RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 NEUROD1Q13562 356 aa3.65□□□□□ -1.83
RNF111-211ENST00000560952 GAS6Q14393 721 aa3.65□□□□□ -1.83
RNF111-211ENST00000560952 CRTC2Q53ET0 693 aaPredicted RBP3.65□□□□□ -1.83
RNF111-211ENST00000560952 RNFT1Q5M7Z0 435 aa3.65□□□□□ -1.83
RNF111-211ENST00000560952 TSEN2Q8NCE0 465 aaKnown RBP3.65□□□□□ -1.83
RNF111-211ENST00000560952 ZCCHC2Q9C0B9 1178 aaKnown RBP3.65□□□□□ -1.83
RNF111-211ENST00000560952 TSPAN10Q9H1Z9 355 aaPredicted RBP3.65□□□□□ -1.83
RNF111-211ENST00000560952 GPR25O00155 361 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 ATG7O95352 703 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 IRX6P78412 446 aaPredicted RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 ZDHHC1Q8WTX9 485 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 PBXIP1Q96AQ6 731 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 CCDC136Q96JN2 1154 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 OXCT2Q9BYC2 517 aaPredicted RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 EFCC1Q9HA90 598 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 NDFIP2Q9NV92 336 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 NOVA2Q9UNW9 492 aaKnown RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 PPP1R15AO75807 674 aaPredicted RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 ARAFP10398 606 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 UBAP2LQ14157 1087 aaKnown RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 SCG3Q8WXD2 468 aaKnown RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 C2orf49Q9BVC5 232 aaPredicted RBP3.64□□□□□ -1.83
RNF111-211ENST00000560952 USP3Q9Y6I4 520 aa3.64□□□□□ -1.83
RNF111-211ENST00000560952 ACIN1Q9UKV3 1341 aaKnown RBP3.63□□□□□ -1.83
RNF111-211ENST00000560952 KHNYNO15037 678 aaKnown RBP3.63□□□□□ -1.83
RNF111-211ENST00000560952 BNIP3LO60238 219 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 CELA2BP08218 269 aaPredicted RBP3.63□□□□□ -1.83
RNF111-211ENST00000560952 TXLNAP40222 546 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 RTN1Q16799 776 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 IER5Q5VY09 327 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 ABHD17AQ96GS6 310 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 PHACTR1Q9C0D0 580 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 WDR26Q9H7D7 661 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 MARK1Q9P0L2 795 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 PARP3Q9Y6F1 533 aa3.63□□□□□ -1.83
RNF111-211ENST00000560952 PSPNO60542 156 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 EPB42P16452 691 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 ITGB7P26010 798 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 TNP2Q05952 138 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 ZNF326Q5BKZ1 582 aaKnown RBP3.62□□□□□ -1.83
RNF111-211ENST00000560952 ALDH16A1Q8IZ83 802 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 NEDD1Q8NHV4 660 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 KLRG1Q96E93 195 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 C1orf115Q9H7X2 142 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 OIP5O43482 229 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 CENPBP07199 599 aaPredicted RBP3.62□□□□□ -1.83
RNF111-211ENST00000560952 THBS1P07996 1170 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 MAPTP10636 758 aaKnown RBP3.62□□□□□ -1.83
RNF111-211ENST00000560952 ADH6P28332 368 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 TBCELQ5QJ74 424 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 LYPD4Q6UWN0 246 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 SLCO4C1Q6ZQN7 724 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 CHMP7Q8WUX9 453 aaPredicted RBP3.62□□□□□ -1.83
RNF111-211ENST00000560952 ZNF428Q96B54 188 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 C11orf16Q9NQ32 467 aa3.62□□□□□ -1.83
RNF111-211ENST00000560952 EFSO43281 561 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 C21orf2O43822 256 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 PTCD1O75127 700 aaKnown RBP3.61□□□□□ -1.83
RNF111-211ENST00000560952 WEE1P30291 646 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 ZEB1P37275 1124 aaPredicted RBP3.61□□□□□ -1.83
RNF111-211ENST00000560952 LRRC69Q6ZNQ3 347 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 COL26A1Q96A83 441 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 ACDQ96AP0 544 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 PRR12Q9ULL5 1215 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 HCN4Q9Y3Q4 1203 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 DCDC2BA2VCK2 349 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 TGFBR3LH3BV60 316 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 KCNQ4P56696 695 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 WHAMMQ8TF30 809 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 MYO19Q96H55 970 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 SUSD3Q96L08 255 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 CEP63Q96MT8 703 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 BRPF3Q9ULD4 1205 aa3.61□□□□□ -1.83
RNF111-211ENST00000560952 A0A0U1RQG5 324 aaPredicted RBP3.6□□□□□ -1.83
RNF111-211ENST00000560952 ALAS2P22557 587 aa3.6□□□□□ -1.83
RNF111-211ENST00000560952 SRPK2P78362 688 aaKnown RBP3.6□□□□□ -1.83
RNF111-211ENST00000560952 ZNF468Q5VIY5 522 aaPredicted RBP3.6□□□□□ -1.83
RNF111-211ENST00000560952 C7orf43Q8WVR3 580 aa3.6□□□□□ -1.83
RNF111-211ENST00000560952 EDARADDQ8WWZ3 215 aa3.6□□□□□ -1.83
RNF111-211ENST00000560952 KCNH4Q9UQ05 1017 aa3.6□□□□□ -1.83
RNF111-211ENST00000560952 CNTNAP5Q8WYK1 1306 aa3.6□□□□□ -1.83
RNF111-211ENST00000560952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.59□□□□□ -1.83
RNF111-211ENST00000560952 SIN3BO75182 1162 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 CTBSQ01459 385 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 C11orf91Q3C1V1 193 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 CDCA8Q53HL2 280 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 TICAM2Q86XR7 235 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 CLP1Q92989 425 aaKnown RBP3.59□□□□□ -1.83
RNF111-211ENST00000560952 NGLY1Q96IV0 654 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 BRD7Q9NPI1 651 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 FAM13BQ9NYF5 915 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 MKL2Q9ULH7 1088 aa3.59□□□□□ -1.83
RNF111-211ENST00000560952 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.59□□□□□ -1.83
RNF111-211ENST00000560952 CD33P20138 364 aa3.59□□□□□ -1.84
RNF111-211ENST00000560952 AMPD1P23109 780 aa3.59□□□□□ -1.84
RNF111-211ENST00000560952 ARID4AP29374 1257 aaPredicted RBP3.59□□□□□ -1.84
RNF111-211ENST00000560952 RBM25P49756 843 aaKnown RBP3.59□□□□□ -1.84
RNF111-211ENST00000560952 TYRO3Q06418 890 aa3.59□□□□□ -1.84
RNF111-211ENST00000560952 PCSK7Q16549 785 aa3.59□□□□□ -1.84
RNF111-211ENST00000560952 SH3PXD2AQ5TCZ1 1133 aa3.59□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms