RNA–Protein interactions for RNA: ENST00000557344.5

APEX1-218, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-218ENST00000557344 CC2D2BQ6DHV5 1058 aa13.52□□□□□ -0.25
APEX1-218ENST00000557344 USP50Q70EL3 339 aaPredicted RBP13.52□□□□□ -0.25
APEX1-218ENST00000557344 MCOLN1Q9GZU1 580 aa13.52□□□□□ -0.25
APEX1-218ENST00000557344 COL4A5P29400 1685 aa13.51□□□□□ -0.25
APEX1-218ENST00000557344 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
APEX1-218ENST00000557344 FAM177BA6PVY3 158 aa13.51□□□□□ -0.25
APEX1-218ENST00000557344 CA12O43570 354 aa13.51□□□□□ -0.25
APEX1-218ENST00000557344 CRY2Q49AN0 593 aa13.51□□□□□ -0.25
APEX1-218ENST00000557344 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
APEX1-218ENST00000557344 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
APEX1-218ENST00000557344 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
APEX1-218ENST00000557344 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
APEX1-218ENST00000557344 GRIPAP1Q4V328 841 aa13.49□□□□□ -0.25
APEX1-218ENST00000557344 NBPF10Q6P3W6 841 aaKnown RBP13.49□□□□□ -0.25
APEX1-218ENST00000557344 SAPCD2Q86UD0 394 aa13.49□□□□□ -0.25
APEX1-218ENST00000557344 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
APEX1-218ENST00000557344 CFAP44Q96MT7 982 aa13.49□□□□□ -0.25
APEX1-218ENST00000557344 TRPM7Q96QT4 1865 aa13.48□□□□□ -0.25
APEX1-218ENST00000557344 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
APEX1-218ENST00000557344 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
APEX1-218ENST00000557344 HLFQ16534 295 aa13.48□□□□□ -0.25
APEX1-218ENST00000557344 LARGE2Q8N3Y3 721 aa13.48□□□□□ -0.25
APEX1-218ENST00000557344 HHIPL1Q96JK4 782 aa13.48□□□□□ -0.25
APEX1-218ENST00000557344 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
APEX1-218ENST00000557344 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
APEX1-218ENST00000557344 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
APEX1-218ENST00000557344 ABCC12Q96J65 1359 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 CASP8AP2Q9UKL3 1982 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 CELF2O95319 508 aaKnown RBP13.46□□□□□ -0.25
APEX1-218ENST00000557344 DGKZQ13574 1117 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 NIM1KQ8IY84 436 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 NYXQ9GZU5 481 aa13.46□□□□□ -0.25
APEX1-218ENST00000557344 ADARB2Q9NS39 739 aaKnown RBP13.46□□□□□ -0.25
APEX1-218ENST00000557344 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
APEX1-218ENST00000557344 RPGRQ92834 1020 aaKnown RBP13.45□□□□□ -0.26
APEX1-218ENST00000557344 CFAP53Q96M91 514 aa13.45□□□□□ -0.26
APEX1-218ENST00000557344 RSPH6AQ9H0K4 717 aa13.45□□□□□ -0.26
APEX1-218ENST00000557344 PGAP2Q9UHJ9 254 aa13.45□□□□□ -0.26
APEX1-218ENST00000557344 CIAPIN1Q6FI81 312 aa13.44□□□□□ -0.26
APEX1-218ENST00000557344 CRAMP1Q96RY5 1269 aa13.44□□□□□ -0.26
APEX1-218ENST00000557344 GLIS2Q9BZE0 524 aaPredicted RBP13.44□□□□□ -0.26
APEX1-218ENST00000557344 PDE4DIPQ5VU43 2346 aa13.44□□□□□ -0.26
APEX1-218ENST00000557344 ERVV-1B6SEH8 477 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
APEX1-218ENST00000557344 PPIP5K2O43314 1243 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 CXCL9Q07325 125 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 RIC1Q4ADV7 1423 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 VPS33BQ9H267 617 aa13.43□□□□□ -0.26
APEX1-218ENST00000557344 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
APEX1-218ENST00000557344 NOGQ13253 232 aa13.42□□□□□ -0.26
APEX1-218ENST00000557344 AOC3Q16853 763 aa13.42□□□□□ -0.26
APEX1-218ENST00000557344 MCM10Q7L590 875 aa13.42□□□□□ -0.26
APEX1-218ENST00000557344 ZC3H15Q8WU90 426 aaKnown RBP13.42□□□□□ -0.26
APEX1-218ENST00000557344 RBM17Q96I25 401 aaKnown RBP13.42□□□□□ -0.26
APEX1-218ENST00000557344 ZIC5Q96T25 663 aa13.42□□□□□ -0.26
APEX1-218ENST00000557344 DLG5Q8TDM6 1919 aa13.41□□□□□ -0.26
APEX1-218ENST00000557344 TNRC18O15417 2968 aaPredicted RBP13.41□□□□□ -0.26
APEX1-218ENST00000557344 GMPSP49915 693 aaPredicted RBP13.41□□□□□ -0.26
APEX1-218ENST00000557344 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
APEX1-218ENST00000557344 RTF1Q92541 710 aaKnown RBP13.41□□□□□ -0.26
APEX1-218ENST00000557344 ZNF408Q9H9D4 720 aa13.41□□□□□ -0.26
APEX1-218ENST00000557344 ZNRF3Q9ULT6 936 aa13.41□□□□□ -0.26
APEX1-218ENST00000557344 NUDCQ9Y266 331 aa13.41□□□□□ -0.26
APEX1-218ENST00000557344 IBTKQ9P2D0 1353 aaPredicted RBP13.41□□□□□ -0.26
APEX1-218ENST00000557344 MAP3K15Q6ZN16 1313 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
APEX1-218ENST00000557344 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
APEX1-218ENST00000557344 SUSD4Q5VX71 490 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 CDC37L1Q7L3B6 337 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 NGEFQ8N5V2 710 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 RTFDC1Q9BY42 306 aaPredicted RBP13.4□□□□□ -0.26
APEX1-218ENST00000557344 ATP6V0A2Q9Y487 856 aa13.4□□□□□ -0.26
APEX1-218ENST00000557344 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
APEX1-218ENST00000557344 GPTP24298 496 aa13.39□□□□□ -0.27
APEX1-218ENST00000557344 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
APEX1-218ENST00000557344 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
APEX1-218ENST00000557344 TTLL7Q6ZT98 887 aa13.39□□□□□ -0.27
APEX1-218ENST00000557344 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
APEX1-218ENST00000557344 NTSR2O95665 410 aa13.38□□□□□ -0.27
APEX1-218ENST00000557344 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
APEX1-218ENST00000557344 ZNF34Q8IZ26 560 aa13.38□□□□□ -0.27
APEX1-218ENST00000557344 SUPT20HQ8NEM7 779 aa13.38□□□□□ -0.27
APEX1-218ENST00000557344 TRPM4Q8TD43 1214 aa13.38□□□□□ -0.27
APEX1-218ENST00000557344 TMX4Q9H1E5 349 aaPredicted RBP13.38□□□□□ -0.27
APEX1-218ENST00000557344 NUP98P52948 1817 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 SOX10P56693 466 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 HUNKP57058 714 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 TNIP1Q15025 636 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 KIF6Q6ZMV9 814 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 USP48Q86UV5 1035 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 SAGE1Q9NXZ1 904 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 MIS18AQ9NYP9 233 aa13.37□□□□□ -0.27
APEX1-218ENST00000557344 FAM155AB1AL88 458 aaPredicted RBP13.36□□□□□ -0.27
APEX1-218ENST00000557344 RAD17O75943 681 aa13.36□□□□□ -0.27
APEX1-218ENST00000557344 KIAA2012Q0VF49 1180 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms