RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 TRIM28Q13263 835 aaKnown RBP15.39■□□□□ 0.05
AC055717.2-201ENST00000561864 DNAJC10Q8IXB1 793 aa15.39■□□□□ 0.05
AC055717.2-201ENST00000561864 ISCA1Q9BUE6 129 aa15.39■□□□□ 0.05
AC055717.2-201ENST00000561864 RREB1Q92766 1687 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 FOXO4P98177 505 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 MEX3CQ5U5Q3 659 aaKnown RBP15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 EVI5LQ96CN4 794 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 ZBTB3Q9H5J0 574 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 ANO2Q9NQ90 1003 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 SPATA31A5Q5VU36 1347 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 SPATA31A7Q8IWB4 1347 aa15.38■□□□□ 0.05
AC055717.2-201ENST00000561864 HIP1O00291 1037 aa15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 SGSM2O43147 1006 aa15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 CD2BP2O95400 341 aaKnown RBP15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 PTPN12Q05209 780 aaKnown RBP15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 TCIRG1Q13488 830 aa15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 BARGINQ6ZT62 677 aa15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 EAF2Q96CJ1 260 aaPredicted RBP15.37■□□□□ 0.05
AC055717.2-201ENST00000561864 MCM2P49736 904 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 DDB1Q16531 1140 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 SPRYD3Q8NCJ5 442 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 SIL1Q9H173 461 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 MAP3K15Q6ZN16 1313 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 RAD50Q92878 1312 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 RFX7Q2KHR2 1363 aa15.36■□□□□ 0.05
AC055717.2-201ENST00000561864 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 HSP90AA1P07900 732 aaKnown RBP15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 CYP19A1P11511 503 aaPredicted RBP15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 LMBR1LQ6UX01 489 aa15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 DIAPH3Q9NSV4 1193 aa15.35■□□□□ 0.05
AC055717.2-201ENST00000561864 TNNI3KQ59H18 835 aa15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 JARID2Q92833 1246 aaPredicted RBP15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 NGLY1Q96IV0 654 aa15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 GPR108Q9NPR9 543 aa15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 FPGT-TNNI3KV9GXZ4 949 aa15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 ZNF831Q5JPB2 1677 aa15.34■□□□□ 0.05
AC055717.2-201ENST00000561864 CIAO1O76071 339 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 PCCAP05165 728 aaPredicted RBP15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 HSPA4P34932 840 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 KIAA1211Q6ZU35 1233 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 PLA2G12BQ9BX93 195 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
AC055717.2-201ENST00000561864 ATP5JP18859 108 aa15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 DEKP35659 375 aaKnown RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 IL6STP40189 918 aaPredicted RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 PRIM1P49642 420 aaKnown RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 TFCP2Q12800 502 aa15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 GIGYF2Q6Y7W6 1299 aaKnown RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 SLC4A9Q96Q91 983 aa15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 LSG1Q9H089 658 aaKnown RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 SNRKQ9NRH2 765 aa15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
AC055717.2-201ENST00000561864 ERVV-1B6SEH8 477 aa15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 SYTL4Q96C24 671 aaPredicted RBP15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 ZNF609O15014 1411 aa15.31■□□□□ 0.04
AC055717.2-201ENST00000561864 RAB3GAP1Q15042 981 aa15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 SPEF2Q9C093 1822 aa15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 IL25Q9H293 177 aa15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 CWC22Q9HCG8 908 aaKnown RBP15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 DBNLQ9UJU6 430 aaKnown RBP15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 CHMP3Q9Y3E7 222 aa15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 ZNF330Q9Y3S2 320 aaPredicted RBP15.3■□□□□ 0.04
AC055717.2-201ENST00000561864 AFF2P51816 1311 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 EYA2O00167 538 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 PTMSP20962 102 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 MCM4P33991 863 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 NEK4P51957 841 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 CWC27Q6UX04 472 aaKnown RBP15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 ATG9AQ7Z3C6 839 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 MARCH10Q8NA82 808 aaPredicted RBP15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 RGS17Q9UGC6 210 aaPredicted RBP15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
AC055717.2-201ENST00000561864 VPS72Q15906 364 aa15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 NLRP10Q86W26 655 aa15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 FNBP4Q8N3X1 1017 aaPredicted RBP15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 GBP4Q96PP9 640 aa15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 FSD1Q9BTV5 496 aa15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 NUP98P52948 1817 aa15.28■□□□□ 0.04
AC055717.2-201ENST00000561864 MED23Q9ULK4 1368 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 CCDC171Q6TFL3 1326 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 CSF1RP07333 972 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 CCDC57Q2TAC2 916 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 KCNB2Q92953 911 aa15.27■□□□□ 0.04
AC055717.2-201ENST00000561864 HAUS7Q99871 368 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms