RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 SLFN5Q08AF3 891 aa16.37■□□□□ 0.21
RABGGTA-207ENST00000558936 CRY2Q49AN0 593 aa16.37■□□□□ 0.21
RABGGTA-207ENST00000558936 HYPKQ9NX55 129 aa16.37■□□□□ 0.21
RABGGTA-207ENST00000558936 RIC1Q4ADV7 1423 aa16.36■□□□□ 0.21
RABGGTA-207ENST00000558936 NFKBIEO00221 500 aa16.36■□□□□ 0.21
RABGGTA-207ENST00000558936 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
RABGGTA-207ENST00000558936 SLC10A5Q5PT55 438 aa16.36■□□□□ 0.21
RABGGTA-207ENST00000558936 TPTE2Q6XPS3 522 aa16.36■□□□□ 0.21
RABGGTA-207ENST00000558936 H0YIN7 160 aa16.35■□□□□ 0.21
RABGGTA-207ENST00000558936 IGKV5-2P06315 115 aa16.35■□□□□ 0.21
RABGGTA-207ENST00000558936 RASSF7Q02833 373 aa16.35■□□□□ 0.21
RABGGTA-207ENST00000558936 ZNF784Q8NCA9 323 aaPredicted RBP16.35■□□□□ 0.21
RABGGTA-207ENST00000558936 PDE6BP35913 854 aa16.34■□□□□ 0.21
RABGGTA-207ENST00000558936 CCDC30Q5VVM6 783 aa16.34■□□□□ 0.21
RABGGTA-207ENST00000558936 TTLL6Q8N841 843 aa16.34■□□□□ 0.21
RABGGTA-207ENST00000558936 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
RABGGTA-207ENST00000558936 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 HCLS1P14317 486 aaPredicted RBP16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 ST5P78524 1137 aa16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 STYK1Q6J9G0 422 aa16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.2
RABGGTA-207ENST00000558936 PI4KAP2A4QPH2 592 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 C21orf2O43822 256 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 COL4A5P29400 1685 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 PRPF40BQ6NWY9 871 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 PI4KAP1Q8N8J0 262 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 MASTLQ96GX5 879 aa16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 UTP14AQ9BVJ6 771 aaKnown RBP16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 ZNF219Q9P2Y4 722 aaPredicted RBP16.32■□□□□ 0.2
RABGGTA-207ENST00000558936 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 HOXA10P31260 410 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 FAM89AQ96GI7 184 aa16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 MYD88Q99836 296 aa16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
RABGGTA-207ENST00000558936 RTL5Q5HYW3 569 aaPredicted RBP16.3■□□□□ 0.2
RABGGTA-207ENST00000558936 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
RABGGTA-207ENST00000558936 NPR1P16066 1061 aa16.29■□□□□ 0.2
RABGGTA-207ENST00000558936 FLIIQ13045 1269 aa16.29■□□□□ 0.2
RABGGTA-207ENST00000558936 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
RABGGTA-207ENST00000558936 RIC3Q7Z5B4 369 aa16.29■□□□□ 0.2
RABGGTA-207ENST00000558936 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
RABGGTA-207ENST00000558936 F6X3S4 739 aa16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 CASP7P55210 303 aa16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 TRMT112Q9UI30 125 aaKnown RBP16.28■□□□□ 0.2
RABGGTA-207ENST00000558936 E9PSI1 815 aa16.27■□□□□ 0.2
RABGGTA-207ENST00000558936 C9orf131Q5VYM1 1079 aa16.27■□□□□ 0.2
RABGGTA-207ENST00000558936 SSH1Q8WYL5 1049 aa16.27■□□□□ 0.2
RABGGTA-207ENST00000558936 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
RABGGTA-207ENST00000558936 TIAM2Q8IVF5 1701 aa16.27■□□□□ 0.19
RABGGTA-207ENST00000558936 ABCC4O15439 1325 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 LRRC37AA6NMS7 1700 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 LTBP1Q14766 1721 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 NPHP1O15259 732 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 CNKSR1Q969H4 720 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
RABGGTA-207ENST00000558936 GTF2E1P29083 439 aaPredicted RBP16.25■□□□□ 0.19
RABGGTA-207ENST00000558936 MYH3P11055 1940 aa16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 SF3B3Q15393 1217 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 BEND3Q5T5X7 828 aa16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 ZBTB38Q8NAP3 1195 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 CELF1Q92879 486 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 CRAMP1Q96RY5 1269 aa16.24■□□□□ 0.19
RABGGTA-207ENST00000558936 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 H7C1W4 665 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 IRS4O14654 1257 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 PCCAP05165 728 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 NLRP3Q96P20 1036 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 BCL2L13Q9BXK5 485 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 STK31Q9BXU1 1019 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 SEC31BQ9NQW1 1179 aa16.23■□□□□ 0.19
RABGGTA-207ENST00000558936 DNAAF4Q8WXU2 420 aa16.22■□□□□ 0.19
RABGGTA-207ENST00000558936 LTBP3Q9NS15 1303 aa16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 WTIPA6NIX2 430 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 POTECB2RU33 542 aa16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 GCKRQ14397 625 aa16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 CWC25Q9NXE8 425 aaPredicted RBP16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 RNF181Q9P0P0 153 aa16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 SPEF2Q9C093 1822 aa16.21■□□□□ 0.19
RABGGTA-207ENST00000558936 KIF3CO14782 793 aa16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 ALDH1B1P30837 517 aa16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 EPHA10Q5JZY3 1008 aa16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 TNNQ9UQP3 1299 aa16.2■□□□□ 0.18
RABGGTA-207ENST00000558936 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
RABGGTA-207ENST00000558936 DDX58O95786 925 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-207ENST00000558936 LMNB1P20700 586 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms