q8IZ26 560 aa15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 RBM17Q96I25 401 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 PNNQ9H307 717 aaKnown RBP15.29■□□□□ 0.04
NSMCE1-209ENST00000565384 PPEF1O14829 653 aaPredicted RBP15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 GRIPAP1Q4V328 841 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 GIGYF2Q6Y7W6 1299 aaKnown RBP15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 SLC51AQ86UW1 340 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 CNTROBQ8N137 903 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 CRAMP1Q96RY5 1269 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 TSPYL4Q9UJ04 414 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 GJA3Q9Y6H8 435 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 LTBP1Q14766 1721 aa15.28■□□□□ 0.04
NSMCE1-209ENST00000565384 C3orf67Q6ZVT6 689 aa15.27■□□□□ 0.04
NSMCE1-209ENST00000565384 PPP1R42Q7Z4L9 355 aa15.27■□□□□ 0.04
NSMCE1-209ENST00000565384 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.04
NSMCE1-209ENST00000565384 TCERG1O14776 1098 aaKnown RBP15.26■□□□□ 0.03
NSMCE1-209ENST00000565384 LMOD1P29536 600 aaPredicted RBP15.26■□□□□ 0.03
NSMCE1-209ENST00000565384 PARP10Q53GL7 1025 aa15.26■□□□□ 0.03
NSMCE1-209ENST00000565384 LRP10Q7Z4F1 713 aa15.26■□□□□ 0.03
NSMCE1-209ENST00000565384 AIDAQ96BJ3 306 aa15.26■□□□□ 0.03
NSMCE1-209ENST00000565384 RASSF10A6NK89 507 aa15.25■□□□□ 0.03
NSMCE1-209ENST00000565384 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
NSMCE1-209ENST00000565384 SCNN1DP51172 638 aa15.25■□□□□ 0.03
NSMCE1-209ENST00000565384 NLRP3Q96P20 1036 aa15.25■□□□□ 0.03
NSMCE1-209ENST00000565384 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
NSMCE1-209ENST00000565384 CTCFP49711 727 aaPredicted RBP15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 RIPK4P57078 832 aa15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 PDIA6Q15084 440 aa15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 NIM1KQ8IY84 436 aa15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 UTP14AQ9BVJ6 771 aaKnown RBP15.24■□□□□ 0.03
NSMCE1-209ENST00000565384 PPIP5K2O43314 1243 aa15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 ANXA1P04083 346 aa15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 ZEB1P37275 1124 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 EPS15P42566 896 aa15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 TMX4Q9H1E5 349 aaPredicted RBP15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 DDX21Q9NR30 783 aaKnown RBP eCLIP15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 WBP1LQ9NX94 342 aa15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 ABT1Q9ULW3 272 aaKnown RBP15.23■□□□□ 0.03
NSMCE1-209ENST00000565384 ABCC4O15439 1325 aa15.22■□□□□ 0.03
NSMCE1-209ENST00000565384 AOC3Q16853 763 aa15.22■□□□□ 0.03
NSMCE1-209ENST00000565384 SLC10A5Q5PT55 438 aa15.22■□□□□ 0.03
NSMCE1-209ENST00000565384 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
NSMCE1-209ENST00000565384 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
NSMCE1-209ENST00000565384 WDR33Q9C0J8 1336 aaKnown RBP15.21■□□□□ 0.03
NSMCE1-209ENST00000565384 LMOD3Q0VAK6 560 aa15.21■□□□□ 0.03
NSMCE1-209ENST00000565384 USP50Q70EL3 339 aaPredicted RBP15.21■□□□□ 0.03
NSMCE1-209ENST00000565384 ANKRD36CQ5JPF3 1778 aa15.21■□□□□ 0.02
NSMCE1-209ENST00000565384 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 LBX1P52954 281 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 FMR1Q06787 632 aaKnown RBP eCLIP15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 HSP90AB3PQ58FF7 597 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 SUPT20HQ8NEM7 779 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 NECTIN2Q92692 538 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 VPS33BQ9H267 617 aa15.2■□□□□ 0.02
NSMCE1-209ENST00000565384 LAMB2P55268 1798 aa15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 RTFDC1Q9BY42 306 aaPredicted RBP15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 GPRC5DQ9NZD1 345 aa15.19■□□□□ 0.02
NSMCE1-209ENST00000565384 TRAF5O00463 557 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 BBOX1O75936 387 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 HSPA8P11142 646 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 HCLS1P14317 486 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 MAP2K1Q02750 393 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 CXCL9Q07325 125 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 RALBP1Q15311 655 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 DPP8Q6V1X1 898 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 PAXIP1Q6ZW49 1069 aaPredicted RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 SP8Q8IXZ3 490 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 ZNRF3Q9ULT6 936 aa15.18■□□□□ 0.02
NSMCE1-209ENST00000565384 TCIRG1Q13488 830 aa15.17■□□□□ 0.02
NSMCE1-209ENST00000565384 MPNDQ8N594 471 aa15.17■□□□□ 0.02
NSMCE1-209ENST00000565384 TRMT112Q9UI30 125 aaKnown RBP15.17■□□□□ 0.02
NSMCE1-209ENST00000565384 SH3TC1Q8TE82 1336 aa15.17■□□□□ 0.02
NSMCE1-209ENST00000565384 ECE1P42892 770 aa15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
NSMCE1-209ENST00000565384 KIAA2012Q0VF49 1180 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms