RNA–Protein interactions for RNA: ENST00000559578.1

PBX1-217, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-217ENST00000559578 EAPPQ56P03 285 aaPredicted RBP31.46■■■□□ 2.63
PBX1-217ENST00000559578 ZNF34Q8IZ26 560 aa31.46■■■□□ 2.63
PBX1-217ENST00000559578 RALBP1Q15311 655 aa31.45■■■□□ 2.63
PBX1-217ENST00000559578 GRIPAP1Q4V328 841 aa31.45■■■□□ 2.63
PBX1-217ENST00000559578 PPP1R42Q7Z4L9 355 aa31.45■■■□□ 2.63
PBX1-217ENST00000559578 RBM17Q96I25 401 aaKnown RBP31.45■■■□□ 2.63
PBX1-217ENST00000559578 MKRN1Q9UHC7 482 aaKnown RBP31.45■■■□□ 2.63
PBX1-217ENST00000559578 PASKQ96RG2 1323 aa31.45■■■□□ 2.62
PBX1-217ENST00000559578 SNED1Q8TER0 1413 aa31.44■■■□□ 2.62
PBX1-217ENST00000559578 EPHX2P34913 555 aa31.44■■■□□ 2.62
PBX1-217ENST00000559578 PARP10Q53GL7 1025 aa31.43■■■□□ 2.62
PBX1-217ENST00000559578 PNMA8AQ86V59 439 aaPredicted RBP31.43■■■□□ 2.62
PBX1-217ENST00000559578 GPC2Q8N158 579 aa31.43■■■□□ 2.62
PBX1-217ENST00000559578 BABAM1Q9NWV8 329 aa31.43■■■□□ 2.62
PBX1-217ENST00000559578 CLEC11AQ9Y240 323 aa31.43■■■□□ 2.62
PBX1-217ENST00000559578 NTSR2O95665 410 aa31.42■■■□□ 2.62
PBX1-217ENST00000559578 EIF2S2P20042 333 aaKnown RBP31.42■■■□□ 2.62
PBX1-217ENST00000559578 TNS4Q8IZW8 715 aa31.42■■■□□ 2.62
PBX1-217ENST00000559578 CRAMP1Q96RY5 1269 aa31.42■■■□□ 2.62
PBX1-217ENST00000559578 RNF123Q5XPI4 1314 aa31.42■■■□□ 2.62
PBX1-217ENST00000559578 LMOD3Q0VAK6 560 aa31.41■■■□□ 2.62
PBX1-217ENST00000559578 EIF6P56537 245 aaKnown RBP31.4■■■□□ 2.62
PBX1-217ENST00000559578 PDIA6Q15084 440 aa31.39■■■□□ 2.62
PBX1-217ENST00000559578 NLRP3Q96P20 1036 aa31.39■■■□□ 2.62
PBX1-217ENST00000559578 PPEF1O14829 653 aaPredicted RBP31.38■■■□□ 2.61
PBX1-217ENST00000559578 ITGBL1O95965 494 aaPredicted RBP31.38■■■□□ 2.61
PBX1-217ENST00000559578 TMPOP42166 694 aaKnown RBP31.38■■■□□ 2.61
PBX1-217ENST00000559578 LRP10Q7Z4F1 713 aa31.38■■■□□ 2.61
PBX1-217ENST00000559578 TMEM88BA6NKF7 163 aa31.37■■■□□ 2.61
PBX1-217ENST00000559578 LARGE2Q8N3Y3 721 aa31.37■■■□□ 2.61
PBX1-217ENST00000559578 UTP14AQ9BVJ6 771 aaKnown RBP31.37■■■□□ 2.61
PBX1-217ENST00000559578 TMX4Q9H1E5 349 aaPredicted RBP31.37■■■□□ 2.61
PBX1-217ENST00000559578 CNTNAP1P78357 1384 aa31.37■■■□□ 2.61
PBX1-217ENST00000559578 ADAMTSL1Q8N6G6 1762 aa31.36■■■□□ 2.61
PBX1-217ENST00000559578 TCERG1O14776 1098 aaKnown RBP31.36■■■□□ 2.61
PBX1-217ENST00000559578 GJA3Q9Y6H8 435 aa31.36■■■□□ 2.61
PBX1-217ENST00000559578 C3orf67Q6ZVT6 689 aa31.35■■■□□ 2.61
PBX1-217ENST00000559578 ANXA1P04083 346 aa31.34■■■□□ 2.61
PBX1-217ENST00000559578 LMOD1P29536 600 aaPredicted RBP31.34■■■□□ 2.61
PBX1-217ENST00000559578 PROSER3Q2NL68 480 aa31.34■■■□□ 2.61
PBX1-217ENST00000559578 SLC10A5Q5PT55 438 aa31.34■■■□□ 2.61
PBX1-217ENST00000559578 CNTROBQ8N137 903 aa31.33■■■□□ 2.61
PBX1-217ENST00000559578 COL4A5P29400 1685 aa31.32■■■□□ 2.6
PBX1-217ENST00000559578 HSP90AB3PQ58FF7 597 aa31.32■■■□□ 2.6
PBX1-217ENST00000559578 MAP1SQ66K74 1059 aaPredicted RBP31.32■■■□□ 2.6
PBX1-217ENST00000559578 CAPN15O75808 1086 aa31.31■■■□□ 2.6
PBX1-217ENST00000559578 AIMP1Q12904 312 aaKnown RBP31.3■■■□□ 2.6
PBX1-217ENST00000559578 COPS6Q7L5N1 327 aa31.3■■■□□ 2.6
PBX1-217ENST00000559578 NIM1KQ8IY84 436 aa31.3■■■□□ 2.6
PBX1-217ENST00000559578 NECTIN2Q92692 538 aa31.3■■■□□ 2.6
PBX1-217ENST00000559578 ATP6V0A2Q9Y487 856 aa31.3■■■□□ 2.6
PBX1-217ENST00000559578 MYBBP1AQ9BQG0 1328 aaKnown RBP31.29■■■□□ 2.6
PBX1-217ENST00000559578 NEUROD2Q15784 382 aa31.29■■■□□ 2.6
PBX1-217ENST00000559578 XAGE3Q8WTP9 111 aa31.29■■■□□ 2.6
PBX1-217ENST00000559578 ANKRD36CQ5JPF3 1778 aa31.29■■■□□ 2.6
PBX1-217ENST00000559578 PPIP5K2O43314 1243 aa31.28■■■□□ 2.6
PBX1-217ENST00000559578 SLC51AQ86UW1 340 aa31.28■■■□□ 2.6
PBX1-217ENST00000559578 CCDC146Q8IYE0 955 aa31.28■■■□□ 2.6
PBX1-217ENST00000559578 VPS33BQ9H267 617 aa31.28■■■□□ 2.6
PBX1-217ENST00000559578 ABCC4O15439 1325 aa31.27■■■□□ 2.6
PBX1-217ENST00000559578 VEGFBP49765 207 aa31.27■■■□□ 2.6
PBX1-217ENST00000559578 NLRP10Q86W26 655 aa31.26■■■□□ 2.59
PBX1-217ENST00000559578 SUPT20HQ8NEM7 779 aa31.26■■■□□ 2.59
PBX1-217ENST00000559578 DDX21Q9NR30 783 aaKnown RBP eCLIP31.26■■■□□ 2.59
PBX1-217ENST00000559578 CHL1O00533 1208 aa31.25■■■□□ 2.59
PBX1-217ENST00000559578 BBOX1O75936 387 aa31.25■■■□□ 2.59
PBX1-217ENST00000559578 SCNN1DP51172 638 aa31.25■■■□□ 2.59
PBX1-217ENST00000559578 LAS1LQ9Y4W2 734 aaKnown RBP31.25■■■□□ 2.59
PBX1-217ENST00000559578 LTBP1Q14766 1721 aa31.24■■■□□ 2.59
PBX1-217ENST00000559578 EPS15P42566 896 aa31.24■■■□□ 2.59
PBX1-217ENST00000559578 DDX10Q13206 875 aaKnown RBP31.24■■■□□ 2.59
PBX1-217ENST00000559578 TCIRG1Q13488 830 aa31.24■■■□□ 2.59
PBX1-217ENST00000559578 WDR43Q15061 677 aaKnown RBP eCLIP31.24■■■□□ 2.59
PBX1-217ENST00000559578 AOC3Q16853 763 aa31.24■■■□□ 2.59
PBX1-217ENST00000559578 RUNDC1Q96C34 613 aa31.24■■■□□ 2.59
PBX1-217ENST00000559578 TRMT112Q9UI30 125 aaKnown RBP31.24■■■□□ 2.59
PBX1-217ENST00000559578 LAMB2P55268 1798 aa31.23■■■□□ 2.59
PBX1-217ENST00000559578 HCLS1P14317 486 aaPredicted RBP31.23■■■□□ 2.59
PBX1-217ENST00000559578 AIDAQ96BJ3 306 aa31.23■■■□□ 2.59
PBX1-217ENST00000559578 FOXN1O15353 648 aa31.22■■■□□ 2.59
PBX1-217ENST00000559578 DEFB115Q30KQ5 88 aa31.22■■■□□ 2.59
PBX1-217ENST00000559578 USP50Q70EL3 339 aaPredicted RBP31.22■■■□□ 2.59
PBX1-217ENST00000559578 DDX46Q7L014 1031 aaKnown RBP31.22■■■□□ 2.59
PBX1-217ENST00000559578 SP8Q8IXZ3 490 aa31.22■■■□□ 2.59
PBX1-217ENST00000559578 SH3TC1Q8TE82 1336 aa31.22■■■□□ 2.59
PBX1-217ENST00000559578 RASSF10A6NK89 507 aa31.21■■■□□ 2.59
PBX1-217ENST00000559578 KRT24Q2M2I5 525 aa31.21■■■□□ 2.59
PBX1-217ENST00000559578 DPP8Q6V1X1 898 aaPredicted RBP31.21■■■□□ 2.59
PBX1-217ENST00000559578 RTFDC1Q9BY42 306 aaPredicted RBP31.21■■■□□ 2.59
PBX1-217ENST00000559578 ZNRF3Q9ULT6 936 aa31.21■■■□□ 2.59
PBX1-217ENST00000559578 ABT1Q9ULW3 272 aaKnown RBP31.21■■■□□ 2.59
PBX1-217ENST00000559578 CHPF2Q9P2E5 772 aa31.2■■■□□ 2.59
PBX1-217ENST00000559578 TRIM35Q9UPQ4 493 aa31.2■■■□□ 2.59
PBX1-217ENST00000559578 MPNDQ8N594 471 aa31.19■■■□□ 2.58
PBX1-217ENST00000559578 HOXB7P09629 217 aa31.18■■■□□ 2.58
PBX1-217ENST00000559578 HDGFL1Q5TGJ6 251 aa31.18■■■□□ 2.58
PBX1-217ENST00000559578 CTCFP49711 727 aaPredicted RBP31.17■■■□□ 2.58
PBX1-217ENST00000559578 GRAPQ13588 217 aa31.17■■■□□ 2.58
PBX1-217ENST00000559578 GRAPLQ8TC17 118 aaPredicted RBP31.17■■■□□ 2.58
PBX1-217ENST00000559578 GPRC5DQ9NZD1 345 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms