RNA–Protein interactions for RNA: ENST00000561278.1

SHF-211, Transcript of Src homology 2 domain containing F, humanhuman

TSL 4

Gene SHF, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-211ENST00000561278 RIC1Q4ADV7 1423 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 APAF1O14727 1248 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
SHF-211ENST00000561278 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 RTKN2Q8IZC4 609 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 C7orf43Q8WVR3 580 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
SHF-211ENST00000561278 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
SHF-211ENST00000561278 DICER1Q9UPY3 1922 aaKnown RBP16.27■□□□□ 0.2
SHF-211ENST00000561278 RBM17Q96I25 401 aaKnown RBP16.27■□□□□ 0.2
SHF-211ENST00000561278 CFAP44Q96MT7 982 aa16.27■□□□□ 0.2
SHF-211ENST00000561278 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.2
SHF-211ENST00000561278 DDX21Q9NR30 783 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHF-211ENST00000561278 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
SHF-211ENST00000561278 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
SHF-211ENST00000561278 DDNO94850 711 aaPredicted RBP16.26■□□□□ 0.19
SHF-211ENST00000561278 HSP90AB3PQ58FF7 597 aa16.26■□□□□ 0.19
SHF-211ENST00000561278 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
SHF-211ENST00000561278 PPEF1O14829 653 aaPredicted RBP16.25■□□□□ 0.19
SHF-211ENST00000561278 HOXB7P09629 217 aa16.25■□□□□ 0.19
SHF-211ENST00000561278 HTRA3P83110 453 aa16.25■□□□□ 0.19
SHF-211ENST00000561278 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
SHF-211ENST00000561278 ZNF428Q96B54 188 aa16.25■□□□□ 0.19
SHF-211ENST00000561278 NLRP3Q96P20 1036 aa16.25■□□□□ 0.19
SHF-211ENST00000561278 IARSP41252 1262 aaKnown RBP16.24■□□□□ 0.19
SHF-211ENST00000561278 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
SHF-211ENST00000561278 C3orf67Q6ZVT6 689 aa16.24■□□□□ 0.19
SHF-211ENST00000561278 SYNE4Q8N205 404 aa16.24■□□□□ 0.19
SHF-211ENST00000561278 DBF4Q9UBU7 674 aaPredicted RBP16.24■□□□□ 0.19
SHF-211ENST00000561278 POTECB2RU33 542 aa16.23■□□□□ 0.19
SHF-211ENST00000561278 HOXA10P31260 410 aaPredicted RBP16.23■□□□□ 0.19
SHF-211ENST00000561278 NLRP10Q86W26 655 aa16.23■□□□□ 0.19
SHF-211ENST00000561278 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
SHF-211ENST00000561278 TMX4Q9H1E5 349 aaPredicted RBP16.23■□□□□ 0.19
SHF-211ENST00000561278 IFT57Q9NWB7 429 aa16.23■□□□□ 0.19
SHF-211ENST00000561278 TRMT112Q9UI30 125 aaKnown RBP16.23■□□□□ 0.19
SHF-211ENST00000561278 RNF123Q5XPI4 1314 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 GNAI1P63096 354 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 TCIRG1Q13488 830 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 CC2D2BQ6DHV5 1058 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 CRAMP1Q96RY5 1269 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 PSMD1Q99460 953 aa16.22■□□□□ 0.19
SHF-211ENST00000561278 ELL2O00472 640 aaPredicted RBP16.21■□□□□ 0.19
SHF-211ENST00000561278 HCLS1P14317 486 aaPredicted RBP16.21■□□□□ 0.19
SHF-211ENST00000561278 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
SHF-211ENST00000561278 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
SHF-211ENST00000561278 HYPKQ9NX55 129 aa16.21■□□□□ 0.19
SHF-211ENST00000561278 ABCC4O15439 1325 aa16.2■□□□□ 0.18
SHF-211ENST00000561278 SH3TC1Q8TE82 1336 aa16.2■□□□□ 0.18
SHF-211ENST00000561278 CCDC184Q52MB2 194 aa16.2■□□□□ 0.18
SHF-211ENST00000561278 ANKRD13DQ6ZTN6 518 aa16.2■□□□□ 0.18
SHF-211ENST00000561278 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
SHF-211ENST00000561278 ATP5J2-PTCD1G3V325 749 aa16.19■□□□□ 0.18
SHF-211ENST00000561278 ZNF853P0CG23 659 aa16.19■□□□□ 0.18
SHF-211ENST00000561278 LARGE2Q8N3Y3 721 aa16.19■□□□□ 0.18
SHF-211ENST00000561278 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
SHF-211ENST00000561278 LAMB2P55268 1798 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 ANP32CO43423 234 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 POTEIP0CG38 1075 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 GOLGA2Q08379 1002 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 GRIPAP1Q4V328 841 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
SHF-211ENST00000561278 SLC10A5Q5PT55 438 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 CHADLQ6NUI6 762 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 DDX46Q7L014 1031 aaKnown RBP16.18■□□□□ 0.18
SHF-211ENST00000561278 DNAJC5GQ8N7S2 189 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
SHF-211ENST00000561278 MRS2Q9HD23 443 aa16.18■□□□□ 0.18
SHF-211ENST00000561278 ZNF316A6NFI3 1004 aaPredicted RBP16.17■□□□□ 0.18
SHF-211ENST00000561278 FZD9O00144 591 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 EIF6P56537 245 aaKnown RBP16.17■□□□□ 0.18
SHF-211ENST00000561278 RTL5Q5HYW3 569 aaPredicted RBP16.17■□□□□ 0.18
SHF-211ENST00000561278 RIC3Q7Z5B4 369 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 HACL1Q9UJ83 578 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 ATP6V0A2Q9Y487 856 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 GJA3Q9Y6H8 435 aa16.17■□□□□ 0.18
SHF-211ENST00000561278 COL4A5P29400 1685 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 NIM1KQ8IY84 436 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 GPC2Q8N158 579 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
SHF-211ENST00000561278 PHAXQ9H814 394 aaKnown RBP16.16■□□□□ 0.18
SHF-211ENST00000561278 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
SHF-211ENST00000561278 SCN4AP35499 1836 aa16.16■□□□□ 0.18
SHF-211ENST00000561278 GRAPQ13588 217 aa16.15■□□□□ 0.18
SHF-211ENST00000561278 AOC3Q16853 763 aa16.15■□□□□ 0.18
SHF-211ENST00000561278 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
SHF-211ENST00000561278 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
SHF-211ENST00000561278 C8orf58Q8NAV2 365 aa16.15■□□□□ 0.18
SHF-211ENST00000561278 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
SHF-211ENST00000561278 TSR2Q969E8 191 aaKnown RBP16.15■□□□□ 0.18
SHF-211ENST00000561278 ISCA1Q9BUE6 129 aa16.15■□□□□ 0.18
SHF-211ENST00000561278 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms