RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
RABGGTA-218ENST00000560777 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
RABGGTA-218ENST00000560777 SMC4Q9NTJ3 1288 aa15.24■□□□□ 0.03
RABGGTA-218ENST00000560777 TRMT112Q9UI30 125 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-218ENST00000560777 KLRG2A4D1S0 409 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 BRPF1P55201 1214 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 C2CD5Q86YS7 1000 aa15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 CCDC191Q8NCU4 936 aa15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 YTHDC1Q96MU7 727 aaKnown RBP15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 ANKRD36CQ5JPF3 1778 aa15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 KIAA1551Q9HCM1 1747 aa15.23■□□□□ 0.03
RABGGTA-218ENST00000560777 N4BP2Q86UW6 1770 aaPredicted RBP15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 H0YIN7 160 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 NEXNQ0ZGT2 675 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 CWF19L2Q2TBE0 894 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 FAM89AQ96GI7 184 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 NOB1Q9ULX3 412 aaKnown RBP15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 ANKRD31Q8N7Z5 1873 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 ABCC12Q96J65 1359 aa15.22■□□□□ 0.03
RABGGTA-218ENST00000560777 PTPRCP08575 1304 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 RNF123Q5XPI4 1314 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 SH3TC1Q8TE82 1336 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 NEURL1BA8MQ27 555 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 BCAR3O75815 825 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 SRGNP10124 158 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 BEND3Q5T5X7 828 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 LINS1Q8NG48 757 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 CWC25Q9NXE8 425 aaPredicted RBP15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 PIM2Q9P1W9 311 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
RABGGTA-218ENST00000560777 HCLS1P14317 486 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 YBX3P16989 372 aaKnown RBP eCLIP15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 C3orf67Q6ZVT6 689 aa15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 JARID2Q92833 1246 aaPredicted RBP15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 GOLGB1Q14789 3259 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-218ENST00000560777 PCCAP05165 728 aaPredicted RBP15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 GCKRQ14397 625 aa15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 GPR162Q16538 588 aa15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 ZNF622Q969S3 477 aaKnown RBP eCLIP15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 NLRP3Q96P20 1036 aa15.19■□□□□ 0.02
RABGGTA-218ENST00000560777 H7C1W4 665 aa15.18■□□□□ 0.02
RABGGTA-218ENST00000560777 STYK1Q6J9G0 422 aa15.18■□□□□ 0.02
RABGGTA-218ENST00000560777 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
RABGGTA-218ENST00000560777 MASTLQ96GX5 879 aa15.18■□□□□ 0.02
RABGGTA-218ENST00000560777 RIC1Q4ADV7 1423 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 IRS4O14654 1257 aaPredicted RBP15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 NPR1P16066 1061 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 DALRD3Q5D0E6 543 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 TTLL6Q8N841 843 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 ARHGAP45Q92619 1136 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
RABGGTA-218ENST00000560777 HOXA10P31260 410 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-218ENST00000560777 SRCIN1Q9C0H9 1055 aa15.16■□□□□ 0.02
RABGGTA-218ENST00000560777 UTRNP46939 3433 aa15.16■□□□□ 0.02
RABGGTA-218ENST00000560777 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-218ENST00000560777 BRCA1P38398 1863 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 ALDH1L1O75891 902 aa15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 CASP7P55210 303 aa15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 FRAT1Q92837 279 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 CNKSR1Q969H4 720 aa15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 API5Q9BZZ5 524 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 KIF16BQ96L93 1317 aa15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 CDHR2Q9BYE9 1310 aa15.15■□□□□ 0.02
RABGGTA-218ENST00000560777 COL11A2P13942 1736 aaPredicted RBP15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 IPO8O15397 1037 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 GRIN3BO60391 1043 aa15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 ALDH1B1P30837 517 aa15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 SF3B3Q15393 1217 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 UBE3BQ7Z3V4 1068 aa15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 RPGRQ92834 1020 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-218ENST00000560777 DLEC1Q9Y238 1755 aa15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 PDE8AO60658 829 aa15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 HSP90B1P14625 803 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 C7orf43Q8WVR3 580 aa15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 RBM17Q96I25 401 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 CRAMP1Q96RY5 1269 aa15.13■□□□□ 0.01
RABGGTA-218ENST00000560777 DDX60Q8IY21 1712 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 GRM8O00222 908 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 TRIM27P14373 513 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 ZKSCAN2Q63HK3 967 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 ATF7IPQ6VMQ6 1270 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 TNNQ9UQP3 1299 aa15.12■□□□□ 0.01
RABGGTA-218ENST00000560777 SLX4Q8IY92 1834 aa15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 C21orf2O43822 256 aa15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 PLA2G12BQ9BX93 195 aa15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 USP44Q9H0E7 712 aa15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 UTYO14607 1347 aa15.11■□□□□ 0.01
RABGGTA-218ENST00000560777 NBPF7P0C2Y1 421 aaPredicted RBP15.1■□□□□ 0.01
RABGGTA-218ENST00000560777 INTS3Q68E01 1043 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms