RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 PSMD1Q99460 953 aa20.46■□□□□ 0.87
SUPT16H-205ENST00000556217 CCDC85CA6NKD9 419 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 FZD9O00144 591 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 RGS19P49795 217 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 CRY2Q49AN0 593 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 GPC2Q8N158 579 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 RPGRQ92834 1020 aaKnown RBP20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 MAP3K15Q6ZN16 1313 aa20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
SUPT16H-205ENST00000556217 ADAMTSL1Q8N6G6 1762 aa20.44■□□□□ 0.86
SUPT16H-205ENST00000556217 GRIPAP1Q4V328 841 aa20.44■□□□□ 0.86
SUPT16H-205ENST00000556217 NUTM1Q86Y26 1132 aa20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 RNF123Q5XPI4 1314 aa20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 ABCC12Q96J65 1359 aa20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 IBTKQ9P2D0 1353 aaPredicted RBP20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 RIC1Q4ADV7 1423 aa20.43■□□□□ 0.86
SUPT16H-205ENST00000556217 EIF6P56537 245 aaKnown RBP20.42■□□□□ 0.86
SUPT16H-205ENST00000556217 CNTROBQ8N137 903 aa20.42■□□□□ 0.86
SUPT16H-205ENST00000556217 PNNQ9H307 717 aaKnown RBP20.42■□□□□ 0.86
SUPT16H-205ENST00000556217 HOXA10P31260 410 aaPredicted RBP20.41■□□□□ 0.86
SUPT16H-205ENST00000556217 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
SUPT16H-205ENST00000556217 BEGAINQ9BUH8 593 aa20.41■□□□□ 0.86
SUPT16H-205ENST00000556217 ABT1Q9ULW3 272 aaKnown RBP20.41■□□□□ 0.86
SUPT16H-205ENST00000556217 MYL6BP14649 208 aa20.4■□□□□ 0.86
SUPT16H-205ENST00000556217 LMOD1P29536 600 aaPredicted RBP20.4■□□□□ 0.86
SUPT16H-205ENST00000556217 NFE2L2Q16236 605 aa20.4■□□□□ 0.86
SUPT16H-205ENST00000556217 TTLL7Q6ZT98 887 aa20.4■□□□□ 0.86
SUPT16H-205ENST00000556217 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
SUPT16H-205ENST00000556217 GPTP24298 496 aa20.39■□□□□ 0.85
SUPT16H-205ENST00000556217 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.85
SUPT16H-205ENST00000556217 RBM17Q96I25 401 aaKnown RBP20.39■□□□□ 0.85
SUPT16H-205ENST00000556217 ZBTB3Q9H5J0 574 aa20.39■□□□□ 0.85
SUPT16H-205ENST00000556217 GJA3Q9Y6H8 435 aa20.39■□□□□ 0.85
SUPT16H-205ENST00000556217 ERBB4Q15303 1308 aa20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 MAPK8IP3Q9UPT6 1336 aa20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 LARGE2Q8N3Y3 721 aa20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 CRAMP1Q96RY5 1269 aa20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 PLEKHF1Q96S99 279 aa20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 TMX4Q9H1E5 349 aaPredicted RBP20.38■□□□□ 0.85
SUPT16H-205ENST00000556217 UBN2Q6ZU65 1347 aa20.37■□□□□ 0.85
SUPT16H-205ENST00000556217 SUSD4Q5VX71 490 aa20.37■□□□□ 0.85
SUPT16H-205ENST00000556217 PPP1R42Q7Z4L9 355 aa20.37■□□□□ 0.85
SUPT16H-205ENST00000556217 PPEF1O14829 653 aaPredicted RBP20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 ECE1P42892 770 aa20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 PARP10Q53GL7 1025 aa20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 GIGYF2Q6Y7W6 1299 aaKnown RBP20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 ZNF34Q8IZ26 560 aa20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
SUPT16H-205ENST00000556217 CAPNS2Q96L46 248 aa20.35■□□□□ 0.85
SUPT16H-205ENST00000556217 DDX21Q9NR30 783 aaKnown RBP eCLIP20.35■□□□□ 0.85
SUPT16H-205ENST00000556217 NTSR2O95665 410 aa20.34■□□□□ 0.85
SUPT16H-205ENST00000556217 NIM1KQ8IY84 436 aa20.34■□□□□ 0.85
SUPT16H-205ENST00000556217 NLRP3Q96P20 1036 aa20.34■□□□□ 0.85
SUPT16H-205ENST00000556217 COL4A5P29400 1685 aa20.34■□□□□ 0.85
SUPT16H-205ENST00000556217 PAXIP1Q6ZW49 1069 aaPredicted RBP20.33■□□□□ 0.85
SUPT16H-205ENST00000556217 GPR101Q96P66 508 aaPredicted RBP20.33■□□□□ 0.85
SUPT16H-205ENST00000556217 TSPYL4Q9UJ04 414 aa20.33■□□□□ 0.85
SUPT16H-205ENST00000556217 TCERG1O14776 1098 aaKnown RBP20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 SCNN1DP51172 638 aa20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 USP50Q70EL3 339 aaPredicted RBP20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 VPS33BQ9H267 617 aa20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 LTBP1Q14766 1721 aa20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 TRPM7Q96QT4 1865 aa20.32■□□□□ 0.84
SUPT16H-205ENST00000556217 PDE4DIPQ5VU43 2346 aa20.31■□□□□ 0.84
SUPT16H-205ENST00000556217 PPIP5K2O43314 1243 aa20.31■□□□□ 0.84
SUPT16H-205ENST00000556217 CFAP44Q96MT7 982 aa20.31■□□□□ 0.84
SUPT16H-205ENST00000556217 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
SUPT16H-205ENST00000556217 EPS15P42566 896 aa20.3■□□□□ 0.84
SUPT16H-205ENST00000556217 GRM1Q13255 1194 aa20.3■□□□□ 0.84
SUPT16H-205ENST00000556217 SUPT20HQ8NEM7 779 aa20.3■□□□□ 0.84
SUPT16H-205ENST00000556217 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
SUPT16H-205ENST00000556217 ANKRD36CQ5JPF3 1778 aa20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 EIF2S2P20042 333 aaKnown RBP20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 CYP4F22Q6NT55 531 aa20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 C3orf67Q6ZVT6 689 aa20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 BABAM1Q9NWV8 329 aa20.29■□□□□ 0.84
SUPT16H-205ENST00000556217 THSD7BQ9C0I4 1608 aa20.28■□□□□ 0.84
SUPT16H-205ENST00000556217 MAP2K2P36507 400 aa20.28■□□□□ 0.84
SUPT16H-205ENST00000556217 AOC3Q16853 763 aa20.28■□□□□ 0.84
SUPT16H-205ENST00000556217 HSP90AB3PQ58FF7 597 aa20.28■□□□□ 0.84
SUPT16H-205ENST00000556217 CA12O43570 354 aa20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 RIPK4P57078 832 aa20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 PDIA6Q15084 440 aa20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 ADARB2Q9NS39 739 aaKnown RBP20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 ZNRF3Q9ULT6 936 aa20.27■□□□□ 0.84
SUPT16H-205ENST00000556217 ABCC4O15439 1325 aa20.27■□□□□ 0.83
SUPT16H-205ENST00000556217 LAMB2P55268 1798 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 BBOX1O75936 387 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 LRP10Q7Z4F1 713 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 MCOLN1Q9GZU1 580 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 GPRC5DQ9NZD1 345 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 TSKSQ9UJT2 592 aa20.26■□□□□ 0.83
SUPT16H-205ENST00000556217 DPP8Q6V1X1 898 aaPredicted RBP20.25■□□□□ 0.83
SUPT16H-205ENST00000556217 RTFDC1Q9BY42 306 aaPredicted RBP20.25■□□□□ 0.83
SUPT16H-205ENST00000556217 TLL2Q9Y6L7 1015 aa20.25■□□□□ 0.83
SUPT16H-205ENST00000556217 CST9Q5W186 159 aa20.24■□□□□ 0.83
SUPT16H-205ENST00000556217 SLC51AQ86UW1 340 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms