RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 SCN7AQ01118 1682 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 PCNTO95613 3336 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 PI4KAP2A4QPH2 592 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 GPTP24298 496 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 PI4KAP1Q8N8J0 262 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 SBF1O95248 1867 aa15.6■□□□□ 0.09
RCCD1-209ENST00000557750 PRELPP51888 382 aa15.59■□□□□ 0.09
RCCD1-209ENST00000557750 COL13A1Q5TAT6 717 aaPredicted RBP15.59■□□□□ 0.09
RCCD1-209ENST00000557750 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
RCCD1-209ENST00000557750 MAP3K2Q9Y2U5 619 aa15.59■□□□□ 0.09
RCCD1-209ENST00000557750 CARMIL3Q8ND23 1372 aa15.58■□□□□ 0.09
RCCD1-209ENST00000557750 NPHP1O15259 732 aa15.58■□□□□ 0.08
RCCD1-209ENST00000557750 TCIRG1Q13488 830 aa15.58■□□□□ 0.08
RCCD1-209ENST00000557750 SMC1BQ8NDV3 1235 aa15.58■□□□□ 0.08
RCCD1-209ENST00000557750 FAM177BA6PVY3 158 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 SERPINB2P05120 415 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 MYD88Q99836 296 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 BCORQ6W2J9 1755 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 TNRC6CQ9HCJ0 1690 aaKnown RBP15.57■□□□□ 0.08
RCCD1-209ENST00000557750 ATP5J2-PTCD1G3V325 749 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 BCAR3O75815 825 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 LMNB1P20700 586 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 NBPF5PQ86XG9 351 aaPredicted RBP15.57■□□□□ 0.08
RCCD1-209ENST00000557750 ZNF34Q8IZ26 560 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 PTPRCP08575 1304 aa15.57■□□□□ 0.08
RCCD1-209ENST00000557750 ZC3H4Q9UPT8 1303 aaKnown RBP15.57■□□□□ 0.08
RCCD1-209ENST00000557750 F6X3S4 739 aa15.56■□□□□ 0.08
RCCD1-209ENST00000557750 NEXNQ0ZGT2 675 aa15.56■□□□□ 0.08
RCCD1-209ENST00000557750 DNAAF4Q8WXU2 420 aa15.56■□□□□ 0.08
RCCD1-209ENST00000557750 METTL22Q9BUU2 404 aaPredicted RBP15.56■□□□□ 0.08
RCCD1-209ENST00000557750 NOB1Q9ULX3 412 aaKnown RBP15.56■□□□□ 0.08
RCCD1-209ENST00000557750 UBN2Q6ZU65 1347 aa15.56■□□□□ 0.08
RCCD1-209ENST00000557750 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
RCCD1-209ENST00000557750 PARP10Q53GL7 1025 aa15.55■□□□□ 0.08
RCCD1-209ENST00000557750 C2CD5Q86YS7 1000 aa15.55■□□□□ 0.08
RCCD1-209ENST00000557750 TTLL6Q8N841 843 aa15.55■□□□□ 0.08
RCCD1-209ENST00000557750 KIF16BQ96L93 1317 aa15.55■□□□□ 0.08
RCCD1-209ENST00000557750 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 VEGFAP15692 232 aaPredicted RBP15.54■□□□□ 0.08
RCCD1-209ENST00000557750 GTF2E1P29083 439 aaPredicted RBP15.54■□□□□ 0.08
RCCD1-209ENST00000557750 BRPF1P55201 1214 aaPredicted RBP15.54■□□□□ 0.08
RCCD1-209ENST00000557750 SLC4A10Q6U841 1118 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 TPTE2Q6XPS3 522 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 FRAT1Q92837 279 aaPredicted RBP15.54■□□□□ 0.08
RCCD1-209ENST00000557750 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 RCAN3Q9UKA8 241 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 NRXN2Q9P2S2 1712 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 SUSD4Q5VX71 490 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 PPP1R42Q7Z4L9 355 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 NLRP10Q86W26 655 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 NYXQ9GZU5 481 aa15.54■□□□□ 0.08
RCCD1-209ENST00000557750 H0YIN7 160 aa15.53■□□□□ 0.08
RCCD1-209ENST00000557750 NFKBIEO00221 500 aa15.53■□□□□ 0.08
RCCD1-209ENST00000557750 PRR5LQ6MZQ0 368 aa15.53■□□□□ 0.08
RCCD1-209ENST00000557750 CCDC24Q8N4L8 307 aa15.53■□□□□ 0.08
RCCD1-209ENST00000557750 UTP14AQ9BVJ6 771 aaKnown RBP15.53■□□□□ 0.08
RCCD1-209ENST00000557750 IPO8O15397 1037 aaKnown RBP15.52■□□□□ 0.08
RCCD1-209ENST00000557750 ST5P78524 1137 aa15.52■□□□□ 0.08
RCCD1-209ENST00000557750 CWF19L2Q2TBE0 894 aaKnown RBP15.52■□□□□ 0.08
RCCD1-209ENST00000557750 NUTM1Q86Y26 1132 aa15.52■□□□□ 0.08
RCCD1-209ENST00000557750 API5Q9BZZ5 524 aaKnown RBP15.52■□□□□ 0.08
RCCD1-209ENST00000557750 NTSR2O95665 410 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 IGKV5-2P06315 115 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 TRIM28Q13263 835 aaKnown RBP15.51■□□□□ 0.07
RCCD1-209ENST00000557750 CCDC191Q8NCU4 936 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 CWC25Q9NXE8 425 aaPredicted RBP15.51■□□□□ 0.07
RCCD1-209ENST00000557750 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
RCCD1-209ENST00000557750 DLEC1Q9Y238 1755 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 NEURL1BA8MQ27 555 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 POTECB2RU33 542 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 CAPN15O75808 1086 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 LINS1Q8NG48 757 aa15.51■□□□□ 0.07
RCCD1-209ENST00000557750 ARFGEF2Q9Y6D5 1785 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 IBTKQ9P2D0 1353 aaPredicted RBP15.5■□□□□ 0.07
RCCD1-209ENST00000557750 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 RTL5Q5HYW3 569 aaPredicted RBP15.5■□□□□ 0.07
RCCD1-209ENST00000557750 BEND3Q5T5X7 828 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 TNS4Q8IZW8 715 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 NUP98P52948 1817 aa15.5■□□□□ 0.07
RCCD1-209ENST00000557750 SH3TC1Q8TE82 1336 aa15.49■□□□□ 0.07
RCCD1-209ENST00000557750 ZKSCAN2Q63HK3 967 aa15.49■□□□□ 0.07
RCCD1-209ENST00000557750 ATF7IPQ6VMQ6 1270 aa15.49■□□□□ 0.07
RCCD1-209ENST00000557750 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.071e-7■□□□□ 10.9
RCCD1-209ENST00000557750 FAM89AQ96GI7 184 aa15.49■□□□□ 0.07
RCCD1-209ENST00000557750 SRCIN1Q9C0H9 1055 aa15.49■□□□□ 0.07
RCCD1-209ENST00000557750 TRIM27P14373 513 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 BRIP1Q9BX63 1249 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 ZNF219Q9P2Y4 722 aaPredicted RBP15.48■□□□□ 0.07
RCCD1-209ENST00000557750 CACNA1FO60840 1977 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 TIAM2Q8IVF5 1701 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 RNF123Q5XPI4 1314 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 C21orf2O43822 256 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 GCKRQ14397 625 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 SYNE4Q8N205 404 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
RCCD1-209ENST00000557750 CLUAP1Q96AJ1 413 aa15.48■□□□□ 0.07
RCCD1-209ENST00000557750 ABCC12Q96J65 1359 aa15.47■□□□□ 0.07
RCCD1-209ENST00000557750 CCDC88AQ3V6T2 1871 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms