RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 LARP1BQ659C4 914 aaKnown RBP18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 SYT10Q6XYQ8 523 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 NAT10Q9H0A0 1025 aaKnown RBP18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 ZSWIM6Q9HCJ5 1215 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 ST7Q9NRC1 585 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 PDRG1Q9NUG6 133 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 CYP46A1Q9Y6A2 500 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 PTPRMP28827 1452 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 TTC41PQ6P2S7 1318 aa18.99■□□□□ 0.63
HMBOX1-212ENST00000558662 USP27XA6NNY8 438 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 PAXIP1Q6ZW49 1069 aaPredicted RBP18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 SRLQ86TD4 932 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 CNTROBQ8N137 903 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 PXDNLA1KZ92 1463 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 SOS1Q07889 1333 aaPredicted RBP18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 VPS37CA5D8V6 355 aaPredicted RBP18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 CCDC191Q8NCU4 936 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 MYCBPQ99417 103 aaPredicted RBP18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 NCAPGQ9BPX3 1015 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 DNAJC25Q9H1X3 360 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 ANO10Q9NW15 660 aa18.98■□□□□ 0.63
HMBOX1-212ENST00000558662 GUCY2CP25092 1073 aa18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 CCDC83Q8IWF9 413 aa18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 CKAP2LQ8IYA6 745 aa18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 LEO1Q8WVC0 666 aaPredicted RBP18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 ATG3Q9NT62 314 aa18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 POGZQ7Z3K3 1410 aa18.97■□□□□ 0.63
HMBOX1-212ENST00000558662 BECN2A8MW95 431 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 CLGNO14967 610 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 CAMK4Q16566 473 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 GPR161Q8N6U8 529 aaKnown RBP18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 DNAI1Q9UI46 699 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 NPATQ14207 1427 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 NRKQ7Z2Y5 1582 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 PLEKHG2Q9H7P9 1386 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 CASTP20810 708 aaKnown RBP18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 TUBB4BP68371 445 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 LRRFIP1Q32MZ4 808 aaKnown RBP18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 ATL3Q6DD88 541 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 FCHSD1Q86WN1 690 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 MNS1Q8NEH6 495 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 CFAP45Q9UL16 551 aa18.96■□□□□ 0.63
HMBOX1-212ENST00000558662 KIDINS220Q9ULH0 1771 aa18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 PSMA5P28066 241 aa18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 MAGEA9P43362 315 aa18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 ETF1P62495 437 aaKnown RBP18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 ZFP91Q96JP5 570 aaPredicted RBP18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 PPP1R13BQ96KQ4 1090 aa18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 CHMP4AQ9BY43 222 aa18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 USP42Q9H9J4 1324 aaKnown RBP18.95■□□□□ 0.62
HMBOX1-212ENST00000558662 ACTN2P35609 894 aa18.94■□□□□ 0.62
HMBOX1-212ENST00000558662 NEK11Q8NG66 645 aa18.94■□□□□ 0.62
HMBOX1-212ENST00000558662 ZSCAN16Q9H4T2 348 aaPredicted RBP18.94■□□□□ 0.62
HMBOX1-212ENST00000558662 EXOC6BQ9Y2D4 811 aa18.94■□□□□ 0.62
HMBOX1-212ENST00000558662 RRP15Q9Y3B9 282 aaKnown RBP18.94■□□□□ 0.62
HMBOX1-212ENST00000558662 TADA3O75528 432 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 SMC1AQ14683 1233 aaKnown RBP18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 CEP57L1Q8IYX8 460 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 BPIFA3Q9BQP9 254 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 MKRN1Q9UHC7 482 aaKnown RBP18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 MAP3K5Q99683 1374 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 HMOX1P09601 288 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 ZKSCAN1P17029 563 aaPredicted RBP18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 OAS2P29728 719 aaKnown RBP18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 LEKR1Q6ZMV7 388 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 BICD2Q8TD16 824 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 SMARCE1Q969G3 411 aa18.93■□□□□ 0.62
HMBOX1-212ENST00000558662 GOLGA6L9A6NEM1 432 aa18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 PSME1Q06323 249 aa18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 KRT24Q2M2I5 525 aa18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 E4F1Q66K89 784 aaPredicted RBP18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 ARFGAP3Q9NP61 516 aa18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 MLH3Q9UHC1 1453 aa18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 XRN1Q8IZH2 1706 aaKnown RBP18.92■□□□□ 0.62
HMBOX1-212ENST00000558662 EDC4Q6P2E9 1401 aaKnown RBP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 RASEFQ8IZ41 740 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 PPM1EQ8WY54 764 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 MPHOSPH8Q99549 860 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 TRMT1Q9NXH9 659 aaKnown RBP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 DLC1Q96QB1 1528 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 KIF13AQ9H1H9 1805 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 MYH15Q9Y2K3 1946 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 RICTORQ6R327 1708 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 SFPQP23246 707 aaKnown RBP eCLIP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 TTC31Q49AM3 519 aaPredicted RBP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 CC2D1AQ6P1N0 951 aaPredicted RBP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 SUGP1Q8IWZ8 645 aaKnown RBP18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 C10orf67Q8IYJ2 551 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 NFATC2IPQ8NCF5 419 aa18.91■□□□□ 0.62
HMBOX1-212ENST00000558662 NR1I2O75469 434 aa18.9■□□□□ 0.62
HMBOX1-212ENST00000558662 TBC1D8O95759 1140 aa18.9■□□□□ 0.62
HMBOX1-212ENST00000558662 SLC4A2P04920 1241 aa18.9■□□□□ 0.62
HMBOX1-212ENST00000558662 UNC5CLQ8IV45 518 aa18.9■□□□□ 0.62
HMBOX1-212ENST00000558662 TRERF1Q96PN7 1200 aa18.9■□□□□ 0.62
HMBOX1-212ENST00000558662 POLR3GO15318 223 aaPredicted RBP18.89■□□□□ 0.61
HMBOX1-212ENST00000558662 LARGE1O95461 756 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms