RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 ANO10Q9NW15 660 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 FLT4P35916 1363 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
CHD8-213ENST00000557364 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 NCOA7Q8NI08 942 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 ESR2Q92731 530 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 MAP3K2Q9Y2U5 619 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 H0YHG0 523 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 SUPT20HQ8NEM7 779 aa9.66□□□□□ -0.86
CHD8-213ENST00000557364 GPATCH8Q9UKJ3 1502 aaKnown RBP9.65□□□□□ -0.86
CHD8-213ENST00000557364 CALM1P0DP23 149 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 CALM2P0DP24 149 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 CALM3P0DP25 149 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 CEBPAP49715 358 aaPredicted RBP9.65□□□□□ -0.86
CHD8-213ENST00000557364 NAP1L4Q99733 375 aaKnown RBP9.65□□□□□ -0.86
CHD8-213ENST00000557364 IL1RAPL2Q9NP60 686 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 UGGT2Q9NYU1 1516 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 GOLGA8AA7E2F4 631 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 GOLGA8BA8MQT2 603 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 ZSCAN12O43309 604 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 USO1O60763 962 aaKnown RBP9.65□□□□□ -0.86
CHD8-213ENST00000557364 ARHGAP45Q92619 1136 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 TTC12Q9H892 705 aaPredicted RBP9.65□□□□□ -0.86
CHD8-213ENST00000557364 RMND1Q9NWS8 449 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.86
CHD8-213ENST00000557364 STAMBPO95630 424 aa9.65□□□□□ -0.87
CHD8-213ENST00000557364 AXDND1Q5T1B0 1012 aaPredicted RBP9.65□□□□□ -0.87
CHD8-213ENST00000557364 TFCP2L1Q9NZI6 479 aa9.65□□□□□ -0.87
CHD8-213ENST00000557364 LRRFIP2Q9Y608 721 aaKnown RBP9.65□□□□□ -0.87
CHD8-213ENST00000557364 IL15P40933 162 aaPredicted RBP9.65□□□□□ -0.87
CHD8-213ENST00000557364 IFI16Q16666 785 aaKnown RBP9.65□□□□□ -0.87
CHD8-213ENST00000557364 RBM17Q96I25 401 aaKnown RBP9.65□□□□□ -0.87
CHD8-213ENST00000557364 BOLA2Q9H3K6 86 aa9.65□□□□□ -0.87
CHD8-213ENST00000557364 TBCAO75347 108 aaKnown RBP9.64□□□□□ -0.87
CHD8-213ENST00000557364 GRIPAP1Q4V328 841 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 LEKR1Q6ZMV7 388 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 FLAD1Q8NFF5 587 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 ASXL1Q8IXJ9 1541 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 SHANK2Q9UPX8 1470 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 SPINK5Q9NQ38 1064 aaPredicted RBP9.64□□□□□ -0.87
CHD8-213ENST00000557364 ADAMTS12P58397 1594 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 TSPY3P0CV98 308 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 TSPY8P0CW00 308 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 MAP9Q49MG5 647 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 KIAA0556O60303 1618 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 GOLIM4O00461 696 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 GPTP24298 496 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 GLT8D2Q9H1C3 349 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 EXOC6BQ9Y2D4 811 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 MCM5P33992 734 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 SSX2IPQ9Y2D8 614 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 SAMM50Q9Y512 469 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 SYCP2Q9BX26 1530 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 STX6O43752 255 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 PARP10Q53GL7 1025 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 UBE3BQ7Z3V4 1068 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
CHD8-213ENST00000557364 ZNF608Q9ULD9 1512 aaPredicted RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 PBRM1Q86U86 1689 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 MYCNP04198 464 aaPredicted RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 PPM1FP49593 454 aaPredicted RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 SYCP3Q8IZU3 236 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 BABAM1Q9NWV8 329 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 UBA7P41226 1012 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 LRSAM1Q6UWE0 723 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 CALML3P27482 149 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 MAP3K9P80192 1104 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 ARID3AQ99856 593 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 CFAP65Q6ZU64 1925 aaKnown RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 ABCC1P33527 1531 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 MAP4K4O95819 1239 aaPredicted RBP9.63□□□□□ -0.87
CHD8-213ENST00000557364 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 C6orf50Q9HD87 102 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 LIMCH1Q9UPQ0 1083 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 ADGRF5Q8IZF2 1346 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 RTL9Q8NET4 1388 aa9.63□□□□□ -0.87
CHD8-213ENST00000557364 ATP10AO60312 1499 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 CHMP4BP1P59074 171 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 TRAPPC3LQ5T215 181 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 KIAA0754O94854 1291 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 ACTN2P35609 894 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 ATP2B3Q16720 1220 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 USHBP1Q8N6Y0 703 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 NAA15Q9BXJ9 866 aaKnown RBP9.62□□□□□ -0.87
CHD8-213ENST00000557364 IMPG2Q9BZV3 1241 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 TBX22Q9Y458 520 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 NUTM1Q86Y26 1132 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 CCDC82Q8N4S0 544 aa9.62□□□□□ -0.87
CHD8-213ENST00000557364 SREK1Q8WXA9 508 aaKnown RBP9.62□□□□□ -0.87
CHD8-213ENST00000557364 ZSCAN16Q9H4T2 348 aaPredicted RBP9.62□□□□□ -0.87
CHD8-213ENST00000557364 NIP7Q9Y221 180 aaKnown RBP eCLIP9.62□□□□□ -0.873e-20■■■■■ 33.4
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms