RNA–Protein interactions for RNA: ENST00000562927.2

ABCD1P3-201, Transcript of ATP binding cassette subfamily D member 1 pseudogene 3, humanhuman

BASIC

Gene ABCD1P3, Length 605 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P3-201ENST00000562927 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
ABCD1P3-201ENST00000562927 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
ABCD1P3-201ENST00000562927 DICER1Q9UPY3 1922 aaKnown RBP16.55■□□□□ 0.24
ABCD1P3-201ENST00000562927 FZD9O00144 591 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 POTEJP0CG39 1038 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 GRIPAP1Q4V328 841 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 SLC10A5Q5PT55 438 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 RUNDC1Q96C34 613 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
ABCD1P3-201ENST00000562927 ZNF541Q9H0D2 1346 aa16.53■□□□□ 0.24
ABCD1P3-201ENST00000562927 ANXA1P04083 346 aa16.53■□□□□ 0.24
ABCD1P3-201ENST00000562927 RBM17Q96I25 401 aaKnown RBP16.53■□□□□ 0.24
ABCD1P3-201ENST00000562927 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 C3orf67Q6ZVT6 689 aa16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 COPS6Q7L5N1 327 aa16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 LDHDQ86WU2 507 aa16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 NLRP3Q96P20 1036 aa16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
ABCD1P3-201ENST00000562927 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 CACNA1SQ13698 1873 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 GPC2Q8N158 579 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 XAGE3Q8WTP9 111 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 DDX21Q9NR30 783 aaKnown RBP eCLIP16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 NUP98P52948 1817 aa16.51■□□□□ 0.23
ABCD1P3-201ENST00000562927 PPEF1O14829 653 aaPredicted RBP16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 AIMP1Q12904 312 aaKnown RBP16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 KRT24Q2M2I5 525 aa16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 CREBZFQ9NS37 354 aa16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
ABCD1P3-201ENST00000562927 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
ABCD1P3-201ENST00000562927 LAS1LQ9Y4W2 734 aaKnown RBP16.49■□□□□ 0.23
ABCD1P3-201ENST00000562927 PASKQ96RG2 1323 aa16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 EPHX2P34913 555 aa16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 TCIRG1Q13488 830 aa16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 SLC51AQ86UW1 340 aa16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 PNMA8AQ86V59 439 aaPredicted RBP16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 PRKRIP1Q9H875 184 aaPredicted RBP16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 ATP6V0A2Q9Y487 856 aa16.48■□□□□ 0.23
ABCD1P3-201ENST00000562927 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 ITGBL1O95965 494 aaPredicted RBP16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 HOXB7P09629 217 aa16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 LARGE2Q8N3Y3 721 aa16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 CHPF2Q9P2E5 772 aa16.47■□□□□ 0.23
ABCD1P3-201ENST00000562927 BBOX1O75936 387 aa16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 HCLS1P14317 486 aaPredicted RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 EIF6P56537 245 aaKnown RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 COL13A1Q5TAT6 717 aaPredicted RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 HDGFL1Q5TGJ6 251 aa16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 VPS33BQ9H267 617 aa16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 DBF4Q9UBU7 674 aaPredicted RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 COL4A5P29400 1685 aa16.46■□□□□ 0.23
ABCD1P3-201ENST00000562927 ABCC4O15439 1325 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 SCN4AP35499 1836 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 CLEC11AQ9Y240 323 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 GJA3Q9Y6H8 435 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
ABCD1P3-201ENST00000562927 ZNF853P0CG23 659 aa16.44■□□□□ 0.22
ABCD1P3-201ENST00000562927 ANKRD13DQ6ZTN6 518 aa16.44■□□□□ 0.22
ABCD1P3-201ENST00000562927 SP8Q8IXZ3 490 aa16.44■□□□□ 0.22
ABCD1P3-201ENST00000562927 RTFDC1Q9BY42 306 aaPredicted RBP16.44■□□□□ 0.22
ABCD1P3-201ENST00000562927 MKRN1Q9UHC7 482 aaKnown RBP16.44■□□□□ 0.22
ABCD1P3-201ENST00000562927 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 HSPA1AP0DMV8 641 aaKnown RBP16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 HSPA1BP0DMV9 641 aaKnown RBP16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 CNTROBQ8N137 903 aa16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 HYPKQ9NX55 129 aa16.43■□□□□ 0.22
ABCD1P3-201ENST00000562927 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 SCNN1DP51172 638 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 AOC3Q16853 763 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 MAP1SQ66K74 1059 aaPredicted RBP16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 NIM1KQ8IY84 436 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 SUPT20HQ8NEM7 779 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 ISCA1Q9BUE6 129 aa16.42■□□□□ 0.22
ABCD1P3-201ENST00000562927 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 CNTNAP1P78357 1384 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 APAF1O14727 1248 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 LMOD1P29536 600 aaPredicted RBP16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 EPS15P42566 896 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 GRAPQ13588 217 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 DPP8Q6V1X1 898 aaPredicted RBP16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 GRAPLQ8TC17 118 aaPredicted RBP16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 ZNRF3Q9ULT6 936 aa16.41■□□□□ 0.22
ABCD1P3-201ENST00000562927 CALD1Q05682 793 aaKnown RBP16.4■□□□□ 0.22
ABCD1P3-201ENST00000562927 TRIM28Q13263 835 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms