RNA–Protein interactions for RNA: ENST00000563679.5

PDXDC1-210, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2 BASIC

Gene PDXDC1, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-210ENST00000563679 MYD88Q99836 296 aa11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 DIAPH3Q9NSV4 1193 aa11.98□□□□□ -0.49
PDXDC1-210ENST00000563679 CABP4P57796 275 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 DDX49Q9Y6V7 483 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 RPAP1Q9BWH6 1393 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 NECTIN1Q15223 517 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 KIAA1211Q6ZU35 1233 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 PANK2Q9BZ23 570 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 CCDC171Q6TFL3 1326 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 PLCH1Q4KWH8 1693 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 MYL6BP14649 208 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 CWC27Q6UX04 472 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 CARD10Q9BWT7 1032 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
PDXDC1-210ENST00000563679 SPEF2Q9C093 1822 aa11.96□□□□□ -0.49
PDXDC1-210ENST00000563679 VPS53Q5VIR6 699 aa11.96□□□□□ -0.49
PDXDC1-210ENST00000563679 UPF3BQ9BZI7 483 aaKnown RBP11.96□□□□□ -0.49
PDXDC1-210ENST00000563679 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
PDXDC1-210ENST00000563679 LRP6O75581 1613 aa11.96□□□□□ -0.49
PDXDC1-210ENST00000563679 H7C1W4 665 aa11.96□□□□□ -0.5
PDXDC1-210ENST00000563679 PTPN12Q05209 780 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-210ENST00000563679 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.5
PDXDC1-210ENST00000563679 MAP4K1Q92918 833 aa11.96□□□□□ -0.5
PDXDC1-210ENST00000563679 ATP5JP18859 108 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 PTH1RQ03431 593 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 TMEM87AQ8NBN3 555 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 LIMCH1Q9UPQ0 1083 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 TSGA10IPQ3SY00 556 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 RUFY3Q7L099 469 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 GPT2Q8TD30 523 aa11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 WDR33Q9C0J8 1336 aaKnown RBP11.95□□□□□ -0.5
PDXDC1-210ENST00000563679 AK2P54819 239 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 MBD3O95983 291 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 WNK3Q9BYP7 1800 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 ZSCAN23Q3MJ62 389 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 KLHL34Q8N239 644 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 ZSCAN31Q96LW9 406 aaPredicted RBP11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 PPP1R9BQ96SB3 815 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 GPR108Q9NPR9 543 aa11.94□□□□□ -0.5
PDXDC1-210ENST00000563679 FOXO4P98177 505 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 TNNI3KQ59H18 835 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 USPL1Q5W0Q7 1092 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 SH2B1Q9NRF2 756 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 SLAIN2Q9P270 581 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 FPGT-TNNI3KV9GXZ4 949 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 CCDC8Q9H0W5 538 aaPredicted RBP11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
PDXDC1-210ENST00000563679 IL2RBP14784 551 aa11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 HSPA2P54652 639 aa11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 DBNLQ9UJU6 430 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 ITGB4P16144 1822 aa11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 PRPF40AO75400 957 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 ATG3Q9NT62 314 aa11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 RBM8AQ9Y5S9 174 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
PDXDC1-210ENST00000563679 UBE3BQ7Z3V4 1068 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 FAM227BQ96M60 508 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 HMG20BQ9P0W2 317 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 DISP2A7MBM2 1401 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 PALLDQ8WX93 1383 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 A0A087WZG4 1122 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 A0A0D9SFI3 127 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 PDIA4P13667 645 aaKnown RBP11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 CASTP20810 708 aaKnown RBP11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 SLC27A2O14975 620 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 ADCK5Q3MIX3 580 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 TOM1L2Q6ZVM7 507 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 CCDC191Q8NCU4 936 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 HAUS7Q99871 368 aa11.91□□□□□ -0.5
PDXDC1-210ENST00000563679 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 TFCP2Q12800 502 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 SIL1Q9H173 461 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 PDRG1Q9NUG6 133 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 ZNF609O15014 1411 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 ZKSCAN1P17029 563 aaPredicted RBP11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 PSMA5P28066 241 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 CCDC173Q0VFZ6 552 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 JAKMIP1Q96N16 626 aaKnown RBP11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 RRAGDQ9NQL2 400 aaPredicted RBP11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 CWC25Q9NXE8 425 aaPredicted RBP11.9□□□□□ -0.5
PDXDC1-210ENST00000563679 CIAO1O76071 339 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 ZSCAN22P10073 491 aaPredicted RBP11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
PDXDC1-210ENST00000563679 VSIG10Q8N0Z9 540 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms