RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 UBN2Q6ZU65 1347 aa15.23■□□□□ 0.03
HERC1-205ENST00000559886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 ZPR1O75312 459 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 HMMRO75330 724 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 PHF14O94880 888 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 RFC4P35249 363 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 MTX1Q13505 466 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 SMC5Q8IY18 1101 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 JARID2Q92833 1246 aaPredicted RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 BCL2L12Q9HB09 334 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 USP42Q9H9J4 1324 aaKnown RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 PNMA6EA0A0J9YXQ4 647 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 PCCAP05165 728 aaPredicted RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 EZH2Q15910 746 aaKnown RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 USPL1Q5W0Q7 1092 aa15.22■□□□□ 0.03
HERC1-205ENST00000559886 ZBTB38Q8NAP3 1195 aaPredicted RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 SRP68Q9UHB9 627 aaKnown RBP15.22■□□□□ 0.03
HERC1-205ENST00000559886 BAG6P46379 1132 aa15.21■□□□□ 0.03
HERC1-205ENST00000559886 BICC1Q9H694 974 aaKnown RBP15.21■□□□□ 0.03
HERC1-205ENST00000559886 ZNF827Q17R98 1081 aa15.21■□□□□ 0.02
HERC1-205ENST00000559886 PARP10Q53GL7 1025 aa15.21■□□□□ 0.02
HERC1-205ENST00000559886 PPP1R42Q7Z4L9 355 aa15.21■□□□□ 0.02
HERC1-205ENST00000559886 SSH3Q8TE77 659 aa15.21■□□□□ 0.02
HERC1-205ENST00000559886 DCTPP1Q9H773 170 aa15.21■□□□□ 0.02
HERC1-205ENST00000559886 NIP7Q9Y221 180 aaKnown RBP eCLIP15.21■□□□□ 0.02
HERC1-205ENST00000559886 CCDC125Q86Z20 511 aa15.2■□□□□ 0.02
HERC1-205ENST00000559886 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
HERC1-205ENST00000559886 MYH3P11055 1940 aa15.2■□□□□ 0.02
HERC1-205ENST00000559886 POLA2Q14181 598 aa15.2■□□□□ 0.02
HERC1-205ENST00000559886 RTL5Q5HYW3 569 aaPredicted RBP15.2■□□□□ 0.02
HERC1-205ENST00000559886 EPHA10Q5JZY3 1008 aa15.2■□□□□ 0.02
HERC1-205ENST00000559886 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 SRGAP3O43295 1099 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 RABL6Q3YEC7 729 aaPredicted RBP15.19■□□□□ 0.02
HERC1-205ENST00000559886 FAM89AQ96GI7 184 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 TFCP2L1Q9NZI6 479 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 TRMT112Q9UI30 125 aaKnown RBP15.19■□□□□ 0.02
HERC1-205ENST00000559886 CDHR2Q9BYE9 1310 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 SUSD4Q5VX71 490 aa15.19■□□□□ 0.02
HERC1-205ENST00000559886 FOXO4P98177 505 aa15.18■□□□□ 0.02
HERC1-205ENST00000559886 TBC1D9BQ66K14 1250 aa15.18■□□□□ 0.02
HERC1-205ENST00000559886 DEFB132Q7Z7B7 95 aa15.18■□□□□ 0.02
HERC1-205ENST00000559886 UTP14AQ9BVJ6 771 aaKnown RBP15.18■□□□□ 0.02
HERC1-205ENST00000559886 PLA2G12BQ9BX93 195 aa15.18■□□□□ 0.02
HERC1-205ENST00000559886 QSER1Q2KHR3 1735 aa15.17■□□□□ 0.02
HERC1-205ENST00000559886 SYNE4Q8N205 404 aa15.17■□□□□ 0.02
HERC1-205ENST00000559886 LAMB2P55268 1798 aa15.17■□□□□ 0.02
HERC1-205ENST00000559886 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
HERC1-205ENST00000559886 NTSR2O95665 410 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 SETDB2Q96T68 719 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 SH3TC1Q8TE82 1336 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 DDX60Q8IY21 1712 aaKnown RBP15.16■□□□□ 0.02
HERC1-205ENST00000559886 GYS1P13807 737 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 NUCB1Q02818 461 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 LMBR1LQ6UX01 489 aa15.16■□□□□ 0.02
HERC1-205ENST00000559886 IRS4O14654 1257 aaPredicted RBP15.15■□□□□ 0.02
HERC1-205ENST00000559886 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
HERC1-205ENST00000559886 COL23A1Q86Y22 540 aaPredicted RBP15.15■□□□□ 0.02
HERC1-205ENST00000559886 ANO8Q9HCE9 1232 aaPredicted RBP15.15■□□□□ 0.02
HERC1-205ENST00000559886 FAM177BA6PVY3 158 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 PNPLA7Q6ZV29 1317 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 PDE8AO60658 829 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 CSF1RP07333 972 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 ANKRD45Q5TZF3 282 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 EXOC6BQ9Y2D4 811 aa15.14■□□□□ 0.01
HERC1-205ENST00000559886 NOP58Q9Y2X3 529 aaKnown RBP15.14■□□□□ 0.01
HERC1-205ENST00000559886 NFIXQ14938 502 aa15.13■□□□□ 0.01
HERC1-205ENST00000559886 NYXQ9GZU5 481 aa15.13■□□□□ 0.01
HERC1-205ENST00000559886 STK32BQ9NY57 414 aa15.13■□□□□ 0.01
HERC1-205ENST00000559886 CASZ1Q86V15 1759 aa15.13■□□□□ 0.01
HERC1-205ENST00000559886 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
HERC1-205ENST00000559886 HSP90B1P14625 803 aaKnown RBP15.12■□□□□ 0.01
HERC1-205ENST00000559886 RFX5P48382 616 aaPredicted RBP15.12■□□□□ 0.01
HERC1-205ENST00000559886 CHD1LQ86WJ1 897 aa15.12■□□□□ 0.01
HERC1-205ENST00000559886 CARMIL3Q8ND23 1372 aa15.12■□□□□ 0.01
HERC1-205ENST00000559886 CTSWP56202 376 aa15.12■□□□□ 0.01
HERC1-205ENST00000559886 NUTM1Q86Y26 1132 aa15.12■□□□□ 0.01
HERC1-205ENST00000559886 TM4SF1P30408 202 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 HSP90AB4PQ58FF6 505 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 TTLL11Q8NHH1 800 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 COPRSQ9NQ92 184 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 RAB11FIP3O75154 756 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 HCLS1P14317 486 aaPredicted RBP15.11■□□□□ 0.01
HERC1-205ENST00000559886 ERFEQ4G0M1 354 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 TPTE2Q6XPS3 522 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 NBPF5PQ86XG9 351 aaPredicted RBP15.11■□□□□ 0.01
HERC1-205ENST00000559886 LNPKQ9C0E8 428 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 PA2G4Q9UQ80 394 aaKnown RBP15.11■□□□□ 0.01
HERC1-205ENST00000559886 CHMP3Q9Y3E7 222 aa15.11■□□□□ 0.01
HERC1-205ENST00000559886 MSH5O43196 834 aa15.1■□□□□ 0.01
HERC1-205ENST00000559886 PTPN12Q05209 780 aaKnown RBP15.1■□□□□ 0.01
HERC1-205ENST00000559886 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
HERC1-205ENST00000559886 NLGN1Q8N2Q7 840 aa15.1■□□□□ 0.01
HERC1-205ENST00000559886 APBB1O00213 710 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms