RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 FAM83GA6ND36 823 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 FGRP09769 529 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 AK7Q96M32 723 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 CSF1RP07333 972 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 RCAN1P53805 252 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 FOXO4P98177 505 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 VGLL2Q8N8G2 317 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 SNX14Q9Y5W7 946 aa4.24□□□□□ -1.73
SEC23A-207ENST00000554615 COL2A1P02458 1487 aaPredicted RBP4.23□□□□□ -1.73
SEC23A-207ENST00000554615 ZNF536O15090 1300 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 IGKV5-2P06315 115 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 ATP5JP18859 108 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 NOVP48745 357 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 NBPF6Q5VWK0 638 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 MSL3Q8N5Y2 521 aaKnown RBP4.23□□□□□ -1.73
SEC23A-207ENST00000554615 NBPF4Q96M43 638 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 LLPHQ9BRT6 129 aaKnown RBP4.23□□□□□ -1.73
SEC23A-207ENST00000554615 DDX21Q9NR30 783 aaKnown RBP eCLIP4.23□□□□□ -1.73
SEC23A-207ENST00000554615 ROBO3Q96MS0 1386 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 SASH1O94885 1247 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 MX1P20591 662 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 KRT24Q2M2I5 525 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 SULT6B1Q6IMI4 303 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 KSR2Q6VAB6 950 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 OTUD7AQ8TE49 926 aaPredicted RBP4.23□□□□□ -1.73
SEC23A-207ENST00000554615 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
SEC23A-207ENST00000554615 NPHP3Q7Z494 1330 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ADAMTSL1Q8N6G6 1762 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 LCTP09848 1927 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 REC8O95072 547 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 PHKG2P15735 406 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 RRS1Q15050 365 aaKnown RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ZSCAN23Q3MJ62 389 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 RUFY3Q7L099 469 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 PLA2G4DQ86XP0 818 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ITPRIPQ8IWB1 547 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 UBXN6Q9BZV1 441 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 SLKQ9H2G2 1235 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 PHF8Q9UPP1 1060 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ERVV-2B6SEH9 535 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 FAM193AP78312 1265 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 TOB2Q14106 344 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 LRRCC1Q9C099 1032 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 SLC52A2Q9HAB3 445 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 HMG20BQ9P0W2 317 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 PALD1Q9ULE6 856 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 SSC5DA1L4H1 1573 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 RLFQ13129 1914 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 LETM1O95202 739 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 MBD3O95983 291 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ATG9AQ7Z3C6 839 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ERC1Q8IUD2 1116 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 UNC5CLQ8IV45 518 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 FAM177A1Q8N128 213 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 FAM184AQ8NB25 1140 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ENGASEQ8NFI3 743 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 LINS1Q8NG48 757 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 ANKRD7Q92527 254 aa4.22□□□□□ -1.73
SEC23A-207ENST00000554615 SH2B1Q9NRF2 756 aaPredicted RBP4.22□□□□□ -1.73
SEC23A-207ENST00000554615 HMMRO75330 724 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 TPM2P07951 284 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 RBM6P78332 1123 aaKnown RBP4.21□□□□□ -1.73
SEC23A-207ENST00000554615 HSP90AB4PQ58FF6 505 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 CHRDL2Q6WN34 429 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 FTSJ3Q8IY81 847 aaKnown RBP4.21□□□□□ -1.73
SEC23A-207ENST00000554615 KIF1BPQ96EK5 621 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 TMX3Q96JJ7 454 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 HAUS7Q99871 368 aa4.21□□□□□ -1.73
SEC23A-207ENST00000554615 ALX1Q15699 326 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 NT5DC1Q5TFE4 455 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 ZSCAN31Q96LW9 406 aaPredicted RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 METTL22Q9BUU2 404 aaPredicted RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 TMEM63CQ9P1W3 806 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 MTMR6Q9Y217 621 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 STK36Q9NRP7 1315 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 ZNFX1Q9P2E3 1918 aaKnown RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 BAZ2AQ9UIF9 1905 aaKnown RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 FNDC1Q4ZHG4 1894 aaPredicted RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 HIP1O00291 1037 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 FOXO3O43524 673 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 MYO1BO43795 1136 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 NPM3O75607 178 aaKnown RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 C16orf71Q8IYS4 520 aaPredicted RBP4.21□□□□□ -1.74
SEC23A-207ENST00000554615 RHPN1Q8TCX5 695 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 UBE2Q2Q8WVN8 375 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 GBP4Q96PP9 640 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 DSCC1Q9BVC3 393 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 EID1Q9Y6B2 187 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 SCN4AP35499 1836 aa4.21□□□□□ -1.74
SEC23A-207ENST00000554615 DICER1Q9UPY3 1922 aaKnown RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 NEURL1BA8MQ27 555 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 RESTQ13127 1097 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 HSCBQ8IWL3 235 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 TDRD7Q8NHU6 1098 aaKnown RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 TMX1Q9H3N1 280 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 DBF4Q9UBU7 674 aaPredicted RBP4.2□□□□□ -1.74
SEC23A-207ENST00000554615 CAVIN2O95810 425 aa4.2□□□□□ -1.74
SEC23A-207ENST00000554615 FGFR2P21802 821 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms