RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 CCDC173Q0VFZ6 552 aa15.27■□□□□ 0.04
PPP4R3A-206ENST00000554943 RILPL2Q969X0 211 aa15.27■□□□□ 0.04
PPP4R3A-206ENST00000554943 ANO2Q9NQ90 1003 aa15.27■□□□□ 0.04
PPP4R3A-206ENST00000554943 LRSAM1Q6UWE0 723 aa15.27■□□□□ 0.03
PPP4R3A-206ENST00000554943 PALLDQ8WX93 1383 aa15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 AK2P54819 239 aa15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 CCDC171Q6TFL3 1326 aa15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 XPCQ01831 940 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 PTPN12Q05209 780 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 NUP98P52948 1817 aa15.26■□□□□ 0.03
PPP4R3A-206ENST00000554943 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 PA2G4Q9UQ80 394 aaKnown RBP15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 COL9A3Q14050 684 aaPredicted RBP15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 CHAMP1Q96JM3 812 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 FUCA2Q9BTY2 467 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 TLR7Q9NYK1 1049 aaKnown RBP15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 LARGE1O95461 756 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 FOXO4P98177 505 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 PROSER2Q86WR7 435 aaPredicted RBP15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 SPG7Q9UQ90 795 aa15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
PPP4R3A-206ENST00000554943 ZNF609O15014 1411 aa15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 H7C1W4 665 aa15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 LIMCH1Q9UPQ0 1083 aa15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 ATP5JP18859 108 aa15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 CLASRPQ8N2M8 674 aaKnown RBP15.24■□□□□ 0.03
PPP4R3A-206ENST00000554943 BCORQ6W2J9 1755 aa15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 MBD3O95983 291 aa15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 HSP90AA1P07900 732 aaKnown RBP15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 PRIM1P49642 420 aaKnown RBP15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 NFATC2IPQ8NCF5 419 aa15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 DDX58O95786 925 aaKnown RBP15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 SNRPA1P09661 255 aaKnown RBP15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 USP16Q9Y5T5 823 aa15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 SLIT2O94813 1529 aa15.23■□□□□ 0.03
PPP4R3A-206ENST00000554943 WDR17Q8IZU2 1322 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 COL5A3P25940 1745 aaPredicted RBP15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 NBPF26B4DH59 902 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 NBPF14Q5TI25 921 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 NBPF10Q6P3W6 841 aaKnown RBP15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 NBPF15Q8N660 670 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 WDR33Q9C0J8 1336 aaKnown RBP15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 HIP1O00291 1037 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 PRPF40AO75400 957 aaKnown RBP15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 GPR108Q9NPR9 543 aa15.22■□□□□ 0.03
PPP4R3A-206ENST00000554943 MAP4K4O95819 1239 aaPredicted RBP15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 PLBD2Q8NHP8 589 aa15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 XAGE3Q8WTP9 111 aa15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 UPF3BQ9BZI7 483 aaKnown RBP15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 C14orf37Q86TY3 774 aa15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 AHDC1Q5TGY3 1603 aaPredicted RBP15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
PPP4R3A-206ENST00000554943 ESPNB1AK53 854 aa15.21■□□□□ 0.02
PPP4R3A-206ENST00000554943 ZSCAN22P10073 491 aaPredicted RBP15.21■□□□□ 0.02
PPP4R3A-206ENST00000554943 TATP17735 454 aaPredicted RBP15.21■□□□□ 0.02
PPP4R3A-206ENST00000554943 NASPP49321 788 aaPredicted RBP15.21■□□□□ 0.02
PPP4R3A-206ENST00000554943 ATG9AQ7Z3C6 839 aa15.21■□□□□ 0.02
PPP4R3A-206ENST00000554943 A0A0D9SFI3 127 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 SLC39A6Q13433 755 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 CAVIN1Q6NZI2 390 aaKnown RBP15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 FBXL16Q8N461 479 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 TIAM2Q8IVF5 1701 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 SH3TC1Q8TE82 1336 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 SLC27A2O14975 620 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 TOB2Q14106 344 aaPredicted RBP15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 TPRNQ4KMQ1 711 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 CWC27Q6UX04 472 aaKnown RBP15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 RUFY2Q8WXA3 655 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 SH2B1Q9NRF2 756 aaPredicted RBP15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 DBNLQ9UJU6 430 aaKnown RBP15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 MTMR6Q9Y217 621 aa15.2■□□□□ 0.02
PPP4R3A-206ENST00000554943 NMIQ13287 307 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 BRINP3Q76B58 766 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 ATG3Q9NT62 314 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 C9orf78Q9NZ63 289 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 RBM27Q9P2N5 1060 aaKnown RBP15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 TAF5LO75529 589 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 SYT1P21579 422 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 FAM227BQ96M60 508 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 DOT1LQ8TEK3 1739 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 ANKRD13DQ6ZTN6 518 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 HAUS7Q99871 368 aa15.19■□□□□ 0.02
PPP4R3A-206ENST00000554943 ME3Q16798 604 aa15.18■□□□□ 0.02
PPP4R3A-206ENST00000554943 TNNI3KQ59H18 835 aa15.18■□□□□ 0.02
PPP4R3A-206ENST00000554943 AACSQ86V21 672 aa15.18■□□□□ 0.02
PPP4R3A-206ENST00000554943 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms