RNA–Protein interactions for RNA: ENST00000555303.1

AC004828.1-201, humanhuman

TSL 3 BASIC

Gene AC004828.1, Length 654 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004828.1-201ENST00000555303 L3MBTL3Q96JM7 780 aaPredicted RBP11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 CRAMP1Q96RY5 1269 aa11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 DDX21Q9NR30 783 aaKnown RBP eCLIP11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 TRIM35Q9UPQ4 493 aa11.76□□□□□ -0.53
AC004828.1-201ENST00000555303 POTECB2RU33 542 aa11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 CALD1Q05682 793 aaKnown RBP11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 NEUROD2Q15784 382 aa11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 SUSD4Q5VX71 490 aa11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 KLRG1Q96E93 195 aa11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 RBM17Q96I25 401 aaKnown RBP11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 ADAMTS8Q9UP79 889 aa11.75□□□□□ -0.53
AC004828.1-201ENST00000555303 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 PROSER3Q2NL68 480 aa11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 UTP14AQ9BVJ6 771 aaKnown RBP11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 LRRC37AA6NMS7 1700 aa11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 DDX60Q8IY21 1712 aaKnown RBP11.74□□□□□ -0.53
AC004828.1-201ENST00000555303 DDNO94850 711 aaPredicted RBP11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 COPS6Q7L5N1 327 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 XAGE3Q8WTP9 111 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
AC004828.1-201ENST00000555303 FZD9O00144 591 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 NLRP10Q86W26 655 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 GPC2Q8N158 579 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 SYNE4Q8N205 404 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 CHMP4AQ9BY43 222 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 TMX4Q9H1E5 349 aaPredicted RBP11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 VPS33BQ9H267 617 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 LAS1LQ9Y4W2 734 aaKnown RBP11.72□□□□□ -0.53
AC004828.1-201ENST00000555303 ZNF541Q9H0D2 1346 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 ANXA1P04083 346 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 GNAI1P63096 354 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 AIMP1Q12904 312 aaKnown RBP11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 TCIRG1Q13488 830 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 OLFM4Q6UX06 510 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 PLBD2Q8NHP8 589 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 CHPF2Q9P2E5 772 aa11.71□□□□□ -0.53
AC004828.1-201ENST00000555303 SH3TC1Q8TE82 1336 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 ZNF853P0CG23 659 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 PNMA8AQ86V59 439 aaPredicted RBP11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 ATP6V0A2Q9Y487 856 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 COL4A5P29400 1685 aa11.7□□□□□ -0.54
AC004828.1-201ENST00000555303 ABCC4O15439 1325 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 BBOX1O75936 387 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 ZEB1P37275 1124 aaPredicted RBP11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 EIF6P56537 245 aaKnown RBP11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 HTRA3P83110 453 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 DUSP27Q5VZP5 1158 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 ANKRD13DQ6ZTN6 518 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 C3orf67Q6ZVT6 689 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 MBIPQ9NS73 344 aa11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 TRMT112Q9UI30 125 aaKnown RBP11.69□□□□□ -0.54
AC004828.1-201ENST00000555303 APAF1O14727 1248 aa11.68□□□□□ -0.54
AC004828.1-201ENST00000555303 EPHX2P34913 555 aa11.68□□□□□ -0.54
AC004828.1-201ENST00000555303 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
AC004828.1-201ENST00000555303 LARGE2Q8N3Y3 721 aa11.68□□□□□ -0.54
AC004828.1-201ENST00000555303 RTFDC1Q9BY42 306 aaPredicted RBP11.68□□□□□ -0.54
AC004828.1-201ENST00000555303 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 GOLGA2Q08379 1002 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 TRIM28Q13263 835 aaKnown RBP11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 GRAPQ13588 217 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 SP8Q8IXZ3 490 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 NIM1KQ8IY84 436 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 ISCA1Q9BUE6 129 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
AC004828.1-201ENST00000555303 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 TAF1P21675 1872 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 PPIP5K2O43314 1243 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 POTEIP0CG38 1075 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 POTEJP0CG39 1038 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 NCBP3Q53F19 620 aaKnown RBP11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 DPP8Q6V1X1 898 aaPredicted RBP11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 CACNA1FO60840 1977 aa11.66□□□□□ -0.54
AC004828.1-201ENST00000555303 MYH3P11055 1940 aa11.65□□□□□ -0.54
AC004828.1-201ENST00000555303 CCDC27Q2M243 656 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms