RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 RAPGEF4Q8WZA2 1011 aa14.68□□□□□ -0.06
COMMD4-209ENST00000564068 PA2G4Q9UQ80 394 aaKnown RBP14.67□□□□□ -0.06
COMMD4-209ENST00000564068 SNX14Q9Y5W7 946 aa14.67□□□□□ -0.06
COMMD4-209ENST00000564068 IBTKQ9P2D0 1353 aaPredicted RBP14.67□□□□□ -0.06
COMMD4-209ENST00000564068 EIF2AK4Q9P2K8 1649 aaKnown RBP14.67□□□□□ -0.06
COMMD4-209ENST00000564068 PNMA6EA0A0J9YXQ4 647 aa14.67□□□□□ -0.06
COMMD4-209ENST00000564068 PTPRTO14522 1441 aa14.67□□□□□ -0.06
COMMD4-209ENST00000564068 EPB41L2O43491 1005 aaKnown RBP14.66□□□□□ -0.06
COMMD4-209ENST00000564068 ARFGAP3Q9NP61 516 aa14.65□□□□□ -0.06
COMMD4-209ENST00000564068 AMOTL2Q9Y2J4 779 aa14.65□□□□□ -0.06
COMMD4-209ENST00000564068 ZNF75DP51815 510 aa14.65□□□□□ -0.06
COMMD4-209ENST00000564068 EIF4A2Q14240 407 aaKnown RBP14.65□□□□□ -0.06
COMMD4-209ENST00000564068 LARP1Q6PKG0 1096 aaKnown RBP14.65□□□□□ -0.06
COMMD4-209ENST00000564068 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
COMMD4-209ENST00000564068 ZSCAN16Q9H4T2 348 aaPredicted RBP14.65□□□□□ -0.06
COMMD4-209ENST00000564068 YEATS2Q9ULM3 1422 aa14.65□□□□□ -0.06
COMMD4-209ENST00000564068 UBASH3AP57075 661 aa14.65□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC82Q8N4S0 544 aa14.65□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC85AQ96PX6 553 aaPredicted RBP14.65□□□□□ -0.07
COMMD4-209ENST00000564068 IFNKQ9P0W0 207 aa14.65□□□□□ -0.07
COMMD4-209ENST00000564068 U3KPZ7 1027 aaPredicted RBP14.65□□□□□ -0.07
COMMD4-209ENST00000564068 CFAP65Q6ZU64 1925 aaKnown RBP14.65□□□□□ -0.07
COMMD4-209ENST00000564068 MARCH6O60337 910 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 VPS53Q5VIR6 699 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 CREB3L3Q68CJ9 461 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC150Q8NCX0 1101 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 LIG1P18858 919 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 DHX37Q8IY37 1157 aaKnown RBP14.64□□□□□ -0.07
COMMD4-209ENST00000564068 C10orf67Q8IYJ2 551 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 RNF216Q9NWF9 866 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-209ENST00000564068 KIF5CO60282 957 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 GABPB1Q06547 395 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-209ENST00000564068 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
COMMD4-209ENST00000564068 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
COMMD4-209ENST00000564068 IBSPP21815 317 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-209ENST00000564068 RDXP35241 583 aaKnown RBP14.63□□□□□ -0.07
COMMD4-209ENST00000564068 NMIQ13287 307 aaPredicted RBP14.63□□□□□ -0.07
COMMD4-209ENST00000564068 MPRIPQ6WCQ1 1025 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 ABCC4O15439 1325 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.63□□□□□ -0.07
COMMD4-209ENST00000564068 ABCA8O94911 1581 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 PDLIM2Q96JY6 352 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 KIF2CQ99661 725 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 DACH1Q9UI36 760 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 SGSM2O43147 1006 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 HAND2P61296 217 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 Q6ZUG5 572 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 RUFY3Q7L099 469 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 MAP3K2Q9Y2U5 619 aa14.63□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 ZSCAN25Q6NSZ9 544 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 CNNM3Q8NE01 707 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 PLEKHF1Q96S99 279 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 SOS1Q07889 1333 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-209ENST00000564068 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 CLSTN1O94985 981 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 TTC39AQ5SRH9 613 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 DDX46Q7L014 1031 aaKnown RBP14.62□□□□□ -0.07
COMMD4-209ENST00000564068 CDC37L1Q7L3B6 337 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 ORC3Q9UBD5 711 aaPredicted RBP14.62□□□□□ -0.07
COMMD4-209ENST00000564068 MTMR7Q9Y216 660 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 PHACTR2O75167 634 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 MTHFSDQ2M296 383 aaKnown RBP14.62□□□□□ -0.07
COMMD4-209ENST00000564068 TXLNBQ8N3L3 684 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 CRACR2AQ9BSW2 395 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 HSPA4P34932 840 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 KIAA1524Q8TCG1 905 aa14.62□□□□□ -0.07
COMMD4-209ENST00000564068 MRPS27Q92552 414 aaKnown RBP14.62□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC191Q8NCU4 936 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 CCDC47Q96A33 483 aaKnown RBP14.61□□□□□ -0.07
COMMD4-209ENST00000564068 PHAXQ9H814 394 aaKnown RBP14.61□□□□□ -0.07
COMMD4-209ENST00000564068 GPATCH11Q8N954 259 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 RAI14Q9P0K7 980 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 CHPF2Q9P2E5 772 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 CTNNA3Q9UI47 895 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 KIAA0754O94854 1291 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
COMMD4-209ENST00000564068 CHST3Q7LGC8 479 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 CENPHQ9H3R5 247 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 ATP10AO60312 1499 aa14.61□□□□□ -0.07
COMMD4-209ENST00000564068 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 XBP1P17861 261 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 IMMTQ16891 758 aaKnown RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 TRIM22Q8IYM9 498 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 GOLIM4O00461 696 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 SART3Q15020 963 aaKnown RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 ATP2B3Q16720 1220 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 LEO1Q8WVC0 666 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 UTP14AQ9BVJ6 771 aaKnown RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 DBF4Q9UBU7 674 aaPredicted RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 RAD50Q92878 1312 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 A0A1B0GVL5 298 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 PUS7Q96PZ0 661 aaKnown RBP14.6□□□□□ -0.07
COMMD4-209ENST00000564068 CEP126Q9P2H0 1117 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 RSPH14Q9UHP6 348 aa14.6□□□□□ -0.07
COMMD4-209ENST00000564068 CAPN2P17655 700 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms